| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,374,671 | T→G | 24.4% | T111P (ACG→CCG) | menE ← | O‑succinylbenzoate‑CoA ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,374,671 | 0 | T | G | 24.4% | 64.2 / 2.2 | 45 | T111P (ACG→CCG) | menE | O‑succinylbenzoate‑CoA ligase |
| Reads supporting (aligned to +/- strand): ref base T (13/18); new base G (11/2); total (25/20) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.84e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACGGAATCAGCGATAACACACCTTGCGCACTGGCAAGATGGGCCTGATAAGTATGGACAGCGGCTTTCGGCAAACCGGTAGAACCCGAGGTCAACGTCATTGAGCACAGACGCGTCGGCTGCCACGTAGCGGCATGTGCGCCTTCAACCAGCTGAATGTGCAGCGA‑CGTTAATGCCGGAAACGTGTTTTCCCCATCCGGCACCAGAGCAAATTGCA‑GCGTCAGATTGGGCAGCAATTCTTCAAGCAACGGTTGCGGCAGCTGAGGGTTCACGGGCAACACCCGCGCCCCGCATTGCAGTAACGCCAGCCAGGCGAGCAGCGTTTGCGGCGTATTCCACGCCCGCAACATCACGCCGCTGCCCTCAACCACCCCCTGCACCGCAAATCCGGAGGCTA > NC_000913/2374453‑2374883 | ccgTAAAGAGAGCAACCAATCATCGTGACCCACAAACGGAATCAGCGATAACACACCTTGCGCACTGGCAAGATGGGCCTGATAAGTATGGACAGCGGCTTTCGGCAAACCGGTAGAACCCGAGGTCAACGTCATTGAGCACAGACGCGTCGGCTGCCACGTAGCGGCATGTGCGCCTTCAACCAGCTGAATGTGCAGCGA‑CGTTAATGCCGGAAACGTGTTTTccc < 2:252576/225‑1 (MQ=255) agCAACCAATCATCGTGATCGCCAAACGGAATCAGCGATAACACACCTTGCGCACTGGCAAGATGGGCCTGATAAGTATGGACAGCGGCTTTCGGCAAACCGGTAGAACCCGAGGTCAACGTCATTGAGCACAGACGCGTCGGCTGCCACGTAGCGGCCTGTGCGCCTTCAACCACCTGAAAGTGCCGCAG‑CGTTAATGCCGGGAACGGGTTTTCCCCATCCGGccc > 2:640513/1‑225 (MQ=255) agCAACCAATCATCGTGATCGCCAAACGGAATCAGCGATAACACACCTTGCGCACTGGCAAGATGGGCCTGATAAGTATGGACAGCGGCTTTCGGCAAACCGGTAGAACCCGAGGTCAACGTCATTGAGCACAGACGCGTCGGCTGCCACGTAGCGGCATGTGCGCCTTTAACCAGCTGAATGTGCAGGGA‑CGTTAATTCCGGAAACGGGCTTTCCCCATCCGGCAc > 2:41632/1‑227 (MQ=255) agCAACCAATCATCGTGATCGCCAAACGGAATCAGCGATAACACACCTTGCGCACTGGCAAGATGGGCCTGATAAGTATGGACAGCGGCTTTCGGCAAACCGGTAGAACCCGAGGTCAACGTCATTGAGCACAGACGCGTCGGCTGCCACGTAGCGGCATGTGCGCCTTCAAACAGCTGAATGTGCAGCGA‑CGTTAATGCCGGAAACGGGTTTTCCCCAACCGGccc > 2:591611/1‑225 (MQ=255) agCAACCAATCATCGTGATCGCCAAACGGAATCAGCGATAACACACCTTGCGCACTGGCAAGATGGGCCTGATAAGTATGGACAGCGGCTTTCGGCAAACCGGTAGAACCCGAGGTCAACGTCATTGAGCACAGACGCGTCGGCTGCCACGTAGCGGCATGGGCGCCTTCAACCAGCGGCAAGTGCAGCGA‑CGTTAATGCCGGGAACCGGGTTTCCCCATCCCGCAcc > 2:68687/1‑228 (MQ=255) acAACCAATCCCTGTGATCGCCAAACGGAATTCGCGATAACCAACCTTTCGGACTGGCAAGATGGGCCTGGTAAGGATGGACAGCGGCTTTCGGCAAACCGGTAGAACCCGAGGTCAACGTCATTGAGCACAGACGCGTCGGCTGCCACGTAGCGGCATGTGCGCCTTCAACCAGCTGAATGTGCAGCGA‑CGTTAATGCCGGAAACGTGTTTTCCCCATCCGGCACCa < 1:185123/227‑1 (MQ=255) atcatcGTGATCGCCAAACGGAATCAGCGATAACACACCTTGCGCACTGGCAAGATGGGCATGATAAGTATGGACAGCGGCTTTCGGCAAACCGGTAGAACCCGAGGTCAACGTCATTGAGCACAGACGCGTCGGCTGCCACGTAGCGGCATGTGCGCCTTCAACCAGCTGTATGTGCCGAGACCGTTAA‑GCCGGAAACCTGTTTTTCCCATCTCGCACCAGCGCaaa > 2:257960/1‑228 (MQ=255) gATAACACACCTTGCGCACTGGCAAGATGGGCCTGATAAGTATGGACAGCGGCTTTCGGCAAACCGGTAGAACCCGAGGTCAACGTCATTGAGCACAGACGCGTCGGCTGCCACGTAGCGGCATGTGCGCCTTCAACCAGCTGAATTGGCAGCGA‑CGTTAATGCCGGAAACGTGTTTTCCCCATCCGGACCCCAAGCAAATTGCG‑GCGTCGGATTGGGCAGCAAttct > 2:71820/1‑228 (MQ=255) aaCACACCTTGCGCACTGGCAAGATGGGCCTGATAAGTATGGACAGCGGCTTTCGGCAAACCGGTAGAACCCGAGGTCAACGTCATTGAGCACAGACGCGTCGGCTGCCACGTAGCGGCATGTGCGCCTTCAACCAGCTGAATGTGCAGCGA‑CGGTAATGCCGGGAACGTGTTTTCTCCATCCCGCCCCAAGGCAAAATGCA‑CGGCCAGATTGGGCATGCAttcttc > 2:639569/1‑227 (MQ=255) ccTTGCGCACTGGCAAGATGGGCCTGATAAGTATGGACAGCGGCTTTCGGCAAACCGGTAGAACCCGAGGTCAACGTCATTGAGCACAGACGCGTCGCCTGCCACGTAGCGGCATGTGCGCCTTCAACCAGCTGAATATGCAGCGC‑CGGTAAAGCCGGAAACTGGTTTTCCCCACCCGGCACCACACCAACAAGCA‑ACGCCAGAAAGGGCAAAAAAACTTCaacaaaa > 1:285983/1‑223 (MQ=255) tGCGCACTGGCAAGATGGGCCTGATAAGTATGGACAGCGGCTTTCGGCAAACCGGTAGAACCCGAGGTCAACGTCATTGAGCACAGACGCGTCGGCTGCCACGTAGCGGCATGTGCGCCTTCAACCAGCTGAATGTGCAGCGA‑CGTTAATGCCGGGAACGCGTTTTCCCCATCCGGCACCAGAGCAAATTGCA‑GCGTCAGATTGGGCAGCCATTCTTCAAGCAACCGt > 2:499396/1‑228 (MQ=255) ggcagagttgtataagagcaaaaGTAGGGACAGCGGCTTTCGGCAAACCGGCAGAACCCGAGGTAAACTGCCTTGAGCACAGACGGGTCGGCTGCCACGTAGCGGCATGGGCGCCTTCAACCAGCTGAATGTGCAGCGA‑CGTTAATGCCGGAAACGTGTTTCCCCCATCCGGCACCAGAGCAAATTGCA‑GCGTCAGATTGGGCAGCAATTCTTCAAGCAACGGTTGCg < 1:569973/207‑1 (MQ=255) tGGCAAGATGGGCCTGATAAGTATGGACAGCGGCTTTCGGCAAACCGGTAGAACCCGAGGTCAACGTCATTGAGCACAGACGCGTCGGCTGCCACGTAGCGGCATGTGCGCCTTCAACCAGATGAATGTGCAGCGC‑CGCTAATGCCGGAAACGGGTTTTTCCCACCCCGCCCCAGAGAACATTGCACGCG‑CAGATTGGGCAGCAATTTTTCAAGCAAccggcgcgcca > 1:492906/1‑218 (MQ=255) ggCAAGATGGGCCTGATAAGTATGGACAGCGGCTTTCGGCAAACCGGTAGAACCCGAGGTCAACGTCATTGAGCACAGACGCGTCGGCTGCCACGTAGCGGCATGTGCGCCTTCAACCAGCTGAATGTGCAGCGA‑CGTTAATGCCGGGAACGGGTTTTCCCCATCCGGCCCCAGAGCAAATTGCA‑GCGCAAGATTGGGCCGCAATTCTTCAAGACACGGTTGCGGCAg > 2:300254/1‑228 (MQ=255) aaGGTGGGCCTGAAAAGTATGGACAGCGGCTTTCGGCAAACCGGTAAAACCCGAGGTCAACGTCATTGAGCACAGACGCGTCGGCTGCCACGTAGCGGCATGTGCGCCTTCAACCAGCTGAATGTGCAGCGA‑CGTTAATGCCGGAAACGTGTTTTCCCCATCCGGCACCAGAGCAAATTGCA‑GCGTCAGATTGGGCAGCAATTCTTCAAGCAACGGTTGCGGCAGCTg < 1:640513/228‑1 (MQ=255) ccTGATAAGTATGGACAGCGGCTTTCGGCAAACCGGTAGAACCCGAGGTCAACGTCATTGAGCACAGACGCGTCGGCTGCCACGTAGCGGCATGTGCGCCTTCAACCAGCTGAATGTGCAGCGA‑CGTTAATGCCGGGAACGTGGTTTCCCCATCCGGCACCAGAGCCAATTGCA‑GCGTCAGATTGGGCAGCAATTCTTCAAGCAACGGTTGCGGCacgtcgggggtc > 2:656640/1‑216 (MQ=255) ccTGATAAGTATGGACAGCGGCTTTCGGCAAACCGGTAGAACCCGAGGTCAACGTCATTGAGCACAGACGCGTCGGCTGCCACGTAGCGGCATGCGCGCCTTACACCCGCCGAATGTGCAGCGA‑CGTTACTGCCGGAAACGGGTTTTCCCCACCCGGCACCACAACACATTCCA‑GCGTGCGATTGTGCCCCAAATCTTCCAACAACGCTTCGGGCAGATGAGGGGTc > 1:437852/1‑227 (MQ=255) cggatagttATGGACAGCGGGTTTCGGCAAACCGGTAGGACCCGAGGTCAACGTCCTTGAGCCCAGGCGCGTCGGCTGCCACGGTGCGGCATGTGCGCCTTCAACCAGCTGAATGTTCAGCGA‑CGTTAATGCCGGAAACGTGTTTTCCCCATCCGGCACCAGAGCAAATTGCA‑GCGTCAGATTGGGCAGCAATTCTTCAAGCAACGGTTTCGGCAGCTGAGGGTTCa < 1:105151/219‑1 (MQ=255) aCAGCGGCTTTCGGCAAACCGGTAGAACCCGAGGTCAACGTCATTGAGCACAGACGCGTCGGCTGCCACGTAGCGGCATGTGCGCCTTCAACCAGCTGAATGTGCAGCGA‑CGTTAATGCCGGAAACGGGTTTTCCCCATCCGGCACCAGAGCAAATTGCA‑GCGTCGAATTGGGCAGCAATTCTTCAAGCAACGGATGCGGCAGCGGAGGGGTCCCGGGCAAAAACcgg > 1:176828/1‑227 (MQ=255) actgcgttttCGGCAAACCGGTTAAACCCCGTGGCAACCGCCTTGAGCACCGGCGCGTCGGCTGCCACGTAGCGGCATGTGCGCCTTCAACCAGCTGAATGTGCAGCGA‑CGTTAATGCCGGAAACGTGTTTTCCCCATCCGGCACCAGAGCAAATTGCA‑GCGTCAGATTGGGCAGCAATTCTTCAAGCAACGGTTGCGGCAGCTGAGGGTTCACGGGCAACACCcgcg < 1:300254/221‑1 (MQ=255) aGCGGCTTTCGGCAAACCGGTAGAACCCGAGGTCAACGTCATTGAGCACAGACGCGTCGGCTGCCACGTAGCGGCATGTGCGCCTTCAACCAGCTGAATGTGCAGCGA‑CGTTAATGCCGGAAACGTGTTTTCCCCATCCGGCACCAGCGCAAATTGCA‑GCGTCAGATTGGGCAGCAATTCTTCAAGCAACGGTTGCGGCAGCTGAGGGTTCACGGGCAACACCCccgc > 2:157422/1‑228 (MQ=255) cgcgCTTTCGGCACACCGGTAGACCCCGGGGGCAACGTCATTGAGCACAGACGCGTCGGCTGCCCGGTAGCGGCATGTGCGCCGTCAACCAGCTGAATGTGCAGCGA‑CGTTAATGCCGGAAACGTGTTTTCCCCATCCGGCACCAGAGCAAATTGCA‑GCGTCAGATTGGGCAGCAATTCTTCAAGCAACGGTTGCGGCAGCTGAGGGTTCACGGGCAACACCCGCGcc < 1:248841/225‑1 (MQ=255) cGGCTTTCGGCAAACCGGTAGAACCCGAGGTCAACGTCATTGAGCACAGACGCGTCGGCTGCCACGTAGCGGCATGTGCGCCTTCAACCAGCTGAATGTGCAGCGA‑CGTTAATGCCGGAAACGTGTTTTCCCCATCCGGCACCAGAGCAAATTGCA‑GCGTCAGATTGGGAAGCAATTCTTCAAGCAACGGTTGCGGCAGCTGCgggcggtcccttttacacaccccc > 2:569973/1‑206 (MQ=255) cGGCTTTCGGCAAACCGGTAGAACCCGAGGTCAACGTCATTGAGCACAGACGCGTCGGCTGCCACGTAGCGGCATGTGCGCCTTCAACCAGCTGAATGTGCAGCGA‑CGGTAATGCCGGAAACGGGTTTTCCCCCTCCGGCCCCCGAGCAAATTGCA‑GGGTCCGATTGGGCAGCAATTCTTCCAGCAACGGTTGCGGCCGCCGAGGGTTTACGGGGAaccacccccccc > 1:398694/1‑218 (MQ=255) cGGCTTTCGGCAAACCGGTAGAACCCGAGGTCAACGTCATTGAGCACAGACGCGTCGGCTGCCACGTAGCGGCATGGGCGCCTTCAACCAGCTGAATGGGCAGCGA‑CGTTAATGCCGGAAACGTGTTTTCCCCATCCGGCACCAGAGCAAATTGCA‑GAGTCCGCTTGGGCAGCAATTCTTCAAACAACGGGTTCGGCAGCTGAGGGTTTACGGGCAACAccccacccc > 2:433149/1‑222 (MQ=255) ggCTTTCGGCAAACCGGTAGAACCCGAGGTCAACGTCATTGAGCACAGACGCGTCGGCTGCCACGTAGCGGCATGTGCGCCTTCAACCAGCTGGATGTGCAGCGA‑CGTTAATGCCGGAAACGTGTTTTCCCCATCCGGCACCAGAGCAAATTGCA‑GCGTCCGATTGGGCAGCAATTCTTCAAGCAACGGTTGCGGCAGCTGAGGGGTCACCGGCAACACCCGCGcccc > 2:385982/1‑228 (MQ=255) cGGTACAACCCGGGGTCACCGTCATTGAGCACAGACGCGTCGGCTGCCACGTAGCGGCATGTGCGCCTTCAACCAGCTGAATGTGCAGCGA‑CGTTAATGCCGGAAGCGTGTTTTCCCCATCCGGCACCAGAGCAAATTGCA‑GCGTCAGATTGGGCAGCAATTCTTCAAGCAACGGTTGCGGCAGCTGAGGGTTCACGGGCAACACCCGCGCCCCGCATTGCAGTAACg < 1:378867/228‑1 (MQ=255) aaCGTCATTGAGCACAGACGCGTCGGCTGCCACGTAGCGGCATGGGCGCCTTCAACCAGCTGAATGTGCAGCGA‑CGTTAATGCCGGAAACGGGTTTTCCCCCTCCCGCACCCAACCAAATTGCC‑ACGTCAGATTGGGCAGCAATTCTTCAACCAACGGGTGCGGCAGCCTCGGGGTCCAGGGCAAACCCCCCACCCCCCCATGCAGTaaaccccccccagccgaaaga > 1:59821/1‑209 (MQ=255) ccttggaccacgccgcgTCGGCTGCCACGGAGGGGCATTGGCGCCTTCAACCAGCTGAATGTGCAGCGA‑CGTTAATGCCGGAAACGTGTTTTCCCCATCCGGCACCAGAGCAAATTGCA‑GCGTCAGATTGGGCAGCAATTCTTCAAGCAACGGTTGCGGCAGCTGAGGGTTCACGGGCAACACCCGCGCCCCGCATTGCAGTAACGCCAGCCAGGCGAGCAGCGTTTg < 1:656640/215‑1 (MQ=255) ggCACGGACGCGTTGCCTCCCACGTAGCCGCATGTGCGCCGTCAACCAGCTGAATGGGCAGCGA‑CGTTAATGCCGGAAACGTGTTTTCCCCATCCGGCACCAGAGCAAATTGCA‑GCGTCAGATTGGGCAGCAATTCTTCAAGCAACGGTTGCGGCAGCTGAGGGTTCACGGGCAACCCCCGCGCCCCGCATTGCAGTAACGCCAGCCAGGCGAGCAGCGTTTgcggcg < 1:385982/227‑1 (MQ=255) agcccaggcggctCGGGTTCCCCGTGGCGGCATGGGCGCCTTCAACCAGCGGAATGTGCGGCGA‑CGTTAATGCCGGAAACGTGTTTTCCCCATCCGGCACCAGAGCAAATTGCG‑GCGTCAGATTGGGCAGCAATTCTTCAAGCAACGGTTGCGGCAGCTGAGGGTTCACGGGCAACACCCGCGCCCCGCATTGCAGTAACGCCAGCCAGGCGAGCAGCGTTTgcggcg < 1:71820/216‑1 (MQ=255) cacaGACGCGTCGGCTGCCACGTAGCGGCATGTGCGCCTTCAACCAGCTGAATGTGCAGCGA‑CGTTAATGCCGGAAACGTGTTTTCCCCATCCGGCACCAGAGCAAATTGCA‑GCGTCAGATTGGGCAGCAATTCTTCAAGCAACGCTTTCGGCAGCCTAGGGTTCACGGGCAACACCCGACCCCCCCCTTTCAGTAAACCCAGCCCGCCGCGCAACGttttgggggt > 1:260534/1‑220 (MQ=255) gACGCGTCGGCTGCCACGTAGCGGCATGTGCGCCTTCAACCAGCTGAATGTGCAGCGA‑CGTTAATGCCGGAAACGTGTTTTCCCCATCCGGCACCAGAGCAAATTGCA‑GCGTCAGATTGGGCAGCAATTCTTCAAGCAACGGTTGCGGCAGCTGAGGGTTCACGGGCAACACCCGCGCCCCGCATTGCAGTAACGCCAGCCAGGCGAGCAGCGTTTGCGGCGTATTcc < 2:390200/228‑1 (MQ=255) cggctCGGCTGCCACGTAGCGGCATGTGCGCCTTCAACCAGCTGAATGTGCAGCGA‑CGTTAATGCCGGAAACGTGTTTTCCCCATCCGGCACCAGAGCAAATTGCA‑GCGTCAGATTGGGCAGCAATTCTTCAAGCAACGGTTGCGGCAGCTGAGGGTTCACGGGCAACACCCGCGCCCCGCATTGCAGTAACGCCAGCCAGGCGAGCAGCGTTTGCGGCGTATTCCAc < 2:533016/224‑1 (MQ=255) gCTGCCACGTAGCGGCATGTGCGCCTTCAACCAGCTGAATGTGCAGCGA‑CGTTAATGCCGGAAACGTGTTTTCCCCATCCGTCACCAGAGCAAATTGCA‑GCGTCAGATTGGGCAGCAATTCTTCAAGCAACGGTTGCGGCAGCTGAGGGTTCCCGGGCAACACCCCCGCCCCCCCTTGCAGTAACGCCAGCCAGGCGAGCACCGTTTTGGGCGCATTCCCCGcccccc > 1:570861/1‑225 (MQ=255) cgttgcggcctggtcggtttCAACCCGCCTAATGTGCAGCGT‑CTTTAATTGCGGAAACGGTTTTTCCCCATCCGGCACCAGGGCAAATTGCA‑GCGTTAGATTGGGCAGCAATTCTTCAAGCAACGGTTGCGGCAGCTGAGGGTTCACGGGCAACACCCGCGCCCCGCATTGCAGTAACGCGAGCCAGGCGAGCCGCGTTTGCGCCGTATTCCACGCCCGAAACATCa < 1:499396/209‑1 (MQ=255) tggcccccTGCAACCAGCTGAAGGTGCAGCGA‑CGTTAATGCCGGAAACGTGTTTTCCCGATCCGGCACCAGAGCAAATTGCA‑GCGTCAGATTGGGCAGCAATTCTTCAAGCAACGGTTGCGGCAGCTGAGGGTTCACGGGCAACACCCGCGCCCCGCATTGCAGTAACGCCAGCCAGGCGAGCAGCGTTTGCGGCGTATTCCACGCCCGCAACATCACGCCGCTGcc < 2:378108/221‑1 (MQ=255) cttctaccatcggaattgtgaGCGA‑CGTTAATGCCGGAAACGTGTTTTCCCCATCCGGCCCCAGAGCAAATTGCA‑GCGTCGGATTGGGGAGCAATTCGTCAAGCAACGGTTGCGGCAGCTGAGGGTTCCCGGGCAACACCCGCGCCCCGCATTGCAGTAACGCCAGCCAGGCGAGCAGCGTTTGCGGCGTATTCCACGCCCGCAACATCACGCCGCTGCCCTCAacc < 1:536456/207‑1 (MQ=255) ccacaaggtgaaggtagagcaccGTTAAGTCTGGAAACGGTCTTTCCCCATCCGGCCCCAGTGCAACGTGCA‑GCGTCAGTTTGGGCAGCAATTCTACAAGCCAGGGTTGCGGCATGCGGGGGTTCACGGGCAACCCCCGCGCCCCGCATTGCAGTAACGCCAGCCAGGCGAGCAGCGTTTGCGGCTTATTCCACGCCCGAAACATCACGCCGCTGCCCTCAaccacc < 1:506054/205‑1 (MQ=255) cTGAATGTGCAGCGA‑CGTTAATGCCGGAAACGTGTTTTCCCCATCCGGCACCAGAGCAAATTGCA‑GCGTCAGATTGGGCAGCAATTCTTCAAGCAACGGTTACGGCAGCTGAGGGTTCACGGGCAACACCCGCGCCCCGCATTGCAGTCACGCCAGCCAGCCGAACAGCGTTTGCGGCGTATTCCACGCCCGCCACATCACGCCGCTGCACCCAACCACCCCCTGCAc > 2:506914/1‑228 (MQ=255) aTGGGCAGCGA‑CGTTAATGCCGGAAACGTGTTTTCCCCATCCGGCCCCAGAGCAAATTGCA‑GCGTCAGATTGGGCAGCAATTCGTCAAGCAACGGTTGCGGCAGCTGAGGGTTCACGGGCAACACCCGCGCCCCGCATTGCAGTAACGCCAGCCAGGCGAGCAGCGTTTGCGGCGTATTCCACGCCCGCAACATCACGCCGCTGCCCTCAACCACCCCCTGCACCGCa < 2:398694/228‑1 (MQ=255) agagA‑CGTTTATGGCGGAAACGTGTTTTCCCCATCCGGCACCAGAGCAAATTGCA‑GCGTCAGATTGGGCAGCAATTCTTCAAGCAACGGTTGCGGCAGCTGAGGGTTCACGGGCAACACCCGCGCCCCGCATTGCAGTAACGCCAGCCAGGCGAGCAGCGTTTGCGGCGTATTCCACGCCCGCAACATCACGCCGCTGCCCTCAACCACCCCCTGCACCGCAAATCCg < 1:288153/225‑1 (MQ=255) gCGA‑CGTTAATGCCGGAAACGTGTTTTCCCCATCCGGCACCAGAGCAAATTGCA‑GCGTCAGATTGGGCAGCAATTCTTCAAGCAACGGTTGCGGCAGCTGAGGGTTCACGGGCAACACCCGCGCCCCGCATTGCAGTAACGCCAGCCAGGCGGGCAGCGTTTGCCGCGTATTCCCCGCCCGCAACACCAACCCGCGACCCCCACCCCCCCCCTTCCCCGGCAATccca > 2:308884/1‑226 (MQ=255) agggcgtttAATGCCGGAAACGTGTTTCCCCCAGCCGGCCCCGGAGCAAGTTGCA‑GCGTACGGTTGGGCAGCAATTCTTCAAGCAACGGTTGCGGCCGCTGAGGGTTCCCGGGCAACACCCGCGCCCCGCATTGCAGTAACGCCAGCCAGGCGAGCAGCGTTTGCGGCGTATTCCACGCCCGCAACATCACGCCGCTGCCCTCAACCACCCCCTGCACCGCAAATCCg < 1:68687/221‑1 (MQ=255) ttAATGCCGGAAACGTGTTTTCCCCATCCGGCACCAGAGCAAATTGCA‑GCGTCAGATTGGGCAGCAATTCTTCAAGCAACGGTTGCGGCAGCTGAGGGTTCACGGGCAACACCCGCGCCCCGCATTGCAGTAACGCCAGCCAGGCGAGCAGCGTTTGCGGCGTATTCCACGCCCGCAACATCACGCCCCTGCCCTCAACCACCCCCTGCCCCGCAAATCCGGGGGcca > 2:588868/1‑226 (MQ=255) | CGGTAAAGAGAGCAACCAATCATCGTGATCGCCAAACGGAATCAGCGATAACACACCTTGCGCACTGGCAAGATGGGCCTGATAAGTATGGACAGCGGCTTTCGGCAAACCGGTAGAACCCGAGGTCAACGTCATTGAGCACAGACGCGTCGGCTGCCACGTAGCGGCATGTGCGCCTTCAACCAGCTGAATGTGCAGCGA‑CGTTAATGCCGGAAACGTGTTTTCCCCATCCGGCACCAGAGCAAATTGCA‑GCGTCAGATTGGGCAGCAATTCTTCAAGCAACGGTTGCGGCAGCTGAGGGTTCACGGGCAACACCCGCGCCCCGCATTGCAGTAACGCCAGCCAGGCGAGCAGCGTTTGCGGCGTATTCCACGCCCGCAACATCACGCCGCTGCCCTCAACCACCCCCTGCACCGCAAATCCGGAGGCTA > NC_000913/2374453‑2374883 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |