Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1216293	1216704	412	13 [11]	[11] 12	[ymgA]–ariR	[ymgA], ariR

TAAGTATAAGTTTATAGAAAACTCATTCATCTTATTTTTGTCTGTCGCTTTAGACTATACACAGCATAATTTTATTGGGTTAATATTTCTACGAGGCTGACATGAATAATTCAATCCCAGAGAGATTTATTTTTCAATGTGCTTTGTTTAAAAA‑TCTCGAGAGGGAGGTGTTCATGACGCATGGGTATGTTGATAGTCATATTATTGATCAGGCTTTACGCTTGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACAT  >  NC_000913/1216647‑1216932                                                           |                                                                                                                                                                                                                                     taAGTATAAGTTTATAGAAAACTCATTCATCTTATTTTTGTCTGTCGCTTTAGACTATACACAGCATAATTTTATTGGGTTAATATTTCTACGAGGCTGACATGAATAATTCAATCCCAGAGAGATTTATTTTTCAATGTGCTTTGTTTAAAAA‑TCTCGAGAGGGAGGTGTTCATGACGCATGGGTATGTTGATAGTCATATTATTGATCAGGCTTTACGCTTTCGtt                                                            >  2:235179/1‑228 (MQ=255)    gTATTATTTTATAGAAAACTTCTTCTTTTTTTTTTTGTCTTTCGCTGTAAACTATACCCAGCATAATTTTATTGGGTTAATTTTTCTACGAGGCTGACATGCATAATTCAATCCCAGAGAGATTTATTTTTCAATGTGCTTTGTTTAAAAA‑TCTCGAGAGGGAGGTGTTCATGACGCATGGGTATGTTGATAGTCATATTATTGATCAGGGTTTACGCTTGCGTTTaa                                                         <  1:343075/228‑1 (MQ=255)                         attcatCTTATTTTTGTCTGTCGCTTTAGACTATACACAGCATAATTTTATTGGGTTAATATTTCTACGAGGCTGACATGAATAATTCAATCCCAGAGAGATTTATTTTTCAATGTGCTTTGTTTAAAAA‑TCTCGAGAGGGAGGTGTTCATGACGCATGGGTATGTTGCTAGTCATATTATTGATCAGGCTTTACGCTTGGGTTTAAAAGATTAAACCAGGGTGAttc                                    >  1:606267/1‑228 (MQ=255)                                      ttttttttcGCTTGAGACTATACACAGCATAATTTTATTGGGTTAATAGTTCTACGAGGCTGACATGAATAATTCAATCCCAGAGAGATTTATTTGTCAATGTGCTTTGGTTAAAAA‑TCTCGAGAGGGAGGTGTTCATGACGCATGGGTATGTTGATAGTCATATTATTGATCAGGCTTTACGCTTGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTa                       <  1:235179/221‑1 (MQ=255)                                         tctgtcGCTTTAGACTATACACAGCATAATTTTATTGGGTTAATATTTCTACGAGGCTGACATGAATAATTCAATCCCAGAGAGATTTATTTTTCAATGTGCTTTGTTTAAAAA‑TCTCGAGAGGGAGGTGTTCATGACGCATGGGTATGTTGATAGTCATATTATTGATCAGGCTTTACGCTTGCGTTTAAAGGATGAAACCAGTGTGATTCTTTCTGTACTCTATCt                    >  1:388202/1‑228 (MQ=255)                                             tcGCTTTAGACTATACACAGCATAATTTTATTGGGTTAATATTTCTACGAGGCTGACATGAATAATTCAATCCCAGAGAGATTTATTTTTCAATGTGCTTTGTTTAAAAA‑TCTCGAGAGGGAGGTGTTCATGACGCATGGGTATGTTGATAGTCAtatt                                                                                     >  2:313307/1‑159 (MQ=255)                                              cGCTTTAGACTATACACAGCATAATTTTATTGGGTTAATATTTCTACGAGGCTGACATGAATAATTCAATCCCAGAGAGATTTATTTTTCAATGTGCTTTGTTTAAAAA‑TCTCGAGAGGGAGGTGTTCATGACGCATGGGTATGTTGATAGTCAtatta                                                                                    <  1:313307/159‑1 (MQ=255)                                                   tAGACTATTCACGACATAATTTTATTGGGTTAATTGTTCTACGAGGCTGACATGAATAATTCAATCCCAGAGAGATTTATTTTTCAATGTGCTTTGTTTAAAAA‑TCTCGAGAGGGAGGTGTTCATGACGCATGGGTATGTTGATAGTCATATTATTGATCAGGCTTTACGCTTGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTg          <  2:606267/228‑1 (MQ=255)                                                          taCACAGCATAATTTTATTGGGTTAATATTTCTACGAGGCTGACATGAATAATTCAATCCCAGAGAGATTTATTTTTCAATGTGCTTTGTTTAAAAA‑TCTCGAGAGGGAGGTGTTCATGACGCATGGGTATGTTGATAGTCATATTATTGATCAGGCTTTACGCTTGCGTTTAAAAGATGAAACAAGGGTGATTTTTTCTGATCTCTTTCTGCAAATATTGAAGTaaa   >  1:85825/1‑226 (MQ=255)                                                          taCACAGCATAATTTTATTGGGTTAATATTTCTACGAGGCTGACATGAATAATTCAATCCCAGAGAGATTTATTTTTCAATGTGCTTTGTTTAAAAA‑TCTCGAGAGGGAGGGGTTCATGACGCATGGGTATGTTGATAGTCATATTATTGATCAGGCTTTACGCTTGCGTTTAAAAGATGAAACCAGTGTGa                                       >  2:51847/1‑192 (MQ=255)                                                          taCACAGCATAATTTTATTGGGTTAATATTTCTACGAGGCTGACATGAATAATTCAATCCCAGAGAGATTTATTTTTCAATGTGC‑TTGTTTAAAAATTCTGGAGGGGGAGGGGTCCTTGAC‑CATGGGTATTTTGATAAGCATATTATTGATCAAGGTTTACGGTTGCGGTTAAAAAGTGGAAACCGTGGGGTTCTTTCTGATTTCTTTCTGCCAATATTTCAGTACAt  >  2:343408/1‑228 (MQ=255)                                                           acacAGCATAATTTTATTGGGTTAATATTTCTACGAGGCTGACATGAATAATTCAATCCCAGAGAGATTTATTTTTCAATGTGCTTTGTTTAAAAA‑TCTCGAGAGGGAGGTGTTCATGACGCATGGGTATGTTGATAGTCATATTATTGATCAGGCTTTACGCTTGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGAAGTAAAt  >  1:281958/1‑228 (MQ=255)                                                           |                                                                                                                                                                                                                                     TAAGTATAAGTTTATAGAAAACTCATTCATCTTATTTTTGTCTGTCGCTTTAGACTATACACAGCATAATTTTATTGGGTTAATATTTCTACGAGGCTGACATGAATAATTCAATCCCAGAGAGATTTATTTTTCAATGTGCTTTGTTTAAAAA‑TCTCGAGAGGGAGGTGTTCATGACGCATGGGTATGTTGATAGTCATATTATTGATCAGGCTTTACGCTTGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACAT  >  NC_000913/1216647‑1216932

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑