| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,629,381 | T→C | 23.2% | S53G (AGC→GGC) | rbbA ← | ribosome‑associated ATPase: ATP‑binding protein/ATP‑binding membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,629,381 | 0 | T | C | 23.2% | 99.6 / 2.7 | 50 | S53G (AGC→GGC) | rbbA | ribosome‑associated ATPase: ATP‑binding protein/ATP‑binding membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (18/16); new base C (5/8); total (24/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.17e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCGCACTTCCCGCTCCGCTTTGTCGTGACCGAACAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCG‑CAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCA‑GGCCACGGAAGTTCTTCATTCACCCGCACCCACGCT > NC_000913/3629157‑3629600 | tCGCACTTCCCGCCCCGCTTTGGCGTGACCGAACAGGCGAGCGAAAAAATCGACGTTTTCATACCCCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCg < 2:71932/227‑1 (MQ=255) cGCACTTCCCGCTCCGCTTTGTCGTGACCGAACAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGGTTTTGCCCAGCGCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGAGGCTTCGGGTCGCGCATATCGCCGCCC‑AGCCCCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAAAGACAACAACCCCGa > 2:74782/1‑227 (MQ=255) ccgctTTGTCGTGACCGAACAGGCGATCGAAAAAATCGACGTTTTCAAACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGt < 2:327993/228‑1 (MQ=255) ccgctTTGTCGTGACCGAACAGGCGAGACAAAATATCGGCGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTGTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCGACGACAACAAGCTCGACTTCCCGACGCCGt < 2:63074/228‑1 (MQ=255) tGTCGTGACCGAACAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAAGGACAACAAGCCGGACTTCCCGACGCCGTCCggg > 2:209306/1‑227 (MQ=255) aCCGAACAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCC‑AGCACCATCACCTTGCCCTGTTCAATGACCCGGGCACCGGAAATCAACGACAACAAGCGCGACTTCCCCACGCCGTCCGGGCCACTCa > 2:273045/1‑227 (MQ=255) aCCGAACAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCC‑AGCACCATCACATTGCCCTGTTCAATGACCCGGGCACCGCAAATCAACGACAACAAGCCCGACTTCCCGACGCCGTCCGGGCCAATCAg > 2:312340/1‑228 (MQ=255) gAACGGGCGAGCGAAAAACTCGACGTTTTCATACCCCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGccc < 2:459002/228‑1 (MQ=255) cgaAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCATGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCTCCC‑AGCACCATCACATTGCCCTGTTCACTGACGCGGGCACCCGAAATCAACGACAACAAGCCCCACTTCCCGCCGCCGTCCGGGCCAATCAGCCCGACCAAACacc > 2:623102/1‑226 (MQ=255) tttctaacacCGAAAAGGTGTGGTGGAGGTTTTTGCCCAGCCCCTGCGGGATACAGGCGATGCGCGGGCAGACGTCGGGGCGGTGCTTCGGGTCGCGCATATCGCCGCCC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCga < 1:137736/222‑1 (MQ=255) catcccccggaaaGGTGGGGTAGGGGTTTTTGCCACGCCCCGGCGGCCTCCAGGGCATGCGCGGGGAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGagag < 1:22108/217‑1 (MQ=255) cagacacCGACAAGGTGTGGTGGGGGTTGTGGCCCAGCCCCTGGGGCAGCCAGGCGAGGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGAGCATATCGCCGGCC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCTCCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGagag < 1:199278/225‑1 (MQ=255) cATCCACCGACAAGGTGTGGTAGAGTTTTTTCCCCAGCCCCTGCGGCGTCCGGGCGATGCGCGGGCATACGTCGCGGCGATGCGTCGGGTCGCGCATATCGCCGCAC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGagag < 1:209306/228‑1 (MQ=255) cATACCCCGGAAGGGTGGGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGAGGCGCGGGCAGACGTTGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGagag < 1:565615/228‑1 (MQ=255) cGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGCCAACAAGCTCACCTTCCCGCCGCCGTCCGGGCCAATCAGCCCGCCCATAACACGGGCCGGAATATCGACAGGGatat > 2:587951/1‑227 (MQ=255) cAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGtt < 2:447418/228‑1 (MQ=255) tgtgGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAgc > 2:217333/1‑227 (MQ=255) tgtgGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAgc > 2:391578/1‑227 (MQ=255) ggggagagGTTTTTCCCCAGCCCCGGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCG‑Ca < 2:441336/224‑1 (MQ=255) gTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCG‑CAAc < 2:218721/228‑1 (MQ=255) gTTTTTGCCCCGCCCCTTCGGCATCCAGGCGATGCCGGGGCAGACGTCGCGGCGATTCTTCGGGTCGCGCATATCGCCGCCC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCG‑CAACGGttt < 1:317038/227‑1 (MQ=255) gTTTTTGCCCAGCCCCTGCGGCATCCAGGCGCTGCGCGGGCAGACGTCGCGGCGCGGCTTCGGGTCGCGCATATCGCTGCCC‑AGCACCATCCCATTGCCCTGCTCAATGGCGCGGGCACCGGCAATCAACGCCAACAAGCCCGCCTTCCCGCCGCCGTCCGGGCCAATAAACCCGACACTACACCCGGCCGGAACACCGTCAGGGATATT‑TTCAACGCCAACGGtttt > 1:162183/1‑228 (MQ=255) gTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACACCAAGCTCGACTTCCCGACCCCGTCCGGGCCAATCAGCCCGACCACACGACGGGCCGGAATATCGGCAGGGACATTGTTCACCC‑CACCGGtttt > 1:441336/1‑228 (MQ=255) tttttGCCCAGCCCCGGAGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCG‑CAACGGttt < 2:28776/226‑1 (MQ=255) tttgtGCCCAGCCCCTGCGGCAGCCCGGCGATGCCCGGGGCGGAGTCGCGGCGATTCTTCGGGTCGCGCATATCGCCGCCC‑AGCACCATCACATTGCCCTTGTCAATGACGCGGGCCCCGGAAATCAACGACAACAAGCCCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCG‑CAACGGttt < 1:54860/226‑1 (MQ=255) tttGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGACCGACCATACATCGGGCCGGAATATCGAGAGTGATATTGGTCACCG‑CAACGGTTTTTc > 2:294141/1‑227 (MQ=255) gCCCCTGCGGCATCCAGGCGATGCGCGGGCAGCCGTCCCGGAGATGCTTCGGGGCGCGCATAGCGCCGCCC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCG‑CAACGGTTTTTCCATAATGc < 2:401858/227‑1 (MQ=255) gCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACACGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAACGGGCCGGGATATCGAGAGGGGTATTGTTCAGGG‑CCACGGCTTTTCCCTaaaccgggcaca > 1:222417/1‑218 (MQ=255) aTCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAACCAGCCCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCG‑CAACGGTTTTTCCCTAATGCTGGCTCAcgccc > 2:336635/1‑228 (MQ=255) gcgcGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGCAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGCATATCGGGAGGGATATTGTTCAAGC‑CAACGGTTTTTCCATAAAGCTGGCTCCCGCCCGCCAGtttgcg > 1:517407/1‑224 (MQ=255) ccgccGTCGCGGCGGTGTTGCGGTGCGGCCAAATCGCCGCCC‑AGCCCCATCCCATGGCCCTTTTCAATGCCGCGGGCACCGGAAATCAACGACAACAAGCGCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCG‑CAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAgg < 1:312340/223‑1 (MQ=255) gcctgcgcgGCGATGCTTCGGGTCGCGCATATCGCCGCCC‑AGCCCCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCG‑CAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGcg < 2:329262/222‑1 (MQ=255) gACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCG‑CAACGGTTTTTCCAAAATGCTGGCCCACGCCCCCCAGGTCCGCGACAAGcgg > 1:269422/1‑228 (MQ=255) ggttGCTTCGGGGCGCGCCATCCGCCGCCCAACCACCA‑CCCTTTGCCCTGTTCAAGGACGCGGGCACCGGAAATCAACGACAACAAGCCCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCG‑CAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAAc < 1:587951/224‑1 (MQ=255) cgATGCTTCGGGTCGCGCATATCGCCGCAC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCCACCATCCAGCGGGCCGGCATACCGAGAGTGACATTTTTCAGCG‑CAACGGTTTTTCCATAATCCGGCCTCCCGCCCCCCAGTTGcgcgcccgcggggagggggagc > 1:658168/1‑210 (MQ=255) cccccc‑acccccaccACATTGCCCGTTTCAAGCAGCGGGGCCCCGGAAATCAACGACACCAAGCCGGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGGGGGCCGGAATATCGAGAGTGATATTGTTCAGCG‑CAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCa < 1:336635/225‑1 (MQ=255) tCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCG‑CAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGCCAGGCGGGACGGGAACCAGTTGCCGATGCGGCCTTGCGGCAACCTCACCACCAg > 2:500330/1‑228 (MQ=255) ttcccgtttcaaatggccggggCCCCGGAAAACAACGACAACAAGCCCGACTTCCGGACGCCGGCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCG‑CAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGgtcgt < 1:391578/209‑1 (MQ=255) ttGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCG‑CAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGggcgt > 2:208528/1‑228 (MQ=255) ttGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCG‑CAACGGGTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGGGCCCCCGGCGGGACCGGAACCAATTCCAGACGCGCCCTTTCGGCCAcccaccccaggaggcgt > 1:171706/1‑213 (MQ=255) gTTCAATGACGCGGGCCCGGGAAAACAACGAAAACAAGCCCGTCTTCCCGACGCCGTCCGGGCCAAACAGCCCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCG‑CAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCA‑GGCCa < 2:222417/228‑1 (MQ=255) ttCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCG‑CAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCCGAGGGGCCATTGCGGCAACCTCACCACGAGGGCGGCA‑ggga > 2:338161/1‑224 (MQ=255) ccaggACCCGGGCACCGGAAACCAACGGCAACAAGCCCGACTTCCCGACGCGTGCCGGTCCAAGCAGCCCGACCAGACAGCGGGCCGGAATATCGAGAGGGATATTGTTCAGCG‑CAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCA‑GGCCACgg < 1:217333/224‑1 (MQ=255) tGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCG‑CAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCCGTTCCCGATGCGTCATTGCGCGAACCCCACCCCGAGGGCGTCA‑GGcccacgca > 2:285443/1‑221 (MQ=255) tGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCG‑CAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACCGGGACCAGTTCCAGATGCGTCCATGCGGCAACCCCCCCCCGAGGGCGTCA‑GGCCACGGaa > 2:565404/1‑227 (MQ=255) cgGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCG‑CAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCCGTTCCCGATGCGGCCATGCGGCGACCCCCCCACCAGGGGGGCAGGGCCCCGAAAGttc > 1:228349/1‑227 (MQ=255) cgGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCG‑CAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATCGGCCCTTGCGGACACGCCACCCCGCGGCCGCCC‑GGCCACCGAAGttctt > 1:175227/1‑228 (MQ=255) ccccggaaagccacccaaccaaGCGCGACTCCCCCGCCCCGGCCGGGCCAATGAGCCCGACCATACAGCGGGCCGGAATATCGAGAGGGATATTGTTCAGCG‑CAACGGTTGTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCA‑GGCCACGGAAGTTCttcatt < 1:273045/209‑1 (MQ=255) aaaTCAACCACAAAAAGCCCGACTTCCCGCGGCCGGCCGGGCCAATCCGCCCGACCAAACAGCGGGCCGGAATATCGAGAGGGATATTGTTCAGCG‑CAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCA‑GGCCACGGAAGTTCTTCATTCACCCg < 1:208528/228‑1 (MQ=255) acacaGCCCGACTTCCCGACGCCGTCCTGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCG‑CAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCA‑GGCCACGGAAGTTCTTCATTCACCCGCACCCACGCt < 2:228349/223‑1 (MQ=255) | TCGCACTTCCCGCTCCGCTTTGTCGTGACCGAACAGGCGAGCGAAAAAATCGACGTTTTCATACACCGACAAGGTGTGGTAGAGGTTTTTGCCCAGCCCCTGCGGCATCCAGGCGATGCGCGGGCAGACGTCGCGGCGATGCTTCGGGTCGCGCATATCGCCGCCC‑AGCACCATCACATTGCCCTGTTCAATGACGCGGGCACCGGAAATCAACGACAACAAGCTCGACTTCCCGACGCCGTCCGGGCCAATCAGCCCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCG‑CAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCA‑GGCCACGGAAGTTCTTCATTCACCCGCACCCACGCT > NC_000913/3629157‑3629600 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |