| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,682,535 | A→C | 20.2% | V70G (GTG→GGG) | yphG ← | DUF4380 domain‑containing TPR repeat protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,682,535 | 0 | A | C | 20.2% | 104.1 / 3.7 | 61 | V70G (GTG→GGG) | yphG | DUF4380 domain‑containing TPR repeat protein |
| Reads supporting (aligned to +/- strand): ref base A (30/15); new base C (4/9); total (34/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.79e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTAATGACTTCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGTTTCATAGGTCGGGA‑TCTCAACG‑CGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCC > NC_000913/2682305‑2682750 | ccccccccGTCTGGGCCCCGTCTTCAGGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGAGGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTAATGACTTCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑Tg < 1:79006/233‑1 (MQ=255) acCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTAATGACTTCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTc > 2:635557/1‑239 (MQ=255) tCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTAATGACTTCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGACGGCCCAGTTCCGGCAGGTTAATAACTTTGA‑TGTATTCGtt > 2:723423/1‑238 (MQ=255) tCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTAATGACTTCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGttt > 2:86913/1‑239 (MQ=255) ccGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTAATGACTTCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGCCCCCGACCCCCCAGTTCCGGCAGGCTCATACCTTTGA‑TTGAGTCGTTTTCACGCca > 2:169203/1‑239 (MQ=255) ccGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTAATGACTTCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGG‑TGTAGTCGTTTTCCAGcc > 2:73349/1‑238 (MQ=255) ccGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTAATGACTTCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGAACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGcc > 2:629312/1‑238 (MQ=255) cGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTAATGACTTCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCCGGATCATCACTTTGA‑TGTAGTCGGTTTCCAGCcac > 2:79358/1‑239 (MQ=255) cGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGATTAATGACTTCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGTGCGATGCCACCCACCGCCCAGTTCCGGCCGGATCATCCCTTTGG‑TTGAGCCCTTTTCCAGCca > 1:625376/1‑238 (MQ=255) gTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTAATGACTTCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCCGTTCCGGCAGGACCATCACTTTGT‑TGTGTTCGTTTTCCAGCcac > 2:71752/1‑238 (MQ=255) tCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAACGCTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGCAAATCCACAGCCCCCGCAGCCCCACCAGCGCAGGTTTACTGACTTCATTGTGCTAAACCAAATCGCGCTGGTTCCCTTTATCCCACGCGCGTGCCATCCACACGCCCAGTTCCCGCAGGACCATCACTTTGA‑TGAAGACGTTTACCACCcaca > 1:791217/1‑238 (MQ=255) tCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTAATGACTTCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCACCACCg > 2:234092/1‑238 (MQ=255) gttccggggggGAAAACAAGGGGCATAAAGGTGGTCGGGGGAGTGTGTTGGGCACAGGTAAACTCAATCCCACCGGAAACCCACGGCCCCAGCAGCCCCCCCAGGGCAGGTTTAATGACTGCATTGGGAAAACCAAAATCGCGCTGTTTCACTTTATCCCACCCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACCCCGCCGGCCa < 1:446272/232‑1 (MQ=255) cTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTAATGACTTCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCCCTTTGA‑TGCAGTCGTTTTCCAGCCACACCGCCTGCCAg > 2:446272/1‑239 (MQ=255) cTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTAATGACTTCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAg > 2:205540/1‑239 (MQ=255) aCGGGCATAAAGGGGGTCGGGCGATGATGTTGCGGCCAGTTAAACCCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTAATGACTTCAGTGTGATAAACAAAATCGCGGTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTg < 2:520264/239‑1 (MQ=255) ggtCGGGCGATGATGTTGCGGCCAGTTAAACTCCATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTCATGACTTCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGAACTCCCAGTTCCGGCAGGCTCATCACTTTGT‑AGTAGGCGTTTTCCAGCCACAACGCCTCCCCGCGTTTCAGGGttttttacccgcccacggaat > 1:39833/1‑222 (MQ=255) ggtCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTAATGACTTCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCTGTGCACCCGACCGCCCAGATCCGGCAGGATCATCCATTTCA‑TGTAGTCGTTTTcacgccccccccc > 1:668173/1‑189 (MQ=255) ggtCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTAATGACTTCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCACCGTa > 2:144777/1‑238 (MQ=255) ggtCGGGCAATGATGTTGCGGCCAGTTAAACCCAATCCCCCCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTAATGACTTCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTa < 2:136156/238‑1 (MQ=255) gtCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTAATGACTTCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAATCGTTTTACAGCCAAACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCCCAGCGTATc > 2:215608/1‑239 (MQ=255) gggtggtgTTGCGGCCAGTAAACCCCAATCCCCCCGAATATCCACGGCCCAAGCAGCCCCACCAGCCGAGGTTTAATGGTTTAATGGTGATAAACAAATTCGCGTTGTTTCACTTTACCCCACGGGCGGTGCCCCCGACCGCCCAGTTCCGGCAGGATAATCCCTTTGA‑GGTGGTCGTTTCCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCa < 1:164597/232‑1 (MQ=255) caatgatgTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTAATGACTTCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGCCCCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCa < 2:211175/236‑1 (MQ=255) tttttttcGGCCAGTTAATCTCAATCCCTCCGGAAACCCACGGCCCCAGTACCCCCCCCAGCGCAGTTTTAAGTACTTCATTGGGATAAACAAAACCGCGTTTTTTCACTTTATCCCTCGCGCGATGCCTCCGCCCGCCCAGTTCCGGCAGGATCATCCCTTTGA‑TGTATGCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCg < 1:79358/232‑1 (MQ=255) ttgtttGCGGCCCCTTTAACCCCACTCCACCCGAAATCCCCGGCCCCAGCCCCCCCCCCCCGGGAGGGTTAATGACTTCATTTTGAAAAACAAAAGCGCGCTTTTTCACTTTAGCCCACGCGCGATGCCCCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGG‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCg < 1:264967/235‑1 (MQ=255) tcgttggCGGCCATTTAAACCCAACCCCCCCGGAATCCCCCGGCCCAAGCACCCCCCCCCGCGCAGGTTTAATGTCTTCTGTTTTATAACCAAAACCCCGCTGTTTCCCTTTCCCCCACGCCCGATGCCCCCGACCGCCAAGTTCCGGCAGGATCATCCCTTTGA‑TGTAGTCGTTTCCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCg < 1:149061/233‑1 (MQ=255) atgTTGCGGCCATTTAACCCCAACCCCACCGGAAATCCCCGGCCCCAGAGGCCCCACAAGCGCAGGTTGAATGACTTCATTGTGATCAAAAAAATCGCGCTGTTTCACTTTCTCCCACGCGGGATGCCCCCGACCGCCAAGTCCCGGCAGGATCATCCCTTGGG‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCg < 1:98076/238‑1 (MQ=255) tttccGGCCAGTAAACCTCAATCCCACCGAAAAGCCAGGGCCCCGGCGGCCCCACCAGCGCTGGTTTAATGAATTCGTTGTGATAAACAAAATCCCGATGTTTACCTTTATCCCACGCGCGATGCACCCGCCCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACCCCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTa < 1:732106/234‑1 (MQ=255) tGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTAATGACTTCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCACCGTATCGGTCACGCCGGAggg > 2:558948/1‑239 (MQ=255) taaccccAACCCCCCCGGAAACCCACGGCCCAAGCAGCCCCACCGGCGCAGGTTTAATGACTTCATTGTGAAAAACAAAACCCGGTTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACcg < 2:863471/231‑1 (MQ=255) tAAACCCAACCCCCCCGAAAATCCACGCCCCCAGACCCCCCACCAGGCCAGGTTTAATGCCTTCATTGTGATAAACAAAATCGCGCTTTTTCACTTTATCCCACGCGGGATGCCCCCGCCCGCCCAGTTCCGGCCGGATCATCACTTTGA‑TGTGGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACcgcg < 1:86913/239‑1 (MQ=255) tCAATCCCCCCGGAAACCCACTGCCCCAGAAGCCCCACCAGGGCAGGTTTAATGACTTCATTGTGATAAACAAAATCGCGATGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGa < 2:17030/239‑1 (MQ=255) tCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTAATGACTTCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCGCGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGa < 2:437551/239‑1 (MQ=255) tCAACCCCCCCGGAAATCCCCGGCCCCGGCAGCCCCACCAGGTCAGGTTTAATGACTTCATTGTGATAAACAAAACCGCGCTGTTTCACTTTACCCCACGCGCGATGCCCCCGACCGCCCAGTTCCGGCAGGATCATCCCTTTGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGa < 2:149658/239‑1 (MQ=255) tCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTAATGACTTCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGa > 2:862947/1‑238 (MQ=255) tCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTAATGACTTCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCACCGTATCGGTCACGCCGTAGGGATAAACCGCGCGGGCCGa > 1:748787/1‑238 (MQ=255) tCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTAATGACTTCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGGTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCTCGCCGGACgg > 2:527635/1‑237 (MQ=255) agcagcCCCACCAGCGCAGGTTTAATGACTTCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAACCGCGCTTTTCCAg > 2:702250/1‑239 (MQ=255) cccccgcgtatttttAATGACTTTATGGTGAAAACCAAAATCCCGCTTTTTCACTTTAACCCACGGGCAAGGCCCCCGCCCCCCCAGTTCCGGCAGGATCTTCCTTTGGA‑TTGAGTCGTTTTCCAGCCCCACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATgg < 1:635557/227‑1 (MQ=255) ccccaGCTCAGGTTTAATGCCTGCTTGGGTATAAACAAAAGCGCCTTGTTTCCCTTTGCCCCCCCGGCGATGCCCCACACCGCACAGTTCCGTCAGGATCATCACTTTTA‑TGTAGCCGTTTTCCAGCCACACCGCCTGCCAGGATTGCAGGGTTTTCTGCGCGCTCAGCGTATCGGCCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACTCGATTTTCCAGGAACATgg < 1:558948/237‑1 (MQ=255) caccaGCGCAGTTTTAATGCCTTCATTGTGATAAACAAAACCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATgg < 2:748787/239‑1 (MQ=255) gccttcttTGTTAAAAAAAAACTCCCGTTTTTTCCTTTTTCCCCCCGCGGGATCCCCCCGCCCGCCAAGTCCCGGCCGGTTCATCACTTTGA‑TGTAGTCGTTTCCCAGCCACCCCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGcc < 1:144777/237‑1 (MQ=255) cTTCATTGGGAAAAACAAAACCGCGCTGTTTCACTTTATCCCACGGGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTGGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGccc < 2:706533/238‑1 (MQ=255) ttCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCCCACCGCCTGCCAGGTTTTCAGGGTTTTCTGCTCGCTCCACGTATCGGTCACGCCGTATGTGTCAACCTCGCCGGCCCATCCCGGATAAACCCGATTTTCCCGGAACATGGGGTGTAAATCCTGCGGCCCgg > 1:454009/1‑239 (MQ=255) ttCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGCTAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCgg > 2:39889/1‑239 (MQ=255) ttCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCGGTAAAACGCGATTTTCCAGGAACAAGGGAGGGATATCCTCCGGCCCgg > 1:1436/1‑239 (MQ=255) cATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGCTAAACCGCGCCGGACGATCCCTGCTAAACGCGATTTTCCGAGACCATGGGAGGTAAATCCTGCGGCCCggct > 2:777301/1‑237 (MQ=255) aaTCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGCTCCCTGATAAACGCGATTTTCCAGGAACATGGGAGGTATATCCTGCGGCCCGGGTTACTAGGCCGGGaa > 1:679603/1‑237 (MQ=255) aaTCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAAAATGGGAGGGAAATCCTGCGGCCCGGTTTCATAGGTggggga > 1:885710/1‑236 (MQ=255) cgcTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAACCGCGATTTTTCAGGGACATGGGAGGCGTATATATCGGCCCGGTTTccatagtagggatccaaaa > 1:357846/1‑221 (MQ=255) ttcccccCGCGGGTTGCCCCCGCCCGCCCAGTCCCGGCAGGGTCGTCTTTTTGA‑TGGCGGCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCCCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGTTTCATAGGTCGGGA‑TCTCAACG‑CGCTCTTGCcac < 1:39889/236‑1 (MQ=255) tCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGTTAGCTCAGCGTATCGGTCACGCCGTAGGGTTAAACCGCGCCCGACGATCCCTGATAAACGCGCTTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGCTGTCATCGGTCGGGACTCTC‑ACG‑CGATCTTGCcac > 2:349612/1‑237 (MQ=255) tCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGCGGTATATCCTGCGGCCCGGTTTCATAGGTCGGGA‑TCTCAACG‑CGCTCTTGCcac > 2:425231/1‑237 (MQ=255) tCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑GGTAGTCGTTTTCCAGCCACACCGCCGGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACCCCGCAGGGATAACACGCGCCGGACGCTCCCTGATAAACGCGTTTTTCCATGAACATGGGACGCATATCCTGCGGCCCGGTTTCCTAGGTCGGGG‑TCTCAACG‑CGCCCTTGCcac > 1:421448/1‑237 (MQ=255) gcgcctcacccccTACCCCCCAGTCCCGGACTGATCATCCTTTTGAGTGTAG‑CGGTTTCCACCCACACCCCCTGCCCGGGTTTCAGGGTTTTCTGCTCGCTCAGCGTTACGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGTTTCATAGGTCGGGA‑TCTCAACG‑CGCTCTTGCCACGCTTTTAc < 1:862947/229‑1 (MQ=255) ttGCACCCGTCCCCCCCTTTCCGCCATGATAATCTCTTTGA‑TGGTGTCGTTTTCCAGCCACCCCGCCTGCCAGGATTTCAGGGTTTTCTGCCCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGTTTCATAGGTCGGGA‑TCTCAACG‑CGCTCTTGCCACACTTTTACTGGAg < 1:205540/238‑1 (MQ=255) ccGACCGCCCAGTTCCGTGAGGTGTTTCTCTTGGT‑GGTAGTCGTTTTCCAGCCACCCCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGTTTCATAGGTCGGGA‑TCTCAACG‑CGCTCTTGCCACACTTTTACTGGAGTCATgg < 2:830219/239‑1 (MQ=255) ccccccccacttcccggggggATCGTCCTTTTGA‑TGGAGTCGTTTTCCAGCCGCCCCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGGTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGTTTCATAGGTCGGGA‑TCTCAACG‑CGCTCTTGCCACACTTTTACTGGAGTCATGGt < 1:757788/220‑1 (MQ=255) aCCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGCCGATCCCTGCTAAACGCGATTTTCCAGGAACATGGGATGAATTTCCTCCGGCCCGGTTTCCTTGGTCGGGA‑TCTCAACC‑CGCTCTTGCCCCACTTTTTCTGGGGTctggggt > 1:559524/1‑232 (MQ=255) aCCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGGTAAACGCGATTTTCACGGAACATGGGAGGTATATCCTGCGGCCCGGTTTATGAGGCCGGGA‑TCTCAACGCCGCT‑TTGCCCCACTTTTACTGGGGACgtggtg > 1:864429/1‑238 (MQ=255) cGCCCAGTTCCGGCAGGATCATCCTTTTGA‑TGTAGTTGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGTTTCATAGGTCGGGA‑TCTCAACG‑CGCTCTTGCCACACTTTTACTGGAGTCATGGTGccc < 2:885710/239‑1 (MQ=255) | CCCACACCGTCTGTGCACCGTCTTCATGGGCTTCGAGGGTGAAATCAACGGGCATAAAGGTGGTCGGGCGATGATGTTGCGGCCAGTTAAACTCAATCCCACCGGAAATCCACGGCCCCAGCAGCCCCACCAGCGCAGGTTTAATGACTTCATTGTGATAAACAAAATCGCGCTGTTTCACTTTATCCCACGCGCGATGCACCCGACCGCCCAGTTCCGGCAGGATCATCACTTTGA‑TGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGTTTCATAGGTCGGGA‑TCTCAACG‑CGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCC > NC_000913/2682305‑2682750 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |