| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,765,336 | G→C | 26.1% | R99R (CGC→CGG) | menI ← | 1,4‑dihydroxy‑2‑naphthoyl‑CoA hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,765,336 | 0 | G | C | 26.1% | 79.7 / 2.1 | 45 | R99R (CGC→CGG) | menI | 1,4‑dihydroxy‑2‑naphthoyl‑CoA hydrolase |
| Reads supporting (aligned to +/- strand): ref base G (12/20); new base C (11/2); total (23/22) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.36e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGTAGACATAGCATCCTCGCTTTTAGACAAGACCTGCACAGTATACCACCGTTTACTGTGCAGATAATGACCAAAAGCAATATGCGTCACACTTTTCTGGTGACAACGTCACAAAATGGCGGTCGTCAATCGTGACGAACAGCACAAACGCCCTTTCTCATCGAAGATTTCAATCTGCCAGACCTGGTGACGCGAACCGAG‑ATGCAACGGTTTGCATACGCCGCGCACCCGCCC‑TTCTCGTGCCGAGCGGACGTGGTTAGCA‑TTGATTTCCAGACCAACCACTTTTTGCTCACCTTCGGTACATAAATAACCGGCAACGGAACCGATACTTTCGGCCAGTACCACGGATGCTCCTCCATGCAGCAACCCGAAAGGCTGCTTTGTCCGCGAGTCTACTGGCATTGTCGCTTCAAGGGTGTCATCACCAATATGTTCAAAGCGA > NC_000913/1765114‑1765555 | aGTAGACATAGCATCCTCGCTTTTAGACAAGACCTGCACAGTATACCACCGTTTACTGTGCAGATAATGACCAAAAGCAATATGCGTCACACTTTTCTGGTGACAACGTCACAAAATGGCGGTCCTCAATCGTTGCGAACAACACAAACGCCCTTTCCCATCGGAGACTTCAATCTTCCCAACCTGGGGACGCGAAACCAG‑AATGAACCGTTTTCAAACACCCCGCAc > 1:637178/1‑228 (MQ=255) ccTCGCTTTTAGACAATGCCTGCACAGTATACCACCGTTTACTGTGCAGAAAATGACCAAAAGCAATAAGCGTCACACTTTTCTGGTGACCACGTCACAAAATGGCGGTCGTCAATCGTGACGAACAGCACAAACGCCCTTTCTCATCGAAGATTTCAATCTGCCAGACCTGGTGACGCGAACCGAG‑ATGCAACGGTTTGCATACGCCGCGCACCCGCCC‑TTCTCGTg < 2:314798/228‑1 (MQ=255) gACCTGCACAGTATACCACCGTTTACTGTGCAGATAATGACCAAAAGCAATATGCGTCACACTTTTCTGGTGACAACGTCACAAAATGGCGGTCGACAATCGTGACGAACAGGACAAACCGCCCTTCTCCTCGAAGATTTTCATCTGCCAGAACTGGTGACCCGAAACGCA‑ATTCAAAGGTTTGCCAACGCCGCGCCCCCCCCCGTTCTCGTGcaggcgccactggt > 1:63524/1‑214 (MQ=255) tataCCACCGTTTACTGTGCAGATAATGACCAAAAGCAATATGCGTCACACTTTTCTGGTGACAACGTCACAAAATGGCGGTCGTCAATCGTGACGAACAGCACAAACGCCCTTTCTCATCGAAGATTTCAATCTGCCCGACCCGGTGACGCGAACCGAG‑ATGCCACGAGTTGCCTACGCCCCGCCCCCCCCC‑TTCTCCTGCCCAGCGGACGTGGTTAGCA‑TTTAtt > 2:454579/1‑227 (MQ=255) tataCCACCGTTTACTGTGCAGATAATGACCAAAAGCAATATGCGTCACACTTTTCTGGTGACAACGTCACAAAATGGCGGTCGTCAATCGTGACGAACAGCACAAACGCCCTTTCTCATCGAAGATTTCAATCTGCCAGACCTGGTGACGCGAACCGAG‑ATGCAACGGTTTGCATACGCCCCGCACCCGCCC‑TTCTCATGCGGCGTGGACGGGGTTAGCA‑TTTAtt > 2:375810/1‑227 (MQ=255) tataCCACCGTTTACTGTGCAGATAATGACCAAAAGCAATATGCGTCACACTTTTCTGGTGACAACGTCACAAAATGGCGGTCGTCAAACGTGCAGCACAGCACAAAAGCCCTTTCTCATCGAAAGTTTCAATCTCCCCGACCTGGTGACGCGAAACGAG‑ACGCACCGGCTTTCCTACGCCCCGGCCCCCCCC‑CTCTCCTGCCCAGccggaggggttcggcttttgt > 1:584122/1‑207 (MQ=255) accaccGTTTACTGTGCAGATAATGACCAAAAGCAATATGCGTCACACTTTTCTGGTGACAACGTCACAAAATGGCGGTCGGCAATCGTGACGAACAGCACAAACGCCCTTTCTCATCGAAGATTTCAATCTTCCAGACCCGGGTACCCAAACCACGTATCCACGGGTTTGTAAAC‑CCCCCCCCCCCCCC‑CTCTCTTGCCCGGCGGCAGCGGTTAACC‑TTGATTTc > 1:490591/1‑226 (MQ=255) caccGTTTACTGTGCAGATAATGACCAAAAGCAATATGCGTCACACTTTTCTGGTGACAACGTCACAAAATGGCGGTCGTCAATCGTGACGAACAGCACAAAAGCCCTTTCTCATCGAAGATTTCAATCTGCCAGACCTGGTGACGCGAACCGAG‑ATGCAACGGTTTGCCTATGCCCCGCACCCGCCC‑TTCTCGTGCCGAGGCGACGGGGTTTGCA‑TTGCTTTCCAGa > 2:555987/1‑228 (MQ=255) tttACTGTGCAGATAATGACCAAAAGCAATATGCGTCACACTTTTCTGGTGACAACGTCACAAAATGGCGGTCGTCAATCGTGACGAACAGCACAAACGCCCTTTCTCATCGAAGATTTCAATCTGCCAGACCTGGTGACGCGAACCGAG‑ATGCAACGGTTTGCATACGCCGCGCa < 1:559021/176‑1 (MQ=255) tttACTGTGCAGATAATGACCAAAAGCAATATGCGTCACACTTTTCTGGTGACAACGTCACAAAATGGCGGTCGTCAATCGTGACGAACAGCACAAACGCCCTTTCTCATCGAAGATTTCAATCTGCCAGACCTGGTGACGCGAACCGAG‑ATGCAACGGTTTGCAAACGCCGCGCa > 2:559021/1‑176 (MQ=255) tttACTGTGCAGATAATGACCAAAAGCAATATGCGTCACACTTTTCTGGTGACAACGTCACAAAATGGCGGTCGTCAATCGTGACGAACAGCACAAACGCCCTTTCTCATCGAAGATTTCAATCTGCCAGACCTGGTGACCCGAACCCAA‑ATGCAACGGTTTGCCTACGCCCCGCCCCCGCCC‑TTCTCGTGCCGAGCGGACGTGGTTAGCA‑TTGATTTCCATaccca > 2:148186/1‑225 (MQ=255) tttACTGTGCAGATAATGACCAAAAGCAATATGCGTCACACTTTTCTGGTGACAACGTCACAAAATGGCGGTCGTCAATCGTGACGAACAGCACAAAAGCCCTTTCTCATCGAAGATTTCAATCTGCCAGACCTGGGGACGCGAACCCAG‑ATGCAACGGGTTGCATACGCCCCGCAACCCCCC‑TTCTCGTGCCGCGCGGGCCGGGTTAGCA‑TTGACTTCACGacccca > 2:282657/1‑225 (MQ=255) tttACTGTGCAGATAATGACCAAAAGCAATATGCGTCACACTTTTCTGGTGACAACGTCACAAAATGGCGGTCGTCAAACCTGACGAACAGCACAAAAGCCCTTTCTCATCCACGAGTTTAAACTTCCAGACCTCGTGGCGCGACCCGAG‑GTCCACAGGGTTGCTTACGCCCCCCACCCCCCC‑TCCCCCGTCCCAGCGGACGCGCGTGGCA‑TTTAGTTCCaagccca > 1:440464/1‑221 (MQ=255) tgCAGATAATGACCAAAAGCAATATGCGTCACACTTTTCTGGTGACAACGTCACAAAATGGCGGTCGGCAATCGTGACGAACACCACAAACGCCCCTTCTCCTCGAAAATTTCAATCTGCCAGACCTGGTGACGCGAACCCAG‑ATGCAACGGGTTTCCTACGCCGCCCCCCCCCCC‑TTCCCCTTCCGACCGCACGGGGGTAGCA‑TGAGTTTCCACAACAACCCCcttt > 1:285774/1‑228 (MQ=255) aaTAATGACCAAAAGCAATTGGCGTTCCCCTTTTGTGGGGACAACGTCACAAAATGGCGGTCGTCAATCGTGACGAACAGCCCAAGCGCCCTTTCCCATCGAATATTTCAATCTGCCAGACCTGGTGACGCGAACCGAG‑ATGCAACGGTTTGCATACGCCGCGCACCCGCCC‑TTCTCGTGCCGAGCGGACGTGGTTAGCA‑TTGATTTCCAGACCAACCACTTTTTGCt < 1:555987/227‑1 (MQ=255) aTAATGACCAAAAGCAATATGCGTCACACTTTTCTGGTGACAACGTCACAAAATGGCGGTCGTTAATCGTGACGAACAGCAACAACCCCCTTTCTCATCGAAGATTTCAATCTGCCAGGCCTGGTGACGCGAACCGAG‑ATGCAACGGTTTGCATACGCCGCGCACCCGCCC‑TTCTCGTGCCGAGCGGACGTGGTTAGCA‑TTGATTTCCAGACCAACCACTTTTTGCTc < 2:581429/228‑1 (MQ=255) tcccAAAAGCTATTTGCGTCACGTTTTTCTGGTGACAACGTCACAAAATGGCGGTTGTCAATCGTGACGAACAGACAAAACGCCCTTTCCCATCGAAGATTTCAATCTGCCAGACCTGGTGCCGCGAACCGAG‑ATGCAACGGTTTGCATACGCCGCGCACCCGCCC‑TTCTCGTGCCGAGCGGACGTGGTTAGCA‑TTGATTTCCAGACCAACCACTTTTTGCTCACCtt < 1:100941/226‑1 (MQ=255) gtccAAAAGCACTATGCGTCACACTTTTCTGGTGACAACGTCACAAAATGGCGGTCGTCAATCGTGACGAACAGCACAAACGCCCTTTCTCATCGAAGATTTCAATCTGCCAGACCTGGTGACGCGATCCGAG‑ATGCAACGGTTTGCATACGCCGCGCACCCGCCC‑TTCTCGTGCCGAGCGGACGTGGTTAGCA‑TTGATTTCCAGACCAACCACTTTTTGCTCACCtt < 2:570045/226‑1 (MQ=255) gACCAAAGGAAATATGCGTCCCCCATTTCTGTGGACAACGCCCAAAAATGGCGTCCGTCAATCTGGACGAACAGCACAAACGCCCTTTCTCATCGAAGATTTCAATCTGCCAGACCTGGTGACGCGAACCGAG‑ATGCAACGGTTTGCATACGCCGCGCACCCGCCC‑TTCTCGTGCCGAGCGGACGTGGTTAGCA‑TTGATTTCCAGACCAACCACTTTTTGCTCACCtt < 1:148186/228‑1 (MQ=255) tGCGTCACACTTTTCTGGTGACAACGGCACAAAATGGCGGTAGTCCAGCGTGACGAACAGCACAATCGCCCTTTCTCATCGAAGATTTCAATCTGCCAGACCTGGTGACGCGAACCGAG‑ATGCAACGGTTTGCATACGCCGCGCACCCGCCC‑TTCTCGTGCCGAGCGGACGTGGTTAGCA‑TTGATTTCCAGACCAACCCCTTTTTGCTCACCTTCGGTACataaata < 2:637178/227‑1 (MQ=255) acacTTTTCTGGTGACAACGTCACAAAATGGCGGTCGTCAATCGCGACGAACAGCCCAAACGCCCTTTCTCATCGAAGATTTCAATCTGCCAAAACCGGGGACCCCAACCGAG‑ATTCAACGGTTTGCATACGCCCCCCACCCCCCC‑CTCTCCTTGCCAACGGGAGGGGGTAGCATTTGTTTACCAAACAACCCCCTTTTTGCTCCCCTTCTG‑ACataaaaaaaagaca > 1:569066/1‑222 (MQ=255) ttCTGGTGACAACGTCACAAAATGGCGGTCGTCAATCGTGACGAACAGCACAAACGCCCTTTTTCATCGAAGATTTCAAACTGCCAAACCTGGTGAAGCGAACCGAG‑GAGCAACGGTTTGCATACGCCGCGCACCCGCCC‑CTCTCTGGCCGAGCGGAAGCGGTTAGCG‑TTGATTTCCCAACACACCCCTTTTTTCTCACACTCGGTACatcaaacacgccaccgaac > 1:462921/1‑213 (MQ=255) aCAACGTCACAAAATGGCGGTCGGCAATCGTGACGAACAGCACAAACGCCCTTTCTCATCGAAGATTTCAATCTGCCAGACCTGGTGACGCGAACCGAG‑ATGCAACGGGTTGCATACGCCCCGCACCCGCCC‑CTCTCGTGCCGGGCGGACGTGGTTAGCA‑TTGTTTTCCAGACCAACCACCTTTTGCTCCCCTTCGGTCCATAAAAAACATGCAACGCAAccagaaca > 1:632530/1‑222 (MQ=255) gcacaAAATGGCGGTCGTCAATCGTGACCAACAGCACAAACGCCCTTCCTCATCGAAGATTTCAATCTGCCAGACCTGGTGACGCGAACCGAG‑ATGCAACGGTTTGCATACGCCGCGCACCCGCCC‑TTCTCGTGCCGAGCGGACGTGGTTAGCA‑TTGATTTCCAGACCAACCACTTTTTGCTCACCTTCGGTACATAAATAACCGGCAACGGAACCGATACTTTCGGc < 2:4075/227‑1 (MQ=255) ccggcgtcAATCTTGACGAACAGCCCAAACGCCCTTTCCCATCGAAGATTTCAATCTGCCAGACCTGGTTACGCGAACCGAG‑ATGCAACGGTTTGCATACGCCGCGCACCCGCCC‑TTCTCGTGCCGAGCGGACGTGGTTAGCA‑TTGATTTCCAGACCAACCACTTTTTGCTCACCTTCGGTACATAA‑‑AACCGGCAACGGAACCGATACTTTCGGCCAGTACCACGGAt < 2:462921/224‑1 (MQ=255) gtcgtcAATCGTGACGAACAGCACAAACGCCCTTTCTCATCGAAGATTTCAATCTGCCAGCCCTGGTGACGCGAACCGAG‑ATGCAACGGTTTGCATACGCCGCGCACCCGCCC‑TTCTCGTGCCGAGCGGACGTGGTTAGCA‑TTGATTTCCAGACCAACCACTTTTTGCTCACCTTCGGTACATAAATAACCGGCAACGGAACCGATACTTTCGGCCAGTACCACGGAt < 2:24934/228‑1 (MQ=255) aattggtgcagaccggctaaccGCCCTTTCTCATCGAAGATTTCAATCTGCCAGACCTGGTGATGCGAACCGAG‑ATGCAACGGTTTGCTTACGCCGCGCCCCCGCCC‑TTCTCGTGCCGAGCGGACGTGGTTAGCA‑TTGATTTCCAGACCAACCACTTTTTGCTCACCTTCGGTACATAAATAACCGGCAACGGAACCGATACTTTCGGCCAGTACCACGGATGctcct < 1:180836/207‑1 (MQ=255) tGACGAACAGCACAAACGCCCTTTCTCATCGAAGATTTCAATCTGCCAGACCTGGTGACGCGAACCGAG‑ATGCAACGGTTTGCATACGCCGCGCACCCGCCC‑TTCTCGTGCCGAGCGGACGTGGTTAGCA‑TTGATTTCCAGACCACCCACTTTTTGCTCACCTTCGGTACATAAATAACCGGCAACGGCACCGATACTTTCGGCCATTACCACAGATGCCCCCCCaac > 1:524128/1‑226 (MQ=255) cgaaaacaacaAACGCCCTTTCTCATCGAAGAGTACAAGCGGCCAGACCGGGGGACGCGAACCGAG‑ATGCAACTGTTGGCATACGCCGCGCACCCGCCC‑TTCTCGTGCCGAGCGGACGTGGTTAGCA‑TTGATTTCCAGACCAACCACTTTTTGCTCACCTTCGGTACATAAATAACCGGCAACGGAACCGATACTTTCGGCCAGTACCACGGATGCTCCTCCATgcag < 1:81869/220‑1 (MQ=255) aaCAGCACAAACGCCTTTTCCCATCGAAGATTTCAATCTGCCAGACCTGGTGACGCGAACCGAG‑ATGCAACGGTTTGCATACGCCGCGCACCCGCCC‑TTCTCGTGCCGAGCGGACGTGGTTAGCA‑TTGATTTCCAGACCAACCACTTTTTGCTCACCTTCGGTACATAAATAACCGGCAACGGAACCGATACTTTCGGCCAGTACCACGGATGCTCCTCCATgcagca < 2:285774/228‑1 (MQ=255) aCGCCCTTTCTCATCGAAGATTTCAATCTGCCAGACCTGGTGACGCGAACCGAG‑ATGCAACGGTTTGCATACGCCGCGCACCCGCCC‑TTCTCGTGCCGAGCGGACGTGGTTAGCA‑TTGATTTCCAGACCAACCACTTTTTGCTCACCTTCGGTACATAAATAACCGGCAACGGAACCGATACTTTCgg > 2:292622/1‑188 (MQ=255) cGCCCTTTCTCATCGAAGATTTCAATCTGCCAGACCTGGTGACGCGAACCGAG‑ATGCAACGGTTTGCATACGCCGCGCACCCGCCC‑TTCTCGTGCCGAGCGGACGTGGTTAGCA‑TTGATTTCCAGACCAACCACTTTTTGCTCACCTTCGGTACATAAATAACCGGCAACGGAACCGATACTTTCGGc < 1:292622/188‑1 (MQ=255) cGCCCTTTCTCATCGAAGATTTCAATCTGCCAGACCTGGTGACGCGAACCGAG‑ATGCAACGGTTTGCATACGCCGCGCACCCGCCC‑TTCTCGTGCCGAGCGGACGTGGTTAGCA‑TTGATTTCCAGACCAACCACTTTTTGCTCACCTTCGGTACATAAAAAACCGGCACCGGAACCGATCCTTTCGGCCGGAGCCACGAATGCCCTTCCAGCCGGACACCCGAAAgg > 2:620961/1‑227 (MQ=255) cTTTCTCATCGAAGATTTCAATCTGCCAGACCTGGTGACGCGAACCGAG‑ATGCAACGGTTTGCATACGCCGCGCACCCGCCC‑TTCTCGTGCCGAGCGGACGTgg > 2:461098/1‑104 (MQ=255) tttCTCATCGAAGATTTCAATCTGCCAGACCTGGTGACGCGAACCGAG‑ATGCAACGGTTTGCATACGCCGCGCACCCGCCC‑TTCTCGTGCCGAGCGGACGTGGt < 1:461098/104‑1 (MQ=255) taaacGAAGATTTCAATCTGCCAGGCCGGGGGCCGCGAACCGAG‑ATGCAACGGTTTGCATACGCCGCGCCCCCGCCC‑TTCTCGTGCCGAGCGGACGTGGTTAGCA‑TTGATTTCCAGACCAACCACTTTTTGCTCACCTTCGGTACATAAATAACCGGCAACGGAACCGATACTTTCGGCCAGTACCACGGATGCTCCTCCATGCAGCAACCCGAAAGGCTGCTTTGTc < 2:490591/224‑1 (MQ=255) agggaGATTTCAAATGGCCAGACCTGGTGACGCGAACCGGG‑AGGCAACGGGTTGCAAACGCCCGCCACCCGCCC‑TTCCCGTGCCGAGCGGACGTGGTTAGCA‑TTGATTGCCAGACCAACCACTTTTTGCTCACCTTCGGTACATAAATAACCGGCAACGGAACCGATACTTTCGGCCAGTACCACGGATGCTCCTCCATGCAGCAACCCGAAAGGCTGCTTTGTCcgc < 1:454579/224‑1 (MQ=255) cGAAGATTTCAATCTGCCAGACCTGGTGACGCGAACCGAG‑ATGCAACGGTTTGCATACGCCGCGCACCCGCCC‑TTCTCGTGCCGAGCGGACGTGGTTAGCA‑TTGATTTCCAGACCAACCACTTTTTGCTCACCTTCGGTACATAAATAACCGGCAACGGAACCGATACTTTCGGCCAGTACCACGGATGCTCCTCAATGCAGAAACCCGAAAGGCTGCTTTGTCcgcg > 2:507158/1‑228 (MQ=255) tttCAATCCGCCAGGCCTGGGTACGCGAACCGAA‑ATGCAACGGTTTGACTACCCCGCCCCCCCGCCC‑TTCTCGTTCCGAGCGGACGTGGTTAGCA‑TTGATTTCCAGACCAACCACTTTTTGCTCACCTTCGGTACATAAATAACCGGCAACGGAACCGATACTTTCGGCCAGTACCACGGATGCTCCTCCATGCAGCAACCCGAAAGGCTGCTTTGTCCGCGAGTCTa < 2:642359/228‑1 (MQ=255) gCCAGACCTGGTGACGCGAACCGAG‑ATGCAACGGTTTGCATACGCCGCGCACCCGCCC‑TTCTCGTGCCGAGCGGACGTGGTTAGCA‑TTGATTTCCAGACCAACCACTTTTTGCTCACCTTCGGTACATAAATAACCGGCAACGGAACCGATACTTTCGGCCAGTACCACGGAt > 2:306179/1‑173 (MQ=255) ccAGACCTGGGGACGCGAACCGAG‑ATGCAACGGTTTGCATACCCCGCGCCCCCGCCC‑TTCTCGTGCCGAGCGGACGTGGTTAGCA‑TTGATTTCCAGACCAACCACTTTTTGCTCACCTTCGGTACATAAATAACCGGCAACGGAACCGATACTTTCGGCCAGTACCACGGATg < 1:306179/173‑1 (MQ=255) ggTGACGCGAACCGAG‑ATGCAACGGTTTGCATACGCCGCGCACCCGCCC‑TTCTCGTGCCGAGCGGCCGTGGTCAGCA‑TTGATACCCAGCCCAACCCATTTTTGCTCACCTTCGGTACCTAAATAACCGGCAACGGAACCGATACTTTCGGCACCTACCACGGATGCCCCGCCATTCAGCACCCCTAACTGCAGCTTTTTCCGCGAGTGTCCAGCCATTGTCGCTTCa > 1:514508/1‑227 (MQ=255) aTGCAACGGTTTGCAAACGCCCACCACCCGCCC‑TACTGGTGCCCGGCGGACGTGGTTAGCA‑TTGATTTCCAGACCAACCTCTTTTTGCTCCCCTTCGGTACATAAATAACCGGCAACGGAACCGATCCTTTCGGCCAGTACCACGGATGCTCCTCCATGCAGCAACCCGAAAGGCTGCTTTGTCCGCGAGTCTACTGGCATTGTCGCTTCAAGGGTGTCATCACCAat < 2:17345/228‑1 (MQ=255) tGCATACGCCGCGCACCCGCCC‑TTCTCGTGCCGAGCGGACGTGGTTAGCA‑TTGATTTCCAGACCAACCACTTTTTGCTCACCTTCGGTACATAAATAACCGGCAACGGAACCGATACTTTCGGCCAGTACCACGGATGCTCCTCCATGCAGCAACCCGAAAGGCTGCTTTTTCCGCGAGTCTACTGGCATTGTCGCTTCAAGGGTGTCATCCCCACGATGTTCAAAGc > 2:147720/1‑228 (MQ=255) actACGCCGCGCCCCCGCCC‑TTCTCGTGCCGCGCGGACGTGGTTAGCA‑TTGATTTCCAGACCAACCTCTTGTTGCTCACCTTCGGTACATAAATAACCGGCAACGGAACCGATCCTTTCGGCCAGTACCACGGATGCTCCTCCATGCAGCAACCCGAAAGGCTGCTTTGTCCGCGAGTCTACTGGCATTGTCGCTTCAAGGGTGTCATCACCAATATGTTCAAAGCGa < 2:569775/226‑1 (MQ=255) | AGTAGACATAGCATCCTCGCTTTTAGACAAGACCTGCACAGTATACCACCGTTTACTGTGCAGATAATGACCAAAAGCAATATGCGTCACACTTTTCTGGTGACAACGTCACAAAATGGCGGTCGTCAATCGTGACGAACAGCACAAACGCCCTTTCTCATCGAAGATTTCAATCTGCCAGACCTGGTGACGCGAACCGAG‑ATGCAACGGTTTGCATACGCCGCGCACCCGCCC‑TTCTCGTGCCGAGCGGACGTGGTTAGCA‑TTGATTTCCAGACCAACCACTTTTTGCTCACCTTCGGTACATAAATAACCGGCAACGGAACCGATACTTTCGGCCAGTACCACGGATGCTCCTCCATGCAGCAACCCGAAAGGCTGCTTTGTCCGCGAGTCTACTGGCATTGTCGCTTCAAGGGTGTCATCACCAATATGTTCAAAGCGA > NC_000913/1765114‑1765555 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |