| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,466,393 | C→T | 11.3% | pseudogene (1002/2513 nt) | ydbA → | pseudogene, autotransporter homolog, interrupted by IS2 and IS30 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,466,393 | 0 | C | T | 11.3% | 100.7 / 4.5 | 51 | pseudogene (1002/2513 nt) | ydbA | pseudogene, autotransporter homolog, interrupted by IS2 and IS30 |
| Reads supporting (aligned to +/- strand): ref base C (24/20); new base T (3/3); total (27/24) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.52e-01 | |||||||||||
GCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG > NC_000913/1466155‑1466630 | gggATCTGGATGGCAACGGCGGCGGTCAAGGTATTGATATCACCGGTGGCAGGGCTACGGTGGATAACCAGGGCACCATGACCGTCCCCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCTAGAGCACCATCAGCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCGCGGCAAACAACAACGGCAAAACCTCCGTTGACGGc < 2:724311/237‑1 (MQ=255) tCAGGGGGGGCGTCCCCGGTTTTGATATCCCCGGGTACAGCGGGACCGGGGATAACAAGGGCCCCAGGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCAc < 1:675557/238‑1 (MQ=17) aGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCCCCGGCACCCAGATTAATGGTGATGACGCCACGGCAAAAAACAACGGCAAAACCACCGTTGACCGCAAGGATTCCACCgg > 2:842494/1‑239 (MQ=255) ggcggcggTCAAGGTATTGAAATGTCCGGTGAACGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGATAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTa < 2:854765/238‑1 (MQ=255) tGATATCACCGGTGACAGCGCGACGGTGGATAACCAGGGCACCATGACCGTCACCGACCCGCAGTCCATGGGGATCCAGATCGACGGCGACACGGCCATCGTCAATAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACCCAGATTAAAGGTGATGCAGCCACGGCAAACAACACCGGCAAAACCACCATTGAAGGCACGGATTCCACCGCTACGGCAATAAACggacaac > 1:259169/1‑234 (MQ=14) atCACCCGTGACCGGGCGACGGGGGATAACCAGGGGACCATGCCCGTCCCCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCCCCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACgg < 2:369237/239‑1 (MQ=18) cGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCCAACACCAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGAACGGAAATCACCGGAAATAACGGCAAAg > 2:858654/1‑239 (MQ=255) cGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGgaagg < 2:862592/239‑3 (MQ=255) tGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCAGGAGTCCATGGGTATCCAGATCGACGGTGACACGGCCATCGTCACTAACGCAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGGTAGGACGCCACGGCAAACAACAACGCCAAAACAACCGTTGACGGCAAGGATTCCACCGGCACGGAACTCAACGGTAATAACaaaaaaagaa > 1:735053/1‑235 (MQ=17) cgcgACGGTGGATAACAAGTGCACCATGCCCGTCACCGATCCGGGGTCCATAGGTATCCAGATCGACGGTGACCAGGCCATCGTCAATAACGAAAGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGGGATGACGCCACGGCAAAAAACAACGGAAAAACCCCCGGTGACGGCAGGGCTTCACCCGGCACGGAAATTAACGGAAATAACCGGAAAggaaataaga > 1:619982/1‑230 (MQ=255) ggggtttgtgaaaaCAAGGGCACCATGACCGTCACCGATCCTGCGGTCCTGGGTATCCAGAGCGACGGTAGCAAGGCCAAGGCAAATAACGGAGGCGAGAGCACCAAACACAACCGTGGCAGCGGCCTCCAGATTAAGGGTGATGATGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGa < 1:704708/227‑1 (MQ=17) cgggtgATAAAAAGGGTACCATGACCTTACCCGTTCCGGAGTCCATGGGTTTCCAGATCGACGGGTAAAAGGCCATCGGCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGACgg < 1:426388/233‑1 (MQ=18) cGGTGGATAACAAGGGCACCATGACCGTCACCGGTCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGACgg < 2:97730/238‑1 (MQ=255) ggTTGATAACCAGGGCCCCCTCCCCGTCACCGACCCGGAGTTCATGGGTCTCCAGATCGGAGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGTTGATGGCGGCGCGGGAAGTAACAACGGGAAAGCCACCGTTGACGGTAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGACGGCg < 1:282641/239‑1 (MQ=25) gCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATAAACGGAAATAACGGAAAAGGGA‑TTCAGGACGCGGACCTgggttcacgc > 2:843491/1‑231 (MQ=17) cATGACCGGCCCCTATCCGGGGGCCTTGGGTACCCAGATCGGCGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGGTA‑TTCAGGACGGCGATCTGGATGTCAgcggcg < 1:842494/239‑1 (MQ=18) tGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGACGGCGATCTGGATGTCAgcggcggc > 2:494290/1‑239 (MQ=255) cgtgaaggATGCGGTGTCAATGGGGAACAAGAGCGACGGGGAAAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGGCCCCTGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGt < 2:842806/231‑1 (MQ=18) aCCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGCGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCAACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGACGGCCATCTGGATGTCAGCCGCGGCGGCCACg > 2:364180/1‑238 (MQ=255) gAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGCAATAACGGAACAGTTA‑TTCAGCAAGGCGTCCCGAATGTCagcagcccgggtacgggtattaaaa > 2:724751/1‑219 (MQ=18) gAGTCCATGGGTATCCAGATCGACGGGGACAAGGCCATCGTCAATAACGCAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGACACGGCAAACACCACCGGCAAACCCACCCTTGACGGCAAGGATTCCACCGGTCCGAAAATAAAATGCAATAACGGAAAGGTTATTTGAGCAC‑GCGCCGTGGATGTCAGCGGCGGGCGGCACGGGAtgagca > 1:587283/1‑233 (MQ=255) cATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGCAATCAACGGTAATAACGCAAAAGTTA‑TTACGGACGGCGATCTGGATGTCACCGGCGCCGGTCCCGGCATTGagattccc > 2:468841/1‑234 (MQ=18) aTGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGCTAATAACGGAAAAGTTA‑TTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGGCACGGGATTGATTTAACCg > 2:807278/1‑238 (MQ=255) gTATCCAGATCGGTGGTGAAAAGGCCATCGGCAAAAACGAAGGCGAGAACCCGCACACCAACGGTGACCGCGGCACCCAGATTAAGGGTGATGACGCCACGGTAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGa < 2:786074/238‑1 (MQ=17) tCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCCGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGCCGGCGCCTTGGATGTAACCGACGGGGGGCACGGGATTGAAATCAACGGCGACaag > 1:854081/1‑237 (MQ=18) tCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTAACGGGATTGATATAACCGGccaacg > 2:856889/1‑233 (MQ=255) tccgtggTGAAAAGGGCATGCTCAAAAACGGAGGCGTGAGGTGCAACACCAACCGTGACCGCGGCCTTCAGATTACTGGTGATAACGCCACGGTAAACAACAACGGCAAAACCACCGTTGACGGTAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCaa < 2:422871/232‑1 (MQ=14) tCGACGGTGACAAGGCCAACGACAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCaa < 2:600731/237‑1 (MQ=255) cGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGCCACGGTATTGGTATACCCGGCGACAGCGCAACgg > 2:296980/1‑239 (MQ=255) aGGACATCGTCAATAAAGAAGGCGAGAGCACCATCACCAACGGTTGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAg < 2:735053/239‑1 (MQ=255) ccgtCGTCAATAACGAAGGCGAGAGGACCAACAACAACCGTTGCACCGGCCCCCGGATTAATGGGGATGAAGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAggg < 2:825209/235‑1 (MQ=17) aTCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATACCCGGCGCACGCCCAACGGTGGGAAAAAAgggaa > 2:261446/1‑236 (MQ=17) cGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGGAATAACGGAAAAGTTA‑TTCAGGACGGGGATCTAGATGTCAGCGGCGGCGGGCACGGGATTGGTATAAACGGCGCAAGCGCAAAGGGGGGAAAAAAggggagcc > 1:716532/1‑234 (MQ=14) cgaagggccgagCACCAACACCAACGGTGGACCCGGCCCCCAGATTAATGGTGATGACGCCACTGAAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGGCCGTCa < 2:755040/230‑1 (MQ=14) aGGCGAGGGCACCTTCCCCAACGGTCGAACCGGCACCCAGATTAAAGGAGAAGGCGCCACCGCAAACAACAACGGCAAAACCATCGTTGACGGGAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGACGGCGATCAGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCAcc < 1:364180/238‑1 (MQ=14) ggCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAGCGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCACCGGCAATAACGGGAAGGTTA‑TTCAGGACGGCGATCTGGAGGCCAGCGGCGGCGGGCCAGGTATTGAAATAACCGGCGCCAGCGACACGGGGGGTAACAAGGGCACCATAAACGACAcca > 1:346800/1‑237 (MQ=11) agCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGGATTGATATCACCGGCGACAGCGCAAAGGGGGGTAACAAGGGAACCATGACCGTCACCGATCCGGa > 2:830415/1‑239 (MQ=255) cATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGGGGATCACAAGGGCACCATGACCGTCACCGATCCCGAGccc > 2:417879/1‑238 (MQ=255) aCGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATc < 2:854081/239‑1 (MQ=255) accggcaccCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGGACGGAAATCAACGGTAATAACGGGAAAGTTA‑TTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGGAACGGGATTGAGATCACCGCCCACACGGCAACGGGGGAGAACAAGGGCACCAGGACCGACCCCGATCCGCGGGCCATCggcaccccacttaa > 1:715201/1‑227 (MQ=14) agttAATGGTGAAGAGGACACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAgg < 2:776380/237‑1 (MQ=255) aTTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCgcacaagc > 2:813074/1‑232 (MQ=255) tagtggggttgaCGCCACGGTAAACAACAATGGCAAAACCACCGTGGACGGTAAGGATTCCAGCGGTACGGAAAACAACGGTAATAACGGAAAAGTGA‑TTCAGGACGGCGATCTGGATTGCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCgg < 1:193843/230‑1 (MQ=14) atgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTTACGGGGCCCcggcgggtttttaa > 2:161692/1‑231 (MQ=255) aaaaaaCAACCCAAAAACCCCCGTGGCCCGCAAGGATTGCACCGGTTCGGAAATCAAACGTAAAAACGCAAAATATA‑TTCAGGACGGCGAGCTGGATTGCGTCGGAGGCGGTCACGGTATGTATAGCACCGGCTGCAGCGCAACGGTGGATAACAAGGGCGCCATGACCGTAACGGATCCGGAGGCCATCGGTAACCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCgag < 1:468841/238‑1 (MQ=255) aacaacaacGGCAAACCCTCCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCgaga < 2:183817/238‑1 (MQ=255) acaccGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAAGAACGGAAAAGTTA‑TTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGcc < 2:587283/239‑1 (MQ=255) tggCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGA‑TTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGGATTGATATCACCGGTGACAGCGCAACGGTGGATAACAAGGGCACCCTGACCGTCCCCGGACCGGGGGCCCTGGGGAGCCAGGACGCCGGGGACCAAGCCGATGTTAAAAAAGaaagggaaaaccacaaac > 1:41117/2‑223 (MQ=11) tggCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGA‑TTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCAAGGTATTGATATCACCGGTGACAGCGCGACGGTGGGTAACAAGGGGACCATGAACGTAACCGTTCCGGATTCCATTGGTGTCCCAGTAGACGGAGAACAGGCCGTTGTTaacaaacaaacagcaaacgcccta > 1:183817/2‑219 (MQ=11) cGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGACGGCGATCTGGATGTCAGCGCCGGCGGTCACGGAATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAAGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAAAAACGAAGGCGAGAACGCCATc > 2:259291/1‑238 (MQ=255) gCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGA‑TTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGGCCATGGGTATCCAGATTGCCGGGGACCAGACCGTCGGTaacaaaaaaagaggaagggacaaccca > 1:394406/1‑217 (MQ=11) cccacggtGACGGCAAAGATTCCCACGGTAAGGAAACCAACGGGAATAACGGAAAAGTTA‑TTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGt < 2:394406/232‑1 (MQ=17) cAAGGGTTCCCCCGGTACGGAAAACAACGGTAATAACGGAAAAGTTA‑TTCAGGACGGGCATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACg < 2:411935/238‑1 (MQ=255) cAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACg < 2:716532/238‑1 (MQ=255) | GCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTA‑TTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACG > NC_000913/1466155‑1466630 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |