New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 458799	0 (0.000)	66 (1.260)	49/406	NT	100%	intergenic (+99/‑89)	clpX/lon	ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La
	?	NC_000913	= 609347	NA (NA)					intergenic (+170/+112)	insL1/entD	IS186 transposase/phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex

AGCCATCGCTGGATTTCCCCCCCAGAAGTGCCGGATCCGAAAAGAAGAACTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACCTGCTGTTTATTCCAGCTAATT  >  NC_000913/609125‑609567                                                                                                                                                                                                                                |                                                                                                                                                                                                                             aGCCGTCGCTTGATTTCCCCCACAGAAGTGCCGGAGCCGAAAAGAAGAACTCACTCGTTGTGGAGAATAACAAAAATGGTCATGTGGAGTTTACAGGTTGCCATTCGTGGGACAGTATCCCGTACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTAGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAg                                                                                                                                                                                                                         <  1:463044/228‑1 (MQ=11)   ccATCGCTGGATTTCCCCCCCAGAAGTGCCGGATCCGAAAAGAAGAACTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTACGTTAGC‑GCTTATGGGAGt                                                                                                                                                                                                                        >  2:500471/1‑227 (MQ=11)   ccATCGCTGGATTTCCCCCCCAGAAGTGCCGGATCCGAAAAGAAGAACTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTa                                                                                                                                                                                                                       >  2:262800/1‑228 (MQ=31)        gCTGGATTTCCCCCCCAAAAGTGCCGGATCCGAAAAGAAGAACTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATccc                                                                                                                                                                                                                  <  2:55532/228‑1 (MQ=18)                        aGAAGTGACGGATCCGAAAAGAAGAACTAAACAGTTGTTGAGAATTACAAAAATGGTCATCGTGAGCTTCAAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTgt                                                                                                                                                                                                   <  1:364108/227‑1 (MQ=14)                            gTGCCGGATCCGAAAAGGAGAACTAACTCGTTGTGGAGAATAACCAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTgtcaggt                                                                                                                                                                                              <  2:576846/228‑1 (MQ=255)                                 ggAACCGAAAAAAAGAACTAACTCGTGGTTGAGAATAAAAAAAAGTGGCATCGGGAACTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGa                                                                                                                                                                                         <  1:196327/228‑1 (MQ=14)                                  gATCCGAAAAGAAGAACTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGAGGGTTCAACCCTTAAGTTAGC‑GCTTATGGGCGTAATCCCCGCATATCCGGTTTccaggtcagg                                                                                                                                                                                          >  1:375235/1‑226 (MQ=255)                                    tCCGAAAAGAAGAACTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTCCAACCCTTAATTTACC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATg                                                                                                                                                                                       >  1:239836/1‑227 (MQ=255)                                       aaaaaGAAGAACTAACGCTGTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCAATCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGt                                                                                                                                                                                     <  2:586483/225‑1 (MQ=255)                                           agaagaACTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCa                                                                                                                                                                               <  2:511500/228‑1 (MQ=255)                                            gaagaaCTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCAc                                                                                                                                                                              <  2:151272/228‑1 (MQ=255)                                            gaagaaCTAACCCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATGCGTTGGACAGTACCCCTGCAAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTGCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCAc                                                                                                                                                                              <  2:271561/228‑1 (MQ=255)                                                          ttGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGGGTAATCCCCGCATATCCGGTTGTCATGACAGGATGGTAAGGACCCTGCTTTACACttt                                                                                                                                                                >  1:193008/1‑228 (MQ=255)                                                               ggaaaaaaCAAAAATGGTCATCTGGAACTTACAGGTGGCCAATGGTGGGACAGTTTCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGccc                                                                                                                                                           <  1:182283/222‑1 (MQ=255)                                                                  aaTAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTCGTCAGGTCAGGATGGTAAGGCACATGCTTTACACTTTCGCCCggg                                                                                                                                                        >  2:590912/1‑226 (MQ=255)                                                                   aaaaCCAAAATGGTACTCTGGACCTTACAGGTGGCCATTCGGGGGACAGGTACCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTgg                                                                                                                                                       <  1:500471/226‑1 (MQ=18)                                                                      aCAAAAATGGTCATCGGGAGCTTACAGGTGGCCATTCGGGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTc                                                                                                                                                     <  1:588153/227‑1 (MQ=255)                                                                            aTGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCCGGATGGTAAGGCACCGCCTTTACACTTTCTCCCGTGGCCAGGGATg                                                                                                                                              >  1:243953/1‑228 (MQ=255)                                                                               gTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGCGGCACCGAGGCGTCGCATTCTCCAGAGGGTTCAACCCTTAAGTTGGC‑GCTTATGGGACTAATCCCCGCCTATCCGGTTGCCACGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCTTGGGCAGGGATGGCt                                                                                                                                           >  1:220276/1‑228 (MQ=18)                                                                               gTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGGCAGGGCTGGcg                                                                                                                                           >  1:6002/1‑227 (MQ=255)                                                                                        gacTTAGAGGTGGCCATTCGTGGGACAGTATCCATGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAAGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTGAGC‑GCTTATGAGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGaa                                                                                                                                  <  2:69022/226‑1 (MQ=255)                                                                                         gCTTTCAGGTGGCCGTTCGTGGGACATTATCCCTGACAGCCTACAAAACGGAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAAt                                                                                                                                 <  1:262800/228‑1 (MQ=255)                                                                                          cTTACAGGGGGCCATGCTGGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAAt                                                                                                                                 <  2:557211/227‑1 (MQ=255)                                                                                           gtACAGGTGGCCCATCGTGGGACAGTATCCATGACCGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAAt                                                                                                                                 <  2:354163/225‑1 (MQ=255)                                                                                                 ggtgCCATTCGGGGGAACGTATCCCTGAACGACTACAAAACGCAAATGAAGAAAGCGAGGGATCTGCTTGACGAGGCATCGAGGCGGCGGATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGGGTAATCCCCGCATATCCGGTTGTCCGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAg                                                                                                                         <  1:607129/225‑1 (MQ=25)                                                                                                    gCCATTCGTGGGACAGTATCCCTGATAGCCTACAAAACGCAATTGAAGAACGCGATGCATCGTCTTAACGAGACTCCGAGTCGTCGCATTCTTCAAATGGTTCAACCCTTAAGTTAGC‑GCTTATTGGAGTATTCCCCTCATATCCGGTTGTCATGTCAGGATATTAAGGCACCAACTTTCCACTTTCGCCCTCGTCCAGTGTTCGCTTGGGGCGAACCGTccccctcg                                                                                                                      >  1:60806/1‑223 (MQ=17)                                                                                                     ccATTCGTGGGACAGTATCCCTTACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCg                                                                                                                                                          <  2:169906/191‑1 (MQ=255)                                                                                                       aTTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGGGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGAtgttg                                                                                                                   <  1:259926/228‑1 (MQ=255)                                                                                                                acagactccctgaatcagttcAAAACGCGAATGAAGACCGAGAGGCGTCGTCTTATCGAGTCACAGTGACGTGGCAACTTGCAGATGGTTCGACTCTTACGTTAGC‑AGTTGTGGGAGTAAGCCCCGCCTAGCCGGTTGTCAGGGGCGGAGGGTGAGACACCTGCATTCCGCTGTCGCCCGTGGTCAGTTATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAAt                                                                                                          <  1:135079/208‑1 (MQ=255)                                                                                                                    tATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCgtg                                                                                                      >  2:456713/1‑228 (MQ=255)                                                                                                                    tATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCCCCCGTGGCCAGTGATGGCTGCGGGCGAACCGTACCAGATGTTGTCAATTAATCgtg                                                                                                      >  1:581131/1‑228 (MQ=255)                                                                                                                          tGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGGCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGc                                                                                                 <  2:6002/227‑1 (MQ=255)                                                                                                                           gaaaGCCTACAAAACGCGATTGAAGAAGCCGAGGCCTCGTCTTAACGAGGCGCCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGca                                                                                                <  1:26698/224‑1 (MQ=255)                                                                                                                           gACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTaa                                                                                                           >  2:616704/1‑216 (MQ=255)                                                                                                                           gACAGCCTACAAAACGCAATGGAAGAACGGGAGGGATCGTCTTAAGGGGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGACCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGca                                                                                                <  1:98796/227‑1 (MQ=255)                                                                                                                            aCAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAAt                                                                                                          <  1:616704/216‑1 (MQ=255)                                                                                                                            aCAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAAGTGTTGTCAATGAATCCTGATGGcaca                                                                                              >  1:306307/1‑228 (MQ=255)                                                                                                                              aGCCTACAAAACGCAATTGTAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGACCCAGATGTTGTCAATTACTCGGGTTGGCACAGc                                                                                            >  1:161895/1‑228 (MQ=255)                                                                                                                                ccTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTTTCAATTAATCGTGTTGGCCCAGCGt                                                                                          >  1:36105/1‑228 (MQ=255)                                                                                                                                ccTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATAGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGCCAGTGATGGCTGCGGGCGAATCGAACCAGATTTTTGCAATAAAACGTGTTGGcacaaggt                                                                                          >  1:271626/1‑224 (MQ=25)                                                                                                                                  tACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGGGTTGGCACAGCGTTa                                                                                        >  2:204150/1‑228 (MQ=255)                                                                                                                                                   gaaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTTTTGGCACAGCGTTTTGACTAtcttttcttt                                                                        >  2:439166/1‑227 (MQ=255)                                                                                                                                                    aacggagggCATCGTTTTAACGAGGCAACGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAATGTAGC‑GCTTATGGGAGTAAGCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTa                                                                      <  2:243953/221‑1 (MQ=255)                                                                                                                                                           ggCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCGGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCCATTGTTGTCAATTAATCGTTTTGGCCCAGCGTTATGACACTTTTTTCTTTTATTTGccc                                                               >  1:424861/1‑227 (MQ=37)                                                                                                                                                                cGTCTTAACGAGGCCCCGAGGCGTCGCATTCTGCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGca                                                          <  2:193008/228‑1 (MQ=255)                                                                                                                                                                        cggggCCCCGAGGCGTCGCCTTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCaaa                                                   <  1:204150/224‑1 (MQ=255)                                                                                                                                                                            gCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGGGTTGGCACAGCGTTATGACTATCTTTCCTTTTATCTGCCAGGTCCCACAAAACAtct                                              >  2:236149/1‑228 (MQ=255)                                                                                                                                                                            gCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTCCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGCAAATTAATCGTGTTGGCCCAGCGTTATGACTATCTTTTCTTTTATCGTCCAGTGCACACAAAAAAtct                                              >  1:61554/1‑228 (MQ=39)                                                                                                                                                                                  gggggTCGCATTTTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATtct                                        <  1:456713/224‑1 (MQ=255)                                                                                                                                                                                       tCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCACTTCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACg                                    <  1:648806/227‑1 (MQ=255)                                                                                                                                                                                        cGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGaaagtgtaaagcag                                                                                                                      >  1:578593/1‑132 (MQ=255)                                                                                                                                                                                         gCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGaaagtgtaaagcagg                                                                                                                     <  2:578593/144‑14 (MQ=255)                                                                                                                                                                                                 cAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGCCTATCTTTTCTTTTATCTGCCATGGCACAGCAAACATCTCATTCTCACGATGCAtgatga                         >  2:502278/1‑228 (MQ=255)                                                                                                                                                                                                     tGGTTCAACCCTTAAGTGAGC‑GCTTATGGGAGTAATCCCCGTATATCCGGTTGTCAGGTCAGGATGGGAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACctg                     <  2:161895/228‑1 (MQ=255)                                                                                                                                                                                                     tGGGTCAACCCTTAAGTTAGCTGCTT‑TGGGAATTATCCCCGCATTTCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGGGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACctg                     <  1:470376/228‑1 (MQ=255)                                                                                                                                                                                                      ggTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACctg                     <  2:36105/227‑1 (MQ=255)                                                                                                                                                                                                         tCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGCCCTGCTGt                 >  2:620789/1‑228 (MQ=255)                                                                                                                                                                                                         tCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACCTGCTGt                 >  2:551453/1‑228 (MQ=255)                                                                                                                                                                                                                    gTTGGC‑GCTTTAGGGAGTAATCCCCGCATATGCGGTTGTCAGGTCAGGATGGTAAGGCCCCTGCTTTACAATTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACCTGCTGTTTATTCCAGCt      <  1:439166/228‑1 (MQ=255)                                                                                                                                                                                                                    gTTAGC‑GTTTAAGGGGTTAATCCCCGCATATCCGGTTGTCAGGTAAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACCTGCTGTTTATTCCAGCt      <  1:356603/228‑1 (MQ=255)                                                                                                                                                                                                                       aGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCCATTAATCGTGTTGGCACAGCGTTATGCCCACCTTTTCTTTTATCTGCCAGTGCACGCCCAACATCTCATTTGCCCGGTGAATGATGACTTGCGGtttcgttcccttat    >  1:457677/1‑216 (MQ=255)                                                                                                                                                                                                                       aGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGATTGATGACCTGCTGTTTATTCCAGCTaa    >  2:116533/1‑227 (MQ=255)                                                                                                                                                                                                                       aGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACCTGCTGTTTATTCCAGCTaa    >  2:505159/1‑227 (MQ=255)                                                                                                                                                                                                                       aGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTCTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTACTCGTGTTGGCACAGCGTTAGGACTATCTTTTCTTTTATCTGCCAGTGAACAGCAACCATCTCATTCTAACGCTGAATGATGACCTGCTGTTTATTCCACCTAAt   >  2:531252/1‑228 (MQ=255)                                                                                                                                                                                                                       aGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGGAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCCATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCCATCTCACGATGAATGTTGACCTGCTGTTTATTCCaacaaa    >  1:631959/1‑222 (MQ=255)                                                                                                                                                                                                                        gc‑gcTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACCGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGCTGAATGATGACCTCCGGTTTATTCCAGCTAAt   >  1:581457/1‑227 (MQ=255)                                                                                                                                                                                                                        gc‑gcTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGGGTTGGCCCAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTAATTCTCACGATGAATGATAACCTGCTGTTTATTCCCGCTAAtt  >  2:310761/1‑228 (MQ=255)                                                                                                                                                                                                                        gc‑gcTTATGGGAGTAATCCCCGCATATCCGGTTGGCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAatgatg                          <  2:457677/204‑1 (MQ=255)                                                                                                                                                                                                                                |                                                                                                                                                                                                                             AGCCATCGCTGGATTTCCCCCCCAGAAGTGCCGGATCCGAAAAGAAGAACTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGC‑GCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACCTGCTGTTTATTCCAGCTAATT  >  NC_000913/609125‑609567

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.