| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,027,203 | T→G | 6.4% | T191P (ACA→CCA) | yccT ← | UPF0319 family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,027,203 | 0 | T | G | 6.4% | 182.2 / 2.1 | 65 | T191P (ACA→CCA) | yccT | UPF0319 family protein |
| Reads supporting (aligned to +/- strand): ref base T (35/24); new base G (3/2); total (38/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01 | |||||||||||
CACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGTTGAGGTAATGGCGAGAATATCCAGCTTTACCGGAATCGGCGTCGCATCGCCATCCAACAATTCAAG > NC_000913/1026965‑1027428 | cacccGCCCAATTTGTTTCCGGGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCtgt < 1:843656/239‑1 (MQ=255) ccaGCGGAATATGTTGCCGGGCAGGTAAAGTGCGGGTCGGCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGa < 2:409134/239‑1 (MQ=255) cgcAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGCTGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTTGGAGCa > 2:898572/1‑238 (MQ=255) cgcAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGAATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTGGTTCTGTGAGCa > 2:333320/1‑238 (MQ=255) tttCCGCGGAGGTAAAGGTGGATTCTTCAGTTCCATAATGTACATCCGTAATTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTg < 1:436767/239‑1 (MQ=255) tttCCCCGCGGTAAAAGTGGGATTTGCCGGTTCCATAATGTACAACCGTTGTTAACTTTCCTACAAATTACGTTAAGCACTTAGTGGGGCAAGATAAAGACCGAAAACGCCGGCGCACAGGCACAAAAATCTCAGGAAGATGGGTGTTTTTCCTCCCCCGGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACTTGCGACTg < 1:557226/239‑1 (MQ=255) ttacgcgAAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTACCTTTCCTACAGCTTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGAATTTCGCGTTT‑TGGGTTACACCAGCTTACACCCAACATTCAACCGTTGTTCTGTGGGCACCTAAGGCTgg > 1:767871/4‑238 (MQ=255) ttCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCAAAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGAATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGGGACtcc > 2:93565/1‑237 (MQ=255) tcggcgcAGGTAATGTGTGAGTCGTCAGTCCCATAATGTACATCCGGATGTAACTTTCCCACAGATTGCTGTAAGCACTTATCGATGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCg < 1:773559/236‑1 (MQ=255) cgcAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCCGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCACAACTTCAGCCGTTGTTCTGTGAGCACCTGCAACTGCgggga > 1:175625/1‑236 (MQ=255) cgcAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTTCGGTgg > 2:262435/1‑239 (MQ=255) cgcAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGCGACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCCGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAACCCAATACTTCAGCCGTTGTTCTGGGAGCACCTGAGACTACGATgg > 2:324773/1‑239 (MQ=255) ggTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATCCTTCAGCCGTTGTTCTGTGAGAACCTGAGACTGCgtgggaga > 2:656572/1‑231 (MQ=255) agtcagattcttcAGTTCTATGATGTACATCCGTAGTTAACGTTCCTTCTGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAACCCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATc < 1:210929/228‑1 (MQ=255) aGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGAAAGATAAAGCACGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGCAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGAATTTCGGGTTTGTGGGTCA‑GCAAGTTTAAACCAATACTTAAGCCGTTGTTATGTAGGCCCCTGCGACTGCGTGGGaaaaagaaccagcgc > 1:572574/1‑226 (MQ=255) cggcAGTTCCATAATGTACCTCCGTAGTTAACTTTACTACAGATTACTGTAAGCCATTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCTCAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATGCTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGa < 2:704078/236‑1 (MQ=255) tcATTTCCATAATGTACCTCCGTAGTAAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGaaa < 1:470021/239‑1 (MQ=255) cATAATGTCCATTCGTTGTTAACTTTCCTACAGATTACTGTAAGCACTTATCACTGCAAGAAAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGa < 1:231956/239‑1 (MQ=255) tgtaactCCTTAATTAACTTTCCTACAGATTACTTGAAGCACTTAACGCTGCAAGATAAAGGCCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATGTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAagca < 1:285116/233‑1 (MQ=255) aacagcagTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAATACCGAAAAAGCCTGCGCACATGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGCATTTCGCGTTCGTGGGTAC‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTTACCACCTGTAACTGCGGTGGAAAAGCATCCAACCCGGGAACACCCGCAaacaac > 1:883566/8‑237 (MQ=255) ctcctttgTTAACTTTCCAACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAAGCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCAGCCAGCTCGGAAACACCCGAAAGCAGCGTa < 1:898572/232‑1 (MQ=255) aTCCGTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGCAAGAATTTCGCGTTTGTGGGTCG‑GCCAGTTTAAACCACTCCTTCAGCCGTTGTTCTGTGAGCTCCTGAGACTTCGCGGGAATAGCATCCACACAGGAAAAACCCaaaaaaacgtct > 1:60840/1‑231 (MQ=255) ccGTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAATCCTGCGCACAGGCACAAAAATCTCAGCAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGATTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCTTTGTTCTGTGAGCACCCGAGACTTCGGTGGAATa > 2:402105/1‑204 (MQ=255) tAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTg > 2:136133/1‑191 (MQ=255) tAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTg < 1:136133/191‑1 (MQ=255) tAACTTTCCTAAAGATTCTTGTAAGCCCTTAGTGCTGCAAGATAAAGCCCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTCTCCGCCCACTGCAGTAAAGTATTTCGCGTTTGTGGGTCA‑GGCAGGTTAACCCAATACTTCAGCCGTTGTTCTGTGAGCCCCAGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCAt < 1:749077/237‑1 (MQ=255) tCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCACTACTTCACCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGCATAGAATCCAGCTCGGAACCACCCGAAACCAGCGTACTGTCATCttcac > 2:344371/1‑233 (MQ=255) tgaaGCACTTATCGCTGAAAGATAAAGACCGAAAAAGCCTGCGCAAAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATTCTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTg < 1:333320/237‑1 (MQ=255) tAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCACCTCGGAAACACCCGAAAGCCGCGTAATGCCATATGCAACAACCGCGGCAAAATGc > 1:74665/1‑239 (MQ=255) aaGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTGAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGGGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCAGCATCGTGGCAAATTGCg < 1:572550/239‑1 (MQ=255) aGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGAc < 1:836018/162‑1 (MQ=255) aGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGAc > 2:836018/1‑162 (MQ=255) aGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCgg > 2:779871/1‑239 (MQ=255) aGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCgg > 2:680260/1‑239 (MQ=255) ttATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑TCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCCACTCGGAAACACCCGAAAGCAGCGTACTGTAATCTGCCTTCACCGTGGCAAATGGCGGGAgga > 1:384863/1‑237 (MQ=255) tATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTgaga > 1:27138/1‑155 (MQ=255) tATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTgaga < 2:27138/155‑1 (MQ=255) tATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGa > 2:716886/1‑239 (MQ=255) aaaGACCGAAAAAGCCTGCGCACAGGCACAAAATTCTCAGGGAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGGGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCgg < 1:554319/239‑1 (MQ=255) gAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAACGCCGGTTACTGGCATCTGCCATCATCGAGGCAAATTGCGAGAGGGAAACGGGttgccggggttgggt > 1:301266/1‑226 (MQ=255) gAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGGGAGCACCTGAGAc < 1:726777/135‑1 (MQ=255) gAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGGGAGCACCTGAGAc > 2:726777/1‑135 (MQ=255) aaaaaGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGCAAGCAGCGTACTGTCATCTGCCACCATCGTGGCAAATTGCGGGAGTGAAGCGCGGTTCCGGGAGTTTTta > 1:634110/1‑239 (MQ=255) aaaaaGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGGTTTGTta > 2:845862/1‑239 (MQ=255) acaGGCAAAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCt < 2:287077/239‑1 (MQ=255) caAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGGGGCAACTTCCGGTAGGGAAGCGCGTTTCGCGGATTTGTTAAAGCTTTCAAcccggacgcc > 1:114437/1‑231 (MQ=255) ctcAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGCCTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCACCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTCCCCGGATTTGTTATACGTTTAAACCCCGCCCTCacacaca > 1:18617/1‑233 (MQ=255) ggTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAACCAGTCGTTTTTg > 2:632404/1‑238 (MQ=255) tttttttCCGCCCACTGAAGGAAAGTATTTCGTGTTTGGGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCAACTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGt < 1:171340/237‑1 (MQ=255) ttCCCCCCCCTTGAGGAAAGTATTTCGGGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGGTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGTTGAgg < 1:845862/239‑1 (MQ=255) tGCAGGAAAGTATTGCGCGTTTGGGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGTTGAGGTAATGGCgag < 2:302302/239‑1 (MQ=255) aattttgtgtggtgtgtgGGACA‑CCCACTTTAAACCAAAACGTCCGGCGTTGTGCCGCGAGACCCCGAGAAGGCGTGGGAATAGCCCCCAGCTCGGAAACACCCGAAAGCAGCGTACGGTCATCGGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGATTTTGCCTTTGAGGTAATGGCGAGAATATc < 1:879000/224‑1 (MQ=255) tATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGCAACACCCGAAACCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGCATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGTTGCGTTAATGGCGGGACTATccc > 2:605722/1‑236 (MQ=255) tATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGATTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGTTGAGGCAATGGCGAGAATATCCa > 2:520387/1‑237 (MQ=255) tATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGAGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGAGGATTTGTTATAGCGTTCAACATCGACCTTATAATCATCCGTTTTTGCCGTTGAGGTATTGGCGGGAATAACCa > 2:59800/1‑237 (MQ=255) tttCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGTTGAGGTAATGGGGGGAAAAACAAGCtt > 1:846474/1‑239 (MQ=255) tttCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTAATCTGCCTTCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATACCGTTCACCCCCGACCTACTAATCAATCGTTTTTGCCGTTGCGGTAATGTCACGAACATCCACCtt > 2:837828/1‑239 (MQ=255) cgcgTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAag > 2:652048/1‑101 (MQ=255) cgcgTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAag < 1:652048/101‑1 (MQ=255) cgTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGTTGAGGTATTGGCGAGAATATCCAGCTTTACCg > 2:326237/1‑239 (MQ=255) tCA‑GCCAGTTTAAACCAATACTGCAGCCGTTGTTCTGGGGGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGTTGAGGTAATGGCGAGAATATCCAGCTTTACCGGAATCGGCg < 2:18617/238‑1 (MQ=255) gCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGTTGAGGTAATGGCGAGAATATCCAGCTTTAACGGAATCGGCGTc > 2:626346/1‑237 (MQ=255) ttAAACCAATGCTTCAGCCGTTGTTCGGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACATCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGTTGAGGTAATGGCGAGAATATCCAGCTTTACCGGAATCGGCGTCGCATCg < 2:767871/237‑1 (MQ=255) cAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGTTGAGGTAATGGCGAGAATATCCAGCTTTACCGGAATCGGCGTCGCATCGCCATCcaa < 2:634110/239‑1 (MQ=255) tACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGTTGAGGTAATGGCGCGAATATCCAGCTTTACCGGAATCggagcggacacgccacccaaaaa > 1:451704/1‑218 (MQ=255) gCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGTTGAGGTAATGTCGAGAATATCCAGCTTTACCGGAATCGGAGTCGCATCGCAATCCAACAATTCaaa > 2:93871/1‑237 (MQ=255) | CACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGTTGAGGTAATGGCGAGAATATCCAGCTTTACCGGAATCGGCGTCGCATCGCCATCCAACAATTCAAG > NC_000913/1026965‑1027428 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |