| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,479,687 | G→A | 15.6% | L307F (CTC→TTC) | kefB ← | potassium:proton antiporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,479,687 | 0 | G | A | 15.6% | 138.1 / 3.8 | 61 | L307F (CTC→TTC) | kefB | potassium:proton antiporter |
| Reads supporting (aligned to +/- strand): ref base G (32/19); new base A (2/8); total (34/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.71e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGCTTCATCAGCAACGGCGTGGTCATCATGGAAAGCGTCACCGTCACCAGCAACAACGCCATCTGGTCGCCCTG‑GAATAAGCGTTGTGAAGAAGCGGTAGAAAAGAGGACAAAGGCAAACTCACCACCCTGACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCG > NC_000913/3479482‑3479922 | cgttctacaaGCATCGGCTGGGTCATAATGTCAAGCGCTCCCGTCACCAGCACCACGCCCATTGGGTTCCCCTG‑AAATAAGTTTTTTGAAGACGCGGTAAAAAAGAGGACAAAGGCAACCTCACCACCCGGTCTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATTCAACAGCGCCACCAGTCACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTAt < 1:558703/230‑1 (MQ=255) tcaGCAACGGGGTGGTCAACAGGGAAAGCGTCACCGTCACCAGCAACAACGCCATCTGGTCGCCCGG‑GAATAAGCGTTGTGAAGAAGCGGTAGAAAAGAGGACAAAGGCAAACTCACCACCCTGACCCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTAcc < 2:768163/239‑1 (MQ=255) cgagcacggggttGGTCTTCTGGGAAAGCGTACCCTTCCCCAGCAACAACGCCATCTGGTCCCCCGG‑GAAAAAGCGTTGGGAAGAGGGGGAAAAAAAGGGAACAAAGGCAAACCCCCCCCCCTGCCTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTAcc < 1:421476/227‑1 (MQ=255) cAACGGCGTGGTCATCATGGAAAGCGTCACCGTCACCAGCAACAACGCCATCTGGTCGCCCTG‑GAATAAGCGTTGTGAAGAAGCGGTAGAAAAGAGGACAAAGGCAAACTCACCACCCTGACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAAAATTTTCACCGCCACCAGCCCAACCACCCTTATCACTACCcaca > 2:149954/1‑239 (MQ=255) cGGCGTGGTCATCATGGAAAGCGTCACCGTCACCAGCAACAACGCCATCTGGTCGCCCTG‑GAATAAGCGTTGTGAAGAAGCGGTAGAAAAGAGGACAAAGGCAAACTCACCACCCTGACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTTACCTCCGCACGCCATCCAATCCCGCCAGCAGAACCAGCCCCAAAATTTTCACCCCCCCCACCCCAACCACCCCTAacacccacccaaaaa > 1:581869/1‑228 (MQ=255) cttGGTCATAATGGAAAGCGTCACCGTCACCAGCAACAACGCCATGTGGTCGCCCTG‑GAATAAGCGTTTGGAAAAAGCGGTAGAAAAGAGGACAAAGGCAAACTCCCCACCCTGCCTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTCCGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGa < 2:47845/236‑1 (MQ=255) gTCATCATGGAAAGCGTCACCGTCACCAGCAACAACGCCATCTGGTCGCCCTG‑GAATAAGCGTTGTGAAGAAGCGGTAGAAAAGAGGACAAAGGCAAACTCACCACCCTGACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCCCGAGAATTTTCACCGCCACCAGCACAACCACGCTTATACCTACCCccaaccaatgct > 2:421476/1‑231 (MQ=255) gctccacgaacagctgccccgtcacaACAAACAACGGCATCTGGGCGCCAGG‑AAAAAAGCTTGGATAAAAACCGATAGAAAAGAGGAAAACGGCAACCCGCCCACCCTGGCGCAAC‑CGTCAACAAAA‑CTGCACCCGCTCTTGGTTACGCACGCCTAACAATCGCGCTAGCACTTACAGCACGAGAATTATCGCCGCCACCAGCAAAACCCCGCTTATCACTACCCACAACAGATGGGt < 1:621020/220‑1 (MQ=255) atgcaaggctccacctcccccAGCAACACCTCCTTGTGGTCGCCCGG‑GAAAAAGCTTGGAAAAGAGGCGGTGTAAAGAAGGACAAA‑GCAAAACCACCCCCCTGCACCAACACGCCCGC‑AAACCTCCATCCGCCTTAAGCCACGCACGCCATACAACCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAg < 1:304394/220‑1 (MQ=255) atGGAAAGCGTCACCGTCACCAGCAACAACGCCATCTGGTCGCCCTG‑GAATAAGCGTTGTGAAGAAGCGGTAGAAAAGAGGACAAAGGCAAACTCACCACCCTGACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCAATACAATCGCGCCAGCAGATACAGCCCGAGACTTTTCACCGCCCCCACCACAACCACGCTTATCACCACCCccaaaaaaagggaaaaaa > 1:446437/1‑224 (MQ=255) aaGCGTCACCGTCACCAGCAACAACGCCATCTGGTCCCCCTG‑GAATAAGCGTTGTGAAGAAGCGGTAGAAAAGAGGACAAAGGCAAACTCACCCCCCTGACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCAcc < 2:206042/238‑1 (MQ=255) cgtcaccgtcacCAGCAACAACGCCATCTGGTCGCCCTG‑GAATAAGCGTTGTGAAGAAGCGGTAGAAAAGAGGACAAAGGCAAACTCACCACCCTGACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCAATCCAATCGCGCAAGCAAACACAGCACGAGAATTTCAACCGCCACCAGACCCACCCAGCTTATCACCACCAACAAAAAAAGGGCCAAAAACAcccccc > 1:222948/1‑237 (MQ=255) gtcacggtcaccACAAACAACGACTTCGGGTCGCCCTG‑GAATAAGCGTTGTGAAGAAGCGGTAGAAAAGAGGAAAAAGGCAAACTCCCCACCCTGACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGATCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGa < 2:563624/238‑1 (MQ=255) ctcccgccccccacacaacaccccATCTGGTC‑CGCTGTGAACAAGCGTTGGAAAAAAGCGGTAAAAAAAGGGAAAAAGGCAACCCCCCCCCCCGGCCCCAACCCCCCAGC‑AAA‑CTGCTCCCGTTCTGAGCTCCGCACGCCATCAAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGa < 1:687335/216‑1 (MQ=255) accgtcaccAGCAACAACGCCATCTGGTCGCCCTG‑GAATAAGCGTTGTGAAGAAGCGGTAGAAAAGAGGACAAAGGCAAACTCACCACCCTGACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGCGCTACTCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCCCAACCCCGCTTATCACCAACCCCAAAAGATGGGAATAAAGCACCCAGaagat > 1:155767/1‑235 (MQ=255) accgtcaccAGCAACAACGCCATCTGGTCGCCCTG‑GAATAAGCGTTGTGAAGAAGCGGTAGAAAAGAGGACAAAGGCAAACTCACCACCCTGACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAAATGGGTATAAAGCACCCCGCGGtt > 2:889343/1‑239 (MQ=255) caacaaCGCCATCTGGTCGCCCTG‑GAATAAGCGTTGTGAAGAAGCGGTAGAAAAGAGGACAAAGGCAAACTCACCACCCTGACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGAATAAAGCACCCCGAGGTTGAGTGACATg > 2:214638/1‑238 (MQ=255) aacaacGCCATCTGGTCGCCCTG‑GAATAAGCGTTGTGAAGAAGCGGTAGAAAAGAGGACAAAGGCAAACTCACCACCCTGACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGAATAAAGCACCCCGAGGTTGAGTGACATGc > 2:518981/1‑238 (MQ=255) caacGCCAGCTGGTCCCCCTG‑GAAAAAGCGTTGTAAAGAAGCGGTAAAAAAGAGGACAAAGGCAAACTCACCACCCTGACCCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGa < 2:515008/239‑1 (MQ=255) ccgcagtgggTCGCCCTG‑AAAAAAGGTTTGTAAAGAAGCGGTAGAAAAGAGGACAAAGGCAAACTCCCCACCCTGACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACag < 2:196396/231‑1 (MQ=255) aTCTGGTCGCCCTG‑GAATAAGCGTTGTGAAGAAGCGGTAGAAAAGAGGACAAAGGCAAACTCACCACCCTGACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCCCAACCACGCTTATCACTACCCACAACATATGGTCATAAAGCACCCCGAGGTTGAGTGCCATGCCGACagaaga > 2:850535/1‑236 (MQ=255) tCTGGTCGCCCTG‑GAATAAGCGTTGTGAAGAAGCGGTAGAAAAGAGGACAAAGGCAAACTCACCACCCTGACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCCCGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTGTAAAGCACCCCGAGGTTGAGTGACAGTCCGACAGAGATa > 2:736052/1‑239 (MQ=255) tgggccccacTG‑GAATAACGTTTTTGAAGAGGCGTTAGAAAAGAGGACAAAGGAAAACCCCCCCCCCTTACTACACAGCCCAGA‑AAA‑CTCCATCCGCTCTGAGCTCAGCACCCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATaa < 1:436610/230‑1 (MQ=255) tCGCCCTG‑GAATAAGCGTTGTGAAGAAGCGGTAGAAAAGAGGACAAAGGCAAACTCACCACCCTGACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACCGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAAAAGGGACAAAAGCAACCCGCGGTTGAGTGACATCGCGCCAGGAAAAAAGaa > 1:887849/1‑239 (MQ=255) cGCCCTG‑GAATAAGCGTTGTGAAGAAGCGGTAGAAAAGAGGACAAAGGCAAACTCACCACCCTGACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGAACGAGGTAAAGAAc > 2:734816/1‑239 (MQ=255) tgtgAAGAAGCGGTAGAAAAGAGGACAAAGGCAAACTCACCACCCTGACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGATGGGTGACATGCCGACCGAAATAAAGAACAAACCGAGCAACAAg > 1:807220/1‑237 (MQ=255) aaaaaggggaaaaaaaGAGGAAAAAGACAAACCCACCCCCCTGACTCAACCCGCCAGC‑AAA‑CTGCACCCCCTCTGAGCTACCCAAGCCATACACTCGCGCCAGCAGATACAGCACGAGAATTTTCCCCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTg < 1:149954/227‑1 (MQ=255) agaagCGGAAAAAAAGAGACAAAACGCAACCCCACCCCCCTTCACCAAACCCCCAGC‑AAA‑CTCCATCCGCTCGGACCCTCCGACCCCAGAAAATCGCCCCATCAGATACAGCACGAAAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACATAGATAAAGAACAAACCGAGCAGCAAGCCTTTg < 1:26104/238‑1 (MQ=255) aagCGGTAGAAAAGAGGACAAAGGCAAACTCACCACCCTGACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGAATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGCGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAg > 2:717181/1‑239 (MQ=255) gggggaaGAAAAGAGGACAAAGGCAAACTCACCACCCTGCCCCAACACGCCAGC‑AAA‑CTGCATCCGCACTGAGCTACGCACGCCATACAAGCGCGCAAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAg < 2:891294/232‑1 (MQ=255) gTAGAAAAGAGGACAAAGGCAAACTCACCACCCTGACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCCCCCCTATCACTACCCACAACAGATGGGTATAAAGCACCCCTGCGTTGAGTGACATGCCGACACGGATAAGAAACAACCCCAACAGCAAGACTTGAAAggggcg > 1:764562/1‑236 (MQ=255) gTAGAAAAGAGGACAAAGGCAAACTCACCACCCTGACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAGAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATc > 2:810445/1‑239 (MQ=255) aaaGGCAAACTCACCACCCTGACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTAACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGAACGCGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGACCGATACCCGTTTccg > 2:316042/1‑238 (MQ=255) caccCTGACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGCCATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGAAAAACGATTCCAGATCATGGCGaaaa > 1:304654/1‑236 (MQ=255) caccCTGACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGCCATGCCGACAGAGATAAAGAAAAAACCGAGCAGCAAGCCTTTGAAGAGATCGATAACCGTTTCCAGTTCATTGCGctat > 2:11671/1‑239 (MQ=255) tGACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGc < 2:228795/229‑1 (MQ=255) tGACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGc > 1:228795/1‑229 (MQ=255) gACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCCACCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGACCAGCAAGCCTTTGAAGGGATCAATAGCAGTTTCCAATTCACGGCGATAGTCAAtt > 1:564126/1‑239 (MQ=255) gACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAACGAACAAACCGAGCAGCAAGCCTTTGCAGGGATCGATAGCCGTTTc > 2:476303/1‑217 (MQ=255) acacGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGcc > 2:501297/1‑239 (MQ=255) cacGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACa > 2:180681/1‑157 (MQ=255) cacGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGCTCGAAAACCGTTTCCAGTTCATGGCGAAATTCCCTTTCCCCca > 1:588571/1‑239 (MQ=255) c‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATAAAATCGCGCCAGCAGATACAGCACGAGAATTTTCACTGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCAGTTTCACATTCATGGCGATCTTCCCTTTCCGCCAGCAGCAc > 2:439926/1‑238 (MQ=255) aa‑CTGCACCCGCCCAGAGCTCAGCCCGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTCCACCGCCAACAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGcc < 2:417663/239‑1 (MQ=255) tGCATCCGCTCTGAGCAACGCACGCCACACAAGCGCGCCCGCAGATACAGCCCGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGc < 2:764562/239‑1 (MQ=255) tGCACCCCCTCTGAGCTACGCCCGCCATACAATCGCGCCAGGAGAAACAGCCCGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGc < 2:588571/239‑1 (MQ=255) ccacgcccgcCTTACAATCGCGCCAGCATATACAGCCCGAAAATTTCCACCGCCACCAGCACAACCACGCTTAACACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAg < 2:807220/237‑1 (MQ=255) caccgcccgccAAAAAAACGCGCAAGCAGATAAACCACGAAAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGa < 2:328297/235‑1 (MQ=255) cgcgCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGGTTCCAGTTCATGGCGATCTTCACTTTCCGCCAGCAGCACGCCCGCCATAAATGCACCAGACGCCAACAACAGCCCCac > 1:42780/1‑238 (MQ=255) cgcCAGCAGATACAGCACGAAAATTTTCACCGCCACCAGCACAACCACGCTTATCCCTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAgcg < 2:581869/239‑1 (MQ=255) cgcCAGAAGATACAGCAGGAAAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAgcg < 2:887849/239‑1 (MQ=255) cccgacgataaaacgCAAGAAAATTTTCACCGCCACCAGCGCAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAgcg < 2:436761/225‑1 (MQ=255) cccccgcagTTACACCACGAAAATTTTCCCCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAgcg < 1:892888/234‑1 (MQ=255) ccAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCTCCAGCAGCACCCCCCCCAAAAAAGTACCAAGCGCAAACACCAGCCCCAacga > 1:314156/1‑237 (MQ=255) ccAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAgccc > 2:892888/1‑236 (MQ=255) ccAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAACACGCCCGCAATCAAGGAACCGAACGCCCTCGCCACccccccccc > 1:557975/1‑233 (MQ=255) atcactccGAGAATTTCCCCCGCCACCAGCCCAACCCCGCTTATCTCTACCCACAACAGATGGGTATAAAGCACCCCGTGGTTGAGTGACATGCCGAAAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATaaa < 2:564126/232‑1 (MQ=255) cACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCACGCCTTTGAAGGGATCTATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCCTCGCCAGCCCCAGCGCATCCATAAACAAt > 2:193221/1‑238 (MQ=255) cACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGAGCCATCGACAGCCCCCGCCAATCCATaaaacaa > 1:130536/1‑234 (MQ=255) cGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCg > 2:772197/1‑239 (MQ=255) cGAAAATTTTCCCCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCg < 2:557975/239‑1 (MQ=255) | AGCTTCATCAGCAACGGCGTGGTCATCATGGAAAGCGTCACCGTCACCAGCAACAACGCCATCTGGTCGCCCTG‑GAATAAGCGTTGTGAAGAAGCGGTAGAAAAGAGGACAAAGGCAAACTCACCACCCTGACTCAACACGCCAGC‑AAA‑CTGCATCCGCTCTGAGCTACGCACGCCATACAATCGCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCG > NC_000913/3479482‑3479922 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |