| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,466,856 | A→G | 11.7% | pseudogene (1465/2513 nt) | ydbA → | pseudogene, autotransporter homolog, interrupted by IS2 and IS30 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,466,856 | 0 | A | G | 11.7% | 121.8 / 8.1 | 53 | pseudogene (1465/2513 nt) | ydbA | pseudogene, autotransporter homolog, interrupted by IS2 and IS30 |
| Reads supporting (aligned to +/- strand): ref base A (23/23); new base G (2/4); total (25/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
TTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGT > NC_000913/1466635‑1467083 | ttaaggggtaggaCGCCACGGCAAACAACAACGGAAAAGCCACCTTTGACGGCAAGGATTCCAACGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACg < 1:526509/217‑1 (MQ=14) aCGCCACGGCAAACAACAACGGCAAAACCACCGGTGACGGCAAGGATTCCACCGGTATGGAAATTGCTGGTAATGACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCCCCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCa < 2:659883/228‑1 (MQ=255) caacGGCAAAACCAGCGTTGGCGGCAAGTATTCCACCGGTACGGAAATTGATGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAgg < 2:580078/228‑1 (MQ=255) agaaaagtatcagagACAGCAAGGAGTCCACCGGAACGGAAATTACGGGCAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCgaga < 2:59320/214‑1 (MQ=14) acaccccggTTCACGGAAAGTATTCCATCTGTACAGAACATGCTGGCAATAACGGGAAGGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCAACGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCa < 2:255561/220‑1 (MQ=17) ccccctttGACGGTAAGATTTCCAACGGTACCGAAATAAACGGAAATAACGGGAAAGTGATTCAGGACGGCGACCTGGATGTCAGCGGCGGCGGTAACGGTATTGATAACACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTa < 1:513205/222‑1 (MQ=11) ggATTCCCCCGGGCCGGAAATTGGCGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGcggcac < 2:548064/228‑1 (MQ=255) cctgTACGGAAATGGGGGGCAAATACGGGAAGGTTGCTCGGGACGGCGGTCTGGATGTCAGCGGCAGAGGTCACGGTATTGATATCCCCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACt < 2:8464/224‑1 (MQ=17) ggTACGGAAATTGCTGGCAATAACGGGAGGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAg < 2:263398/228‑1 (MQ=255) gTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATAACCAATGGcggcaccggccccccg > 2:448876/1‑221 (MQ=255) tACGGAAATTGGTGGCAATAACGGGAAGGTGATTCAGGACGGGTATCTGGAGGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACt < 1:448876/223‑1 (MQ=255) tACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGGATCCAGATTGACGGCGACCAGGCCATGTCCAATAACGAAGGCGAGAGACCTATAACCAATGGcggcaccgggccacaaaa > 1:632025/1‑219 (MQ=17) attaCGGGAAGGTGATTCAGGTCGGCGTGTTGGAGGTACGTGGCGGCGTTACCGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCa < 2:281808/225‑1 (MQ=17) aTAACGGAAAAGTTTGTCAGGAAGGGGATCTGGATGGCAGCGGCGGCGGGCACGGTATTGATCTCACCGGCGACTGCGCAGCGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCa < 1:652820/228‑1 (MQ=14) ggAAGGTGATTCAGGTCGGCGAGCTGTAGGTACGCGGAGGAGATCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACcgcg < 2:392683/227‑1 (MQ=17) ggATTCAGGGCGGGGTTTTGGGTGTCATGGGGCGCGGTCACGGTTTTGAAACCACCGGCCACAGCGCAACGGGGGATAACAAGGGCTCCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCAGCCAGGCCATCGTCAATAAGGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACa < 1:594216/227‑1 (MQ=17) cAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCACCGTCCATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCCCTCAGAACAACGGTAAAGACCCGACCCCGAATACCAGTGGa > 2:586194/1‑228 (MQ=17) cGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCCTCGGTATCCAGGTTGACGGCGACCAGGCCATCGTCAATAACGAAGGAGAGAGCAATCTCACCAATGGCCGCACCCGCACTCCGATCAACGGGAACGACGCCCCCGCGAATAAAAGAGGAAAAAc > 1:336107/1‑228 (MQ=17) gggATCTGGAGTTCAGCGGGGGGGGTCACGGTTTTGATATCACCGGCGACCGGGAAACGGTGGAAAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAAcc < 1:11891/225‑1 (MQ=18) gCGATCTGGATGTCAGGGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAAc < 2:422055/226‑1 (MQ=255) gATGGCAGCGGCGGCGGTCACGGTATTGATATCCCCGGCGACAGCGCAACGGTGGATAACAAGGGCCCCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAACCACTGTTGAt < 1:242124/228‑1 (MQ=255) aGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGAAACGACGCCACCCCGAGTAAAAGTGGAAAAACCCCTGTTGATGGaaaa > 2:569154/1‑228 (MQ=14) gcggcggTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGAGGCACCGGCAGCCCGATCAACCGTAACGACGCCACCGCCACGAACAGAGGaaaaaaacactatgatggcaaaaaac > 1:565389/1‑207 (MQ=17) cggcggTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAAACACTGTTGGTGTAAAAGATTc > 2:360486/1‑228 (MQ=255) atatCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGGACCAAAATcg > 2:404897/1‑228 (MQ=255) aCCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGAcc > 2:171459/1‑85 (MQ=33) aCCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGCCCATCGTCAATAACGTAGGCGAGAGCACTATCACCAATGGCGGCACCGGCCCTCAGATCAACGGTAACGCCCCCACACCGATTAACAGGGCACAAACACCTGTTTTAGGAACAGATTACACGGGTACCAAAATCACggga > 1:180149/1‑227 (MQ=18) ccGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCa < 1:171459/85‑1 (MQ=33) cGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGCGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCAACGGCACTCAGACCGACGGCAACGACGCCACCCCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAAATTCCCCGGG‑ACCAAAAACGCGGGCaaa > 1:500480/1‑227 (MQ=21) cGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGTGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAACCACTGTTGCTGGAAAAGATTCCACAGGTACCAAAATCGCGGGCaa > 2:446017/1‑228 (MQ=255) cGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAAACAAGGAAAAACACATGTTGATGGAAAAGATTCCACGGGGACCAAAAtaacggaaaa > 1:337568/1‑219 (MQ=21) cAGCGCAACGGATGATAACAAGGGCACCATGACCGTCGCCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGAACAGGCCATCGTAAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCgg < 2:604214/228‑1 (MQ=255) cgcAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGCATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCAt > 2:386143/1‑228 (MQ=255) cgcAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCCCGGGTACCAAAATCGCGGGCAATATCGGCAt > 2:70285/1‑228 (MQ=255) cgcAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGAGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAAACCCGGGAAAAATCGGCAt > 1:598775/1‑228 (MQ=255) cgcAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCAAATAACAGTGGAAAAACCACTGTTGATGGAAAAAAAACCACGGTGACCaaaaacaggggaaaaaacggaat > 1:41528/1‑209 (MQ=18) ggTGGATAACAAGGGCACCATGACCGGCACCGATCCGGAGTCCATCGGTAGCCAGGTTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCAATATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTaa < 2:336107/227‑1 (MQ=255) tGGATAACAAGGGAACCCGGACCGGCCCCGATCCGGAGTCCAGCGGTATCCAGATTGACGGCGACCAGGCCAGCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGACACCGCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAAt < 1:586194/227‑1 (MQ=255) ggtaaaCAAGGGCCCCCTGGCCGGCCCCGAATCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCt < 1:569154/224‑1 (MQ=18) tAACAAGGGCACCATGGCCCTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGGCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCt < 2:500480/225‑1 (MQ=255) aaCAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAACCACCGTTGATGGAAAAGATTCCACGGGGACCAAAATCGCGGGCAATAACGGCATTGAAAAACTGGaa > 1:18161/1‑227 (MQ=255) cAAGGGCCCCCAGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCAAGATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATgg < 2:484789/228‑1 (MQ=255) gggCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCCCGGGCCATATCGGCATTTGAAATCTGGAGGGTAg > 2:588025/1‑228 (MQ=255) gggCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACAAAAATCGCGGGCAAAATCGGCATTTCAACTTTGGATGGTa > 2:405464/1‑227 (MQ=255) gcccccctcccctCACCTATCCGGAGTCCATCGGTATGCAGTATGACGGGGACCAGGCCATCGGCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGc < 1:404897/215‑1 (MQ=255) gccccATGACCGTCACCGATCCGGAGTCCATCGGTCACCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCCCCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGc < 2:455061/224‑1 (MQ=255) ccATGGCCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCGCTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTg < 2:180418/227‑1 (MQ=255) tCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCAATATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGGGAATAACAGGGGGAAAACCAATGTTAATGGAAAAGGTCCACCGGGAACCAAAATTGCGGGCAAAATCGGCATTGTAAAGATGATAGGAACCCTGACTGTTACAg > 1:610127/1‑228 (MQ=21) aCCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCTGCATTGGAAATCTGGATGGTAGCCTGACTGTTAAAGGc > 1:77458/1‑228 (MQ=255) ccGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGGCAATAACGAAGGCGAGAGCACTATCACCAAAGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCGCCGCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCggg < 2:204449/181‑1 (MQ=255) gAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAACCACTGTTGAAGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAACATGGATGGTAGCCTGACTGTTACAGGCGGGGGGCa > 2:404319/1‑227 (MQ=255) cATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGCCAATATCGGCATTGTAAATCTGGAGGTGAGCCTGACTGTTCCAGGCGGGGCGCCTGgggt > 2:344330/1‑228 (MQ=37) cATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAAAAGTGGAAAAACCACTGTTGATGGCAAAGATTCCACGGGTACCAAAATCGCCGGCAATATCGGCATTGTAAAACTGGGTGGTAACCCGAAGGTTCCAGggggacgtcttggggt > 1:484085/1‑216 (MQ=25) aTTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGGGTTTAGAACATTggg > 2:76904/1‑227 (MQ=255) | TTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGT > NC_000913/1466635‑1467083 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |