| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,145,056 | T→G | 20.0% | G597G (GGT→GGG) | yegE → | putative diguanylate cyclase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,145,056 | 0 | T | G | 20.0% | 95.4 / 5.3 | 51 | G597G (GGT→GGG) | yegE | putative diguanylate cyclase |
| Reads supporting (aligned to +/- strand): ref base T (12/27); new base G (10/2); total (22/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.11e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACAACGGACCATTAATGGAGAACATTTACAGTGCCGACACCTCACGTTCCGCGATCGAGCAAGATGTGGTGTTGCACTGTCGGAGCGGCGGCAGTTACGACGTGCATTACAGTATTACGCCGTTAAGTACTCTGGACGGCAGCAATATTGGTTCGGTTCTGGTGATTCAGGACGTTACCGAATCACGCA > NC_000913/2144835‑2145282 | aggAATAAAGAAGGCGAAGTCGAACCGTTCCTCGGCATAAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCg < 1:72928/226‑1 (MQ=255) ggCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGGCCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAAGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑Ggtg < 2:173339/228‑1 (MQ=255) gCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGTGAAGATGGGCGGCTGGAAGCAGGAAGAAACGTTAGTGGTTcc > 2:72928/1‑214 (MQ=255) gCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAAAGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGTTATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAAATGAGCGGCTGGACGCAGGAAGAGACGTTTGGTGTTCCGCTCCTGCC‑Ggtgt > 2:133217/1‑228 (MQ=255) gAAGTCGAACCTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑g < 2:542050/228‑1 (MQ=255) ctcctcGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTTCGCTCCTTAC‑GGTGTT‑GCATATTACttt > 2:506086/1‑227 (MQ=255) ggCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGCGAAGATGAGCGGCTGGCCGCAGGAAGACGCGTTAGGGGGTCCGTTCCTGAC‑GGGGTT‑GCATATTACTTTTgtggca > 2:71643/1‑223 (MQ=255) caataaTATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTTTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACaa < 1:444887/224‑1 (MQ=255) cATTAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACaa < 2:247304/228‑1 (MQ=255) tCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGTGAAAACGGGCGGCGTGACGCCGGAAAAAAACGTGGGGGTTCCGGCCCTCAC‑GGGGTT‑GCAAAATAATTTTGGCGCAAACg > 1:268028/1‑228 (MQ=255) cAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACAACgg > 2:611484/1‑228 (MQ=255) aaaTATGGATATGGCCGAAGTGAAACAGCTTAAAGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTTCGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACAACgg < 1:621125/227‑1 (MQ=255) gATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGGAGCAGGAAAAAGCGTTAGGTGGTCTGCTCCTGAC‑GGGGTT‑GCAAATTAATTTTTGCGGCAAAgggaaacta > 1:247304/1‑221 (MQ=255) tGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTTCCCTCCTGGCGGGTGTT‑‑CAATGTACTTTTTGCGACCACGGAACATTAATgg > 2:282066/1‑228 (MQ=255) tGACCCGAGTGAAACCGGTTAACGGGGCATTGTTTCAGGAAAAAGAGCGTCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACAACGGACCATTAATgg < 1:127592/228‑1 (MQ=255) aCCGAAGTGGAACAGGTTAAGGTGGGTTTGGTTCAGGAAAAAAGGCGCCTGGACATTACGCTTGCTTCCATCGGTGAAGCCGTGGTCTGGAGTGAGATGGCGATGAAAATTACCTGTATGAATCCAGTGGGGTAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGTC‑GGTGTT‑GCATATTACTTTTGGCGACAACGGACCATTAATGgag < 1:225211/228‑1 (MQ=255) aCCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGGGTTCCGCCCCTGAC‑GGGGTT‑GCAAATTACTTTTGGCGACAACGGACCCTTAATgggg > 2:438579/1‑226 (MQ=255) aaGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGGCTT‑GCATATTACTTTTGGCGACAACGGACCATTAATGGAGaaaa > 2:65693/1‑226 (MQ=255) aCAGTTTAACGAGGCAGTGTTTTAGGAAAAAGGTCGCCTTCAAATTACGGTTGATTCCATCGGTGAAGCCGTGGTCTGTAGTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACAACGGACCATTAATGGAGAACATTTAc < 2:606750/226‑1 (MQ=255) cTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAAATGAGAGGGTGGACGCAGGGAGAAGAGTTAGTGGTTCCGCTCCCGGC‑GGGGTT‑GCCTCATACTTTTTGCGACACAGGACCCTTAAAGGAGAACATTTTCaaagcc > 1:326143/1‑223 (MQ=255) cATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAATAAGCGTTAGGGGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTTGCGACAACGGACCATTAATGGAGAAAATTTAAAGTGCCGACACCTCAc > 2:481668/1‑228 (MQ=255) aTTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGGGGCCGGACCGCGGAAGAATCGTTTGGGGTTCCGCTCCCGCG‑GGGGTTCGCA‑ATTTCTTTTTGGGCCAACGGGCCATTAATGGGGAGCAATTACAATGCCGAACCCTccac > 1:489214/1‑225 (MQ=255) tCAGGAAAAAGGTGGCCTGCACATTACGCTTGATTCCAGCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACAACGGACCATTAATGGAGAACATTTACAGTGCCGACACCTCACGTTCcgc < 1:479666/228‑1 (MQ=255) aaGAGCGCCTGCACATTTCGCTTGATTCCAGCGGTTAAGCCGTTGTCTGTATTGATATGGCGATGAAAATTTCCTTTATGAATCCAGTGGCGGAGAAGATGTGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACAACGGACCATTAATGGAGAACATTTACAGTGCCGACACCTCACGTTCCGCGATCGAGc < 1:71643/228‑1 (MQ=255) aaGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCCGTGGCGGGAAAGATGAGCGGCTGGAAGCAGGAAGAAGCGTTAGGTGTTCCCCTCCTTGC‑GGGGTT‑GCAGATTACTTTTTGCGACAACGGACCATTACTGGAGGACATTTACAGTTCCGACCCCCCAcactacccgataccgc > 1:464469/1‑213 (MQ=255) cTGCCCATTACGGTTGATTCCATCGGTTAAGGCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTAGGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACAACGGACCATTAATGGAGAACATTTACAGTGCCGACACCTCACGTTCCGCGATCGAGCAAGAtg < 1:438579/226‑1 (MQ=255) cTGCATATTCCGCTTTATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTAGGAAGCCAGTGGCGGAGAAGATGGGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACAACGGACCATTAATGGAGAACATTTACAGTGCCGACACCTCACGTTCCGCGATCGAGCAAGAtg < 1:481668/226‑1 (MQ=255) ccGTGTTTTGTTTTGATATGGGGATGAAAAATACCTTTATGAATCCAGTGGCGGAGAAGATGAGGGGCTGGACGCAGGAAGAAGGGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACAACGGACCATTAATGGAGAACATTTACAGTGCCGACACCTCACGTTCCGCGATCGAGCAAGATGTGGTGTTGCACTGTCGGAGCGGCGGCAGTTacg < 1:611484/228‑1 (MQ=255) ttgTCTGTTTTGATATGGCGATGAAAATTTCCTTTAGGAAATCAGTGGCGGGGAAGGTGGGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACAACGGACCATTAATGGAGAACATTTACAGTGCCGACACCTCACGTTCCGCGATCGAGCAAGATGTGGTGTTGCACTGTCGGAGCGGCGGCAGTTacgacg < 1:96415/226‑1 (MQ=255) gtctgtttttgaatggggcttgaaaTTACCGTTATGAAGTCAGGGGCGGAGAAAGTGAGCGGCTGGCAGCCGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACAACGGACCATTAATGGAGAACATTTACAGTGCCGACACCTCACGTTCCGCGATCGAGCAAGATGTGGTGTTGCACTGTCGGAGCGGCGGCAGTTACGACGTg < 1:44030/206‑1 (MQ=255) ggttggatatgatggcggttGAAAATTGACTTTATGAATCCAGGGGGGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACAACGGACCATTAATGGAGAACATTTACAGTGCCGACACCTCACGTTCCGCGATCGAGCAAGATGTGGTGTTGCACTGTCGGAGCGGCGGCAGTTACGACGTg < 1:529937/209‑1 (MQ=255) tCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACAACGGACCATTAATGGAGAACATTTACAGTGCCGACACCTCACGTTCCGCGATCGAGCAAGATGTGGTGTTGCACTGTCGGAGCGGCGGCAGTTACGACGTg < 2:434049/227‑1 (MQ=255) ttGATATGGCGATGAAAATTCCCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACAACGGACCATTAATGGAGAACATTTACAGTGCCGACACCTCACGTTCCGCGATCGAGCAAGATGTGGTGTTGCACTGTCGGAGCGGCGGCAGTTACGACGTGCATTa < 2:505210/226‑1 (MQ=255) ttGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑TCATATTACTTTTGGCGACAACGGACCATTAATGGAGAACATTTACAGTGCCGACACCTCACGTTCCGCGATCGAGCAAGATGTGGTGTTGCACTGTCGGAGCGGCGGCAGTTACGACGTGCATTa < 1:291121/226‑1 (MQ=255) ttGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACAACGGACCATTAATGGAGAACATTTACAGTGCCGACACCTCACGTTCCGCGATCGAGCAAGATGTGGTGTTGCACTGTCGGAGCGGCGGCAGTTACGACGTGCATTa < 2:489214/226‑1 (MQ=255) atatGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGGGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGc > 2:153243/1‑113 (MQ=255) tatGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCg < 1:153243/113‑1 (MQ=255) tgggtataaaaaTTACCTTTATGGATCCAGGGGCGGGGAAGATTGGCCGTTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCGTGAC‑GGTGTT‑GCATATTCCTTTGGGCGACAACGGACCATTAATGGAGAACATTTACAGTGCCGACACCTCACGTTCCGCGATCGAGCAAGATGTGGTGTTGCACTGTCGGAGCGGCGGCAGTTACGACGTGCATTACAGTATTa < 1:133217/220‑1 (MQ=255) gagATGAAATTTTCCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACAACGGACCATTAATGGAGAACATTTACAGTGCCGACACCTCACGTTCCGCGATCGAGCAAGATGTGGTGTTGCACTGTCGGAGCGGCGGCAGTTACGACGTGCATTACAGTATTACg < 1:282066/226‑1 (MQ=255) gCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACAACGGACCATTAATGGAGAACATTTTCAGTGCCGCCACCTCCCGTTCCGCGATCGGGCAAGATATGGTGTTGACATTTCGGCGCGGGGGCAGGTTCAACGTGCATAATAGAATTAc > 1:34215/1‑227 (MQ=255) gCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGGGTTCCGCTCCTGAC‑GGGGTT‑GCATATTACTTTTGGCGACAACGGACCATTAATGGGGAACATTTACAGTGCCGACACCTCACGTTCCGCGATCGGGCAAGATGTGGGGTTGCACTGTCGGAGCGCCGGCAGTTtcgcgctgccttcaagatttac > 2:366618/1‑208 (MQ=255) gCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGAGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACAACGGACCATTAATGGAGAACATTTACAGTGCCGCCACCTCACGTTCCGCGATCGAGCAAGATGTGGTGTTGCACTGTCGGAACGGAGGCAGTTACGACGTGCCTTACAGtcattc > 2:495717/1‑222 (MQ=255) gCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAAGAAAAAGCGTTAGGGGTTCCGCTCCTGGC‑GGGGTT‑GCATATTACTTTTTGCGACAACGGGCCATTAATGGAGAACATTTACAGTGCCGGCACCTCACGTTGCGCGATCGAGAAAGAGGTGGGGTTGGACTGGCGGAGCGGGGGAGGTTacacggcgcagtacagagatac > 1:624742/1‑207 (MQ=255) aaTTTCCTTTTGGAATCCCGGGGCGGAGAAGAGGGGCGGCGGGGCGCAGGAAGAAGCGTTAGGGGTTCCGCTCCTGAC‑GGTGTT‑GCATATTTCTTTTGGCGACAACGGACCATTAATGGAGAACATTTACAGTGCCGACACCTCACGTTCCGCGATCGAGCAAGATGTGGTGTTGCACTGTCGGAGCGGCGGCAGTTACGACGTGCATTACAGTATTACGCCGTTAAg < 1:366618/228‑1 (MQ=255) tATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACAACGGACCATTAATGGAGAACATTTACAGTGCCGACACCTCACGTTCCGCGATCGAGCAAGATGTGGTGTTGCACTGTCGGAGCGGCGGCAGTTACGACGTGCATTACAGTATTACGCCGTTAAGTACTCTGGa < 2:296251/228‑1 (MQ=255) ggaataggggggggtGGACGGAGGCAGGAGCGTTAGGGTTTCCGGTCCTGAC‑GGTGTT‑GCATATTGCTTTTGGCGGCAACGGACCATTAATGGAGAACATTTACAGTGCCGACACCTCACGTTCCGCGATCGAGCAAGATGTGGTGTTGCACTGTCGGAGCGGCGGCAGTTACGACGTGCATTACAGTATTACGCCGTTAAGTACTCTGGACGGCAGCAATATTggtt < 1:506086/214‑1 (MQ=255) aagaTGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACAACGGACCATTAATGGAGAACATTTACAGTGCCGACACCTCACGTTCCGCGATCGAGCAAGATGTGGTGTTGCACTGTCGGAGCGGCGGCAGTTACGACGTGCATTACAGTATTACGCCGTTAAGTACTCTGGACGGCAGCAATATTggtt < 2:89774/226‑1 (MQ=255) gACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACAACGGACCATTAATGGAGAACATTTACAGTGCCGACACCTCACGTTCCGCGATCGAGCAAGATGTGGTGTTGCACTGTCGGAGCGGCGGCAGTTACGGCGTGCATTAAAGTATTACGCCGTTAAGTACCCTGGACGGCAGCAATATTTGTTCGGTTCTGGTGGTTCa > 1:500709/1‑228 (MQ=255) gACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACAACGGACCATTAATGGAGAACATTTACAGTGCCAACACCTCACGTTCCGCGATCGAGCAAGATGTGGTGTTGCACTGTCGGAGCGGCGGCAGGTACGACGTGCATTACAGTATTACGCCGTTAAGTACTCTGGACGGCAGCACAATTgagtgcgttctgtcgcttcc > 2:136089/1‑209 (MQ=255) gaGGAAGTAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACAACGGACCAATAATGGAGAACATTTACAGTGCCGACGCCTCACGGTCCGCGATCGAGCAAGATGTGGTGTTGCACTGTCGGAGCGGCGGCAGTTACGACGTGCATTACAGTATTACGCCGTTAAGTACTCTGGACGGCAGCAATATTGGTTCGGTTCTGGTGATTCAGGa < 2:138079/226‑1 (MQ=255) aGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACAACGGACCATTAATGGAGAACATTTACAGTGCCGACACCTCACGTTCCGCGATCGAGCAAGCTGTGGTGTTGCACTGTCGGAGCGGCGCCCGTTACGACGTGCCTTCCAGTATTACGCCGTTAAGTACTCTGGCCTGCCGCAATCTTGGTTCGGTTCTTGTGATTCAGGCCGTTACCGAATCAc > 2:221538/1‑227 (MQ=255) gtgtTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTGGGCGACAACGGACCATTAATGGAGAACATTTGCAGTGCCGACACCTCACGTTCCGCGATCGAGCAAGATGTGGTGTTGCACTGTCGGAGCGGCGGCAGTTACGACGTGCATTACAGTATTACGCCGTTAAGTACTCTGGACGGCAGCAATATTGGTTCGGTTCTGGTGATTCGGGACGTTACCGAATCACGCa < 2:326143/228‑1 (MQ=255) | CTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGAC‑GGTGTT‑GCATATTACTTTTGGCGACAACGGACCATTAATGGAGAACATTTACAGTGCCGACACCTCACGTTCCGCGATCGAGCAAGATGTGGTGTTGCACTGTCGGAGCGGCGGCAGTTACGACGTGCATTACAGTATTACGCCGTTAAGTACTCTGGACGGCAGCAATATTGGTTCGGTTCTGGTGATTCAGGACGTTACCGAATCACGCA > NC_000913/2144835‑2145282 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |