| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,874,503 | T→C | 17.4% | G305G (GGA→GGG) | cysN ← | sulfate adenylyltransferase, subunit 1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,874,503 | 0 | T | C | 17.4% | 131.8 / 4.4 | 69 | G305G (GGA→GGG) | cysN | sulfate adenylyltransferase, subunit 1 |
| Reads supporting (aligned to +/- strand): ref base T (40/12); new base C (5/8); total (46/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.55e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTAATATCAACCTGATAGCGAATGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGG‑CTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑CCACCACTCGCTGGATCTCCACGGTTTCCAGCACTT > NC_000913/2874285‑2874729 | ttaATATCAACCTGATAGCGAATGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGG‑CTGTTCCGCCATCCATACCACATCCACCGCAGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCCCCA‑CAGCCAGATCGCCCCGGCCGATGTCGATCCCATCCGCCAGCACCAGGGGGAGCG‑C‑TTCTCCGGCaaaa > 1:127976/1‑227 (MQ=255)ttaATATCAACCTGATAGCGAATGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGG‑CTGTTCCGCCATCCATACCACATCCACCGACGGGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGCCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TCCTCCCGCaacg > 2:325025/1‑226 (MQ=255) tCAACCTGATAGCGAATGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGG‑CTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCTCCGGTAACGCTTCGTCTGCCGCCCGCAC‑CCGATCGCCACGGCAGATGTCGACCCCATCCGTCAGCCCCACGGCG‑TCGCC‑CTCTCCGGCAAAGGcttct > 1:647102/1‑228 (MQ=255) cAACCTGATAGCGAATGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGG‑CTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAC‑CCGATCCCCCCGGCCGCGGTCGATCCCATCCCTCCGCCCCCGGGTGACCG‑C‑TTCACCGGCCAAGGcttcat > 1:558570/1‑226 (MQ=255) cAACCTGATAGCGAATGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGG‑CTGTTCCGCCATCCATACCACATCCACCGACCCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCCCCCCGGCTGATGTCGATCTCATCCGTCAGCACCAGGGCGCACG‑C‑TTTCCCCGCAAAGGgttcct > 1:436081/1‑226 (MQ=255) ccTGATAGCGAATGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCATAACTCTGCCCTGGAGAAAGCGG‑CTGTTCCGCCATCCATACCACATCCACCGACGCGCTCCGCACCGCCGGTAACCCTTCGCCTGCCGCCAGCAG‑CCGACCGCCACGACGGACGTCGATCCCATCCGTCACCACCAGGGACACCG‑C‑TTCTCACGCAAAGGccacctcaa > 1:62187/1‑220 (MQ=255) aTAGCGAATGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGG‑CTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCCCGGCTGATGTCGCTCTCATCCGTCAGCCCCAGCGGGATCG‑C‑TTCTCCGGCAAAGGCTCCTTCCCGATc > 1:619178/1‑228 (MQ=255) aTAGCGAATGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGG‑CTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCTTCAGCACCAGGGGGATCG‑C‑TTCTCCGGCAAAGGCttcttcccccta > 1:644413/1‑222 (MQ=255) aTAGCGAATGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGG‑CTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCCCGAt > 2:359783/1‑227 (MQ=255) aaTGCCATCCACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGG‑CTGTTCCGCCACCCATCCCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTCCCGCCACCCG‑CAGAACGCCCCCGCTGAGATCGAGCACATCCATCACCACCCGGTGTATCC‑C‑TTCCCCGGCaaatgacttttaccggcccccccc > 1:538626/1‑207 (MQ=255) aaTGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCCTAACTCTGCCCTGCAGAAAGCGG‑CTCTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTCACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCCCGGCTGACTCCGATCTCACCTGCCCGCCCCCTGCTCCTCC‑C‑TTATCCGCCAAAGCCCTCTTCCCTACCACCAt > 1:387136/1‑227 (MQ=255) aaTGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGGCGGAACTCTGCCCTGGAGAAAGCGG‑CTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGGAGGCCTCCAGCAG‑CACATCGCAACGGCCGATGCAGATGTCATCCGTCAGCCCCACAG‑GATAG‑CGTTCTCCGGCACAGGCCGCTCCGCGTACAccca > 1:448002/1‑225 (MQ=255) aTGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGG‑CTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CCGATCGCCACGGCTGATGTCAACCTCTTCCGCCAGCACCACGGTGACCC‑C‑TCCTCCGGCAAAGGCTCTTTCCCGCTCACCaac > 1:655966/1‑225 (MQ=255) cAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGG‑CTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGGGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTcc > 2:370084/1‑227 (MQ=255) cgcgcgTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGG‑CTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGCCGATCTCATCCGTCAGCACCAGGGCGATCA‑C‑TTCTCCGGCAAAGGCTTCTTCCCGATCACCCTCCAAAGTCACGATCcgc > 2:89041/1‑227 (MQ=255) cgcgcgTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGG‑CTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCACAAG‑CAGATCGCCACGGCTGATGTCGCTCTCATCCGTCAGCCCCAGGGAGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGACACGATCcgc > 2:655191/1‑227 (MQ=255) cgcgTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGG‑CTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACCGCTGATGTCGATCTCATCCATCAGCACCAGGGAGATCG‑C‑CTCCCCGGCAAAGGCTCCTTCGCGATCACCATCCAAAGTCACGATCcccgg > 1:627940/1‑226 (MQ=255) cgcgTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGG‑CTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAACTCGCCACGGCCGATGTCGGTCTCCTCCGTCAGCCCCAGGGTGATCG‑C‑TTCCCCGGCCAAGGCCTCTTCCCCATCACCATCAAAAGCCACCATCcgcag > 1:504295/1‑225 (MQ=255) taataggagccagccgaaaCTCTGCCC‑GGGGAAAACGGTCTCTCCCCCCACCCATCCCACACCCACGGCCGCGCTCGGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑Cca < 2:21329/210‑1 (MQ=255) gCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGG‑CTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑Ccac > 2:13350/1‑227 (MQ=255) tGCCCTGGAGAAAGCGG‑CTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCT‑C‑TTCTCCGGCAAAGGCTTCTTCGCGTTCACCATCAAAAGTCACGATCCCCGCG‑ACGTTTGATT‑CCCCACCAAAGGGCAGAACttgaa > 1:316848/1‑223 (MQ=255) gCCCTGGAGAAAGCGG‑CTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCCCGGCTGATGTCGCTCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCCTCTTCGCCATCACCATCCAAAGTCACCATCCCCGCG‑ACCTTTGATT‑CACAACCAGAGGGCACACCTTTGac > 1:380095/1‑226 (MQ=255) gCCCTGGAGAAAGCGG‑CTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCCCGATCACCATCAAAAGTCACGATCCGCCCG‑ACGTTTGATT‑CCACACCCGCGGGCAGCACTTTGaca > 2:354343/1‑227 (MQ=255) cccTGGAGAAAGCGG‑CTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCCCGCTCCCCATCAAAAGCCACAGTCCCCCCG‑ACGTTTGATT‑CCCAACCCAAGGgccgtgctcttaa > 1:21329/1‑214 (MQ=255) gagaAAGCGG‑CTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑Ttct > 2:83474/1‑137 (MQ=255) gagaAAGCGG‑CTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGCCAGCACTTTGACACGTTGc > 2:246434/1‑227 (MQ=255) gaAAGCGG‑CTCTCCCGCCACCCCTCCCACCTCCCCCGCCGCGCTCGCCCCCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGcc < 2:267590/226‑1 (MQ=255) agcggg‑CTGTTCCGCCTCCAATCCCCCACCCACCGCCGCGCTCTGCCCCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGAc < 2:619178/224‑1 (MQ=255) aGCGG‑CTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGCTCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCCCCATCAAAAGTCACGATCCCCGCG‑CCGTTTGCTT‑CCCCACCACAGGGCCGCACTTTGACCCGTTGCCCCACt > 1:541391/1‑228 (MQ=255) aGCGG‑CTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGCTCACCATCAAAAGTCACGATCCGCCCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACCTTGACACAGTGCCCGACt > 2:134029/1‑228 (MQ=255) aGCGG‑CTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCCCACCAGAGGGCAGCACTTTGAAAAGTGGCCCgcc > 1:267590/1‑225 (MQ=255) cTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGCTGTCGATCTCCTCCGTCAGCCCCAGGGTGACCG‑C‑TTCTCCGGAAAAGGCTTCTTCGCGATCACCACCAAAAGTCACCACCCGCCCG‑ACGTTTGATT‑CCCCACCGAAGGGCAGCACTTTGACCCGTTGCCCCACTTTCaa > 1:649396/1‑227 (MQ=255) cTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCCCG‑CCGTTTGTTT‑CCACACCCGAGGGCAGCCCTTTGACACGTTGCCCGACTTCCa > 2:378264/1‑227 (MQ=255) aTCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGTCAAAGGCTTCTTCGCGATCACCATCACAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCATAGGTCAGCACTTTGACACGTTGCCCGCCTTCCACGCGCCCGGTGGCCAGCGTTcc > 2:184213/1‑228 (MQ=255) aTCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGATCCCCGACTTCCACGCGACCGGATTCCACCGTTcc > 2:347477/1‑228 (MQ=255) aTCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGGGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCCGAGGGAAGCACTTTCACACGTTGCCCGACTTCCACGCGACCGGTAGCCGACGTTcc > 1:309460/1‑228 (MQ=255) aTCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCACCACCAGGGGGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCCCGATCACCATCAAAAGTCACGATCCGCCCG‑ACGTTTGATTCCCACCCCA‑AGGGCAGCACTTTTACACGTTTCCCGCGTTCCACCCACCCGGAGTCCAGCGTTcc > 1:596749/1‑228 (MQ=255) gACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGGGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCACG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCCACCGGATGCCCGCGTTCCGGccgaa > 1:526843/1‑224 (MQ=255) gcgcTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGCTCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCT‑CCGTTTGATT‑CCACACCCGAGGGCCGCACTTTGCCCCGTTGCCCGCCTTCCCCGCGACCGATGGCCACCGTTCCGCCGTAcccc > 2:198785/1‑227 (MQ=255) gttcggccccgccgGTACCGCTTCGGCTGCCGCCAGCAG‑CAGTTCGCCAAGGCTGATTACGATCCCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACg < 2:316848/220‑1 (MQ=255) ccgGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGCAAATCGAGAt > 2:88515/1‑228 (MQ=255) cgGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCAACCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCCCGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGAAGCACTTTGACACGTTGCCCGACTTCCACCAGACCGGGTGCCAGCGTTCCGGGGCAACACCGAAAAtgcaaat > 1:433251/1‑221 (MQ=255) tAACGCTTCGTCTGCCGGCAGGAG‑CAGATCGCCCCGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGAACG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCgg < 1:13350/228‑1 (MQ=255) cTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGGCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGAt < 2:436081/228‑1 (MQ=255) tccgcTGCCTCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTa < 2:433251/224‑1 (MQ=255) tCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGGGATTCGGGCGAtt > 2:199347/1‑227 (MQ=255) tGCCGCCAGCCG‑CAGATCGCCACGGCTGATGGCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTa < 2:127976/228‑1 (MQ=255) tGCCGCCAGCAG‑CAGATGGCCCCGGCTGATGCCGATCTCATCCGTCAGCTCCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTa < 2:309460/228‑1 (MQ=255) gccggcAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCCCCGGCAAAGGCTTCTGCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTa < 2:380095/227‑1 (MQ=255) gccgccAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTa < 2:373452/227‑1 (MQ=255) ccAGCAG‑CAGACCGCCACGGCTGATGTCGATCTCACCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCa < 2:196289/228‑1 (MQ=255) gATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCCCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGGGATTAACCGAATGCCCCGGGAAgc > 1:638406/1‑228 (MQ=255) cGCCACGGCTGATGTCGATTGCATCCGTCAGCACCAGGGTGATCG‑C‑TTCGCCGGCAAAGGCTTCCTCGCGATCACCATCAAAAGTCACGATCCGCTCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑Ca < 2:596749/228‑1 (MQ=255) ttattcgcattcccgccGGCAGCCCCAGGGTGATCG‑C‑TTCCCCGGCAAAGGCTTCCTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑GCGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGa < 1:88515/212‑1 (MQ=255) acggatgagatcGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTCACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACTGAAATCGACATTCGGGCGATTAAGGTCCTTGACC‑GGAAGAGCCATTGGCTGAGCCT‑cc > 1:374057/12‑228 (MQ=255) tctcCTCCCTCCGCACCAGGGTGATCG‑G‑TTCCTCGGCAAAGGCTTTCTCGCGATCACCAACAAAAGTCACCATCCG‑GCGCACTTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑ccacca < 1:359783/228‑1 (MQ=255) tctcACCCGTCAGCACCAGGGTGAGCG‑C‑TTCTCCGGCAAAGGCTGCTTCGCGATCACCAGCAAAAGTCACGAACCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑ccacca < 1:89041/228‑1 (MQ=255) cccacccGTCAACACCATGGTTATCG‑C‑TCTACCGGAAAAGGCTTTTCCGCTATCACGATCAAAGGTCACGATCCGCGCG‑CTGTTTGATC‑CCACACCAGAGGGCCGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑ccacca < 1:347477/222‑1 (MQ=255) ccAGGGTTATCG‑C‑TTCCCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCC‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑CCACCACTCGCTGGATCTCCa < 2:644413/228‑1 (MQ=255) cAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAACTCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑CCACCACTCGCTGGATCTCCa > 2:122286/1‑227 (MQ=255) aGGGTGATCG‑C‑TTCCCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑CCACCACTCGCTGGATCTCCACg < 2:37861/228‑1 (MQ=255) aGGGTGATCG‑C‑TTCCCCCGCAAAGGCTTCTTCCCGATCCCCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACCCCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑CCACCACTCGCTGGATCTCCACg < 2:638406/228‑1 (MQ=255) gggTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCTGGCGATTAACGTACTGCACCGGGAAGGG‑CATTGTCCGAGCAT‑CCACCACTCGCGGGAACCCCACgg > 1:89142/1‑228 (MQ=255) aTCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCTGGCGATTAACGTACTGCACCGGGAATCG‑CATTGGCTGTGCAT‑CCCCCACTCGCTGGATATCCACGGTTTcc > 2:21444/1‑228 (MQ=255) aTCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑CCACCACTCGCTGGATCTCCACGGTTTc > 2:481791/1‑227 (MQ=255) aTCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGAAATTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACTACCTGCACCCGGAACCG‑CATTGGCACA‑CATACCACCACTCGCTGGTtccacccgtgttc > 1:92298/1‑216 (MQ=255) tCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCCCCGCGACGCG‑CATTGGCTGGGCAT‑CCCCCACTCCCTGACTACCCCCGGTTTccc > 1:46976/1‑227 (MQ=255) tccc‑TTCCCCGGCAAAGGTTTCTTCGCGATCCCCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGCCACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑CCACCACTCGCTGGATCTCCACGGTTTCCa < 2:243018/225‑1 (MQ=255) cG‑C‑TTCCCCGGCAAAGGCTTCTTCGCGATCCCCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑CCACCACTCGCTGGATCTCCACGGTTTCCa < 2:541391/227‑1 (MQ=255) cG‑C‑TTCACCGGCAAAGGCTTCTGCGCGATCACCATCAAAAGCCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑CCACCACTCGCTGGATCTCCa < 2:46976/218‑1 (MQ=255) ctcCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑cc > 1:247456/1‑62 (MQ=255) ctcCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGCGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAACTCGCGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑CAACCACTCGCTGGATCTCCCCGGGTTcaaaacctc > 1:551590/1‑220 (MQ=255) ctcCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGCCTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGCTTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑CAACCACTCGCTGGATCTCCACGGTTTcacgaactt > 2:164457/1‑220 (MQ=255) tcCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑Cca < 2:247456/62‑1 (MQ=255) | TTAATATCAACCTGATAGCGAATGCCATCAACACGCGCGCGCGTCTTCTTACCGGCAATTTTGATGTCGTAACTCTGCCCTGGAGAAAGCGG‑CTGTTCCGCCATCCATACCACATCCACCGACGCGCTCTGCACCGCCGGTAACGCTTCGTCTGCCGCCAGCAG‑CAGATCGCCACGGCTGATGTCGATCTCATCCGTCAGCACCAGGGTGATCG‑C‑TTCTCCGGCAAAGGCTTCTTCGCGATCACCATCAAAAGTCACGATCCGCGCG‑ACGTTTGATT‑CCACACCAGAGGGCAGCACTTTGACACGTTGCCCGACTTCCACGCGACCGGATGCCAGCGTTCCGGCGTAACCACGAAAATCGAGATTCGGGCGATTAACGTACTGCACCGGGAAGCG‑CATTGGCTGAGCAT‑CCACCACTCGCTGGATCTCCACGGTTTCCAGCACTT > NC_000913/2874285‑2874729 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |