Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC NC_000913 3,815,858 Δ82 bp 100% [rph]–[rph] [rph], [rph]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3815858 3815939 82 77 [0] [0] 77 [rph]–[rph] [rph], [rph]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 38158570 (0.000)74 (1.460) 53/394 NT 100% pseudogene (24/48 nt) rph ribonuclease PH (defective),enzyme, Degradation of RNA, RNase PH
?NC_000913 3815940 = 0 (0.000)pseudogene (609/669 nt) rph ribonuclease PH (defective),enzyme, Degradation of RNA, RNase PH

TTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACG  >  NC_000913/3815713‑3816166
                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                   
agatcgcgcccggtattaaacagcccggcgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcc                                                                                                                                                                                                                                     <  1:366701‑M2/1‑1 (MQ=255)
      cgcccggtattaaacagcccggcgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgcccctaatcttacttttctacagccaaaaaaaaggcgactcatcagtcgccttaaaaatcagttttcccgcgccgccttctgcCGCcccc                                                                                                                                                                                                                               >  1:468640‑M2/222‑228 (MQ=255)
      cgcccggtattaaacagcccggcgttgaagaaataagggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTcccc                                                                                                                                                                                                                               >  2:178332‑M2/222‑228 (MQ=255)
         ccggtattaaacagcccggctttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTg                                                                                                                                                                                                                             <  2:614890‑M2/9‑1 (MQ=255)
            gtattaaacagcccggcgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaagcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttcctcCGTCCCCCGCAc                                                                                                                                                                                                                          >  1:615616‑M2/216‑227 (MQ=255)
                       cccggcgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaatttaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGc                                                                                                                                                                                                                            >  1:118333‑M2/205‑214 (MQ=255)
                       cccggcgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaatgccactcatcagtcgccttaaaaatcattttgacagcgccgccttcttcCGTCCCCTGCACttcaatgaatga                                                                                                                                                                                                              >  1:230302‑M2/205‑224 (MQ=255)
                       cccggcgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttccgcCGCCCCCTGCACTTCAATGATgc                                                                                                                                                                                                               >  1:168766‑M2/205‑227 (MQ=255)
                       cccggcgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccaccgccgccttctccCGTACCCTGCACTTcaataatggg                                                                                                                                                                                                              >  1:638711‑M2/205‑226 (MQ=255)
                       cccggcgttgaagaaataggggcttttgagcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgacttcactcatcatcttacttttctacagccaaaaaaaaggcgactcatcagtcgccttaaaaattagttcgccatcgcccacttctgcGGTCCCCTGCACTTCAATCATacg                                                                                                                                                                                                              >  2:53695‑M2/205‑228 (MQ=255)
                        ccggcgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaatttaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCa                                                                                                                                                                                                                           <  2:118333‑M2/11‑1 (MQ=255)
                        ccggcgttaaaaaaaaaggggcgtttgcgcacggatctccgcggaaactcgccaagctttaacacctgcttgctaagcgcaaattcaagaaactggcgctgataggttttcatgccttcgctcctcatcgtacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATgcgc                                                                                                                                                                                                             <  1:611350‑M2/25‑1 (MQ=255)
                         cggcgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATgcgc                                                                                                                                                                                                             <  2:468640‑M2/25‑1 (MQ=255)
                         cggcgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgcacccttctgcCGCCCCCTGCACGTCAATGATGCGcc                                                                                                                                                                                                            >  2:651876‑M2/203‑228 (MQ=255)
                                gaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTcc                                                                                                                                                                                                                                 >  2:633126‑M2/196‑200 (MQ=255)
                                 aagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTccc                                                                                                                                                                                                                                <  1:633126‑M2/6‑1 (MQ=255)
                                   gaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCg                                                                                                                                                                                                    <  2:63506‑M2/34‑1 (MQ=255)
                                     aataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGtca                                                                                                                                                                                                <  2:586070‑M2/38‑1 (MQ=255)
                                      ataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttcccatcgccgccttctccCGTCCCCTGCACTTCAATGATGCGCCCCTCTTCGGtcat                                                                                                                                                                                               >  2:590319‑M2/190‑228 (MQ=255)
                                           ggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttacaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATCCACCCGTCTTCGATCATCACTa                                                                                                                                                                                          >  2:170348‑M2/185‑228 (MQ=255)
                                           ggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGGCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTa                                                                                                                                                                                          >  2:324248‑M2/185‑228 (MQ=255)
                                             cttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgccaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccatcgcccccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGCCTTCGGCCATCACTA‑c                                                                                                                                                                                        >  1:78816‑M2/183‑227 (MQ=255)
                                               tttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaacttcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagccaaaaaaaaggcgacttatcagtcgccttacaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTC‑CGt                                                                                                                                                                                      >  2:460706‑M2/181‑227 (MQ=255)
                                               tttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaattaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccaccgccgccttctgcCGTCCCCTGCACTTCACTGATGCGCCCGCCTTCGGCCATCTCTC‑CGt                                                                                                                                                                                      >  2:52415‑M2/181‑227 (MQ=255)
                                                    gcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccatctgcCCTACCCTGCACTTCAATTATGCGCCCGTCTTCGGTCACACCTA‑CGTTCAtgc                                                                                                                                                                                >  1:579963‑M2/176‑227 (MQ=255)
                                                         gatttcagtgtaaacctgccaacattaaaccccgtcttgctaagcgcaaaatcaatgacctggcgctgataggggttcatgccttcgctcctcatcttacttttctacagacaaaaaaagggcgacgcagcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGt                                                                                                                                                                            <  1:33808‑M2/57‑1 (MQ=255)
                                                          atttcagcgtaaactcgccaaactttaacccctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGtct                                                                                                                                                                          <  2:169850‑M2/59‑1 (MQ=255)
                                                          atttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGtct                                                                                                                                                                          <  2:544780‑M2/59‑1 (MQ=255)
                                                          atttcagcgtaaactcgccaaacttgaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGtct                                                                                                                                                                          <  2:617502‑M2/59‑1 (MQ=255)
                                                                  gtaaactcgccaaactttaacccctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCa                                                                                                                                                                  <  2:242901‑M2/67‑1 (MQ=255)
                                                                  gtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCCTCACTC‑CGTTCATTTCGGTTCCTGCGGc                                                                                                                                                                   >  2:549475‑M2/162‑227 (MQ=255)
                                                                    taactccccaaactttaacccctgcttgctaagcgcaaattaaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttgtctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCaga                                                                                                                                                                <  1:651876‑M2/69‑1 (MQ=255)
                                                                    aaactctccaacatttaacccctgtttgctaagcgcaaattcaataaactggccctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgacccatcagtcgccttaaaaatcagttggccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCaga                                                                                                                                                                <  1:558627‑M2/69‑1 (MQ=255)
                                                                     aacccgccaaactttagcgccttgctgcgaagggcaaattcaaaagactggcgctgttgttgtttcctgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCaga                                                                                                                                                                <  1:52415‑M2/69‑1 (MQ=255)
                                                                         ctccaacacttaacccctgcttgctaagcggaaattcaaaaaactggcgatgatatggtttcatgccttcgcccctcatcttacttttctacaggcaaaaaaaaggcgactcatcagtcgacttaaaaatcagttggccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCtt                                                                                                                                                           <  1:368368‑M2/74‑1 (MQ=255)
                                                                           ccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGGCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGCAAGAGTCTTCa                                                                                                                                                         >  2:412619‑M2/153‑228 (MQ=255)
                                                                                           gcttgctaagcgcacattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTC‑CGTTCATGTCGGTCTCTGCGTCAGAGTCTTCAACGGattccaagtcc                                                                                                                                          >  2:244086‑M2/137‑222 (MQ=255)
                                                                                           gcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGAtcc                                                                                                                                          >  2:24441‑M2/137‑226 (MQ=255)
                                                                                           gcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGCCGGTCCCTGCGGCAGAGTCTTCACCCGattccaaaccc                                                                                                                                          >  1:262301‑M2/137‑222 (MQ=255)
                                                                                                   agcgcaaattcaataaactggcgctgatatggattcatgccttcgctcctcatcttacttttctacagacaaaacaaaggagactcatcagtcgccttcaaaatcagtttgccagcgccgccttctgcCGTCCCCTTCACTTCAATGATGCGCCCGTCTCCGTTCATCACTA‑CGATCCTGTCATTCTCTGCGGCCGAGTCTTTCACGTATTCCAAAACGCAAACCGCt                                                                                                                                 >  1:189950‑M2/129‑228 (MQ=255)
                                                                                                     cgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTc                                                                                                                               >  2:551571‑M2/127‑228 (MQ=255)
                                                                                                             taataaactggcgtttatatggtttcatgccttcgctcctcatcttcattttgatcagacaaaaaaaaggcgacccatcagtcgccttaaaaatcagtttgccagggccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGCCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTca                                                                                                                       <  1:590319‑M2/110‑1 (MQ=255)
                                                                                                                     tggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCCGAATTCCg                                                                                                               >  2:431449‑M2/111‑228 (MQ=255)
                                                                                                                      ggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACCGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCg                                                                                                               >  2:393113‑M2/110‑228 (MQ=255)
                                                                                                                       ggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTccc                                                                                                                                                                                                                                >  1:623559‑M2/109‑114 (MQ=255)
                                                                                                                        gcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTcccc                                                                                                                                                                                                                               <  2:623559‑M2/7‑1 (MQ=255)
                                                                                                                                      catgccttcgctcctcatcttacttttctacagacaaaaaaaaggccactcatcagtcgctgtaaaaatcagtttgccagcgcctccttctgcCGTCCCCTTCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCTGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTc                                                                                                                        <  2:351002‑M2/109‑1 (MQ=255)
                                                                                                                                      cacttcttcgacccacatcttgcatttccgcaagcaaaaaaaaggcgcctcactggactccttaaaaatcagtttgccagcgccgcattctgcCGTCCCCTGCCCGTCAATGATGCGCCCGTCTGCGGTCATCACTA‑GGTTCATGTCGTTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTa                                                                                               <  1:53695‑M2/134‑1 (MQ=255)
                                                                                                                                       atgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTCCTCCGTTCACAATTACGCCAGAAactgcgcgtga                                                                                              >  2:502982‑M2/93‑222 (MQ=255)
                                                                                                                                       atgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑AGTTCCTGTCGGTCTCTGCGGCAGAGTATTCACCGGATTCCAGATCCCAAAACGCTTCCCCGTTCACCATTCCGACAGAAACTGCGGCTAcc                                                                                             >  1:425922‑M2/93‑228 (MQ=255)
                                                                                                                                        tgccttcgctcctcatcttacttttctacagacaaaaaaaagtcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCa                                                                                            >  2:555396‑M2/92‑228 (MQ=255)
                                                                                                                                        tgccttcgctcctcatcctacgtttccaccgacaaaaaaaaggcgactcatcagtcgtcttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCa                                                                                            <  2:246398‑M2/137‑1 (MQ=255)
                                                                                                                                         tccctccctcctcatttttcttttacacagacaaaaaaaaggctgctcatcaggcgccttaaaactcagtttgccagcgccgacttctgcCTTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACGA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCa                                                                                            <  1:502982‑M2/137‑1 (MQ=255)
                                                                                                                                            ttcgctcctcatcttactttttctcagacaaaaaaaaggcgactcatcagtcgccttaaaaagcagtttgcccgcgccgccttctgcCGGCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATccc                                                                                        <  1:324248‑M2/141‑1 (MQ=255)
                                                                                                                                            ttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGCATTCCAGATCGCAAACCGCTTCGCCGTTACCAATTCCGACAAAAAATGCGGCCACCAcccc                                                                                        >  1:395929‑M2/88‑228 (MQ=255)
                                                                                                                                                       tgtgtacttttcacagacaaaaaaaaggctactcatcaggcgacttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGGACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCTGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGAt                                                                             <  2:160966‑M2/152‑1 (MQ=255)
                                                                                                                                                       tcttattttttcacagacaaaaaaaaggcgacccaacagtcgtcttaaaaatcagtttgcccgcgccgccttctgcCGTCCCCTGGACTTCAATGATGCGCCCGTCTTCGGTCATCACTT‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGAt                                                                             <  1:587801‑M2/152‑1 (MQ=255)
                                                                                                                                                                tctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCCCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACACTCCCTTTAATCGGATTGGTTTTc                                                                     >  2:230171‑M2/68‑227 (MQ=255)
                                                                                                                                                                 ctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCt                                                                                       >  1:426496‑M2/67‑208 (MQ=255)
                                                                                                                                                                  taaagacaaaaaaaaggcgacccatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCtt                                                                                      <  2:426496‑M2/143‑1 (MQ=255)
                                                                                                                                                                   acagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGCCAGAAACTGAGGCTACCATCCCTTTCATCGGATTGGTTTTCACCt                                                                 >  2:11352‑M2/65‑228 (MQ=255)
                                                                                                                                                                    cagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGCCTTCAACGTATTCCAGATCGCAAACCGCTTCCCCGTTCCCAATTCCCACCGAAACCGCGGCCACCATACCCTTCACCGGATTGGgtttcgcct                                                                 >  1:238486‑M2/64‑223 (MQ=255)
                                                                                                                                                                       acaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTC‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCCCAATTCCGACAGAACCTGCGGCTACCATCCCTTTCACCGGCTTGGTTTTCACCTTGc                                                              >  2:241304‑M2/61‑227 (MQ=255)
                                                                                                                                                                       acaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGcc                                                             >  1:520960‑M2/61‑228 (MQ=255)
                                                                                                                                                                       acaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGc                                                              >  2:5574‑M2/61‑227 (MQ=255)
                                                                                                                                                                       acaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATCTCCGTCTCTGCGGCAGAGTCTTCACCGTATTCCAGATCGCAAACCGCTTCCCCGTTCCCCATTCCTCCCGAAACTGCGCCTCCCATCCCTTTCATCGGCTTGgttttcaaattcc                                                              >  1:57151‑M2/61‑221 (MQ=255)
                                                                                                                                                                                     actcatccgtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCACAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCCCCGTTACCAGTTCCGCCCGACACTGCGGCCACCATCCCTTTCACCGGATAGGGTTTAGACTTGCcgttttccccaccc                                                >  1:112475‑M2/47‑221 (MQ=255)
                                                                                                                                                                                          tcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGt                                          <  2:520960‑M2/187‑1 (MQ=255)
                                                                                                                                                                                           tcgtctccttaaaaattagtttgccagcgccgccttctgcCGTCCCCTGCACGTCAATGATGCGCCCTTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTa                                         <  2:189950‑M2/188‑1 (MQ=255)
                                                                                                                                                                                                 ccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCa                                    >  2:389298‑M2/35‑227 (MQ=255)
                                                                                                                                                                                                 ccttaaaaagcaggttgcccgcgccccctttggcCGTCCCCTGCACTTCAATGATGCGCCCGGCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTTAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCa                                    <  2:78816‑M2/193‑1 (MQ=255)
                                                                                                                                                                                                   ttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCTCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGAATGGTTTTCAGCTTGCCGTTTTCCACCCGCTTCtgaagcgccaca                                 >  1:231483‑M2/33‑224 (MQ=255)
                                                                                                                                                                                                        aatcagtttgccagcgcccgcttcggcCGTCCCCTGCCCTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAg                            <  2:504770‑M2/201‑1 (MQ=255)
                                                                                                                                                                                                          tcattttgccagcgcccccttcgtcCGTCCCCTGCTCTTCAATGAGTCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAgcg                          <  1:555396‑M2/203‑1 (MQ=255)
                                                                                                                                                                                                            agtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGCCAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTCCCAgcgc                         >  2:535872‑M2/24‑227 (MQ=255)
                                                                                                                                                                                                                tgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTCCGGCTACCATCCCTTTCATCGGATTGGGTTTAACCTTGCCGTTTTCCACCATCTTCTGTAGCCCATctaccacagcc                        >  2:327511‑M2/20‑219 (MQ=255)
                                                                                                                                                                                                                                  cCGTCCCCTGCCCTTCAATGTTGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCCCAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACg  <  2:262553‑M2/227‑1 (MQ=255)
                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                   
TTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA‑CGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACG  >  NC_000913/3815713‑3816166

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.