| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,638,184 | A→G | 26.0% | S182G (AGC→GGC) | pitA → | phosphate transporter, low‑affinity, tellurite importer |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,638,184 | 0 | A | G | 26.0% | 70.8 / 5.6 | 54 | S182G (AGC→GGC) | pitA | phosphate transporter, low‑affinity, tellurite importer |
| Reads supporting (aligned to +/- strand): ref base A (15/22); new base G (8/7); total (25/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.40e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGTACCTGGTACTTTGGTTTACCTGCATCCAGCTCTCATACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACT‑GGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGAGCG‑TGAAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACT > NC_000913/3637968‑3638408 | gctacctgtgtattgggTTTACCTGCATCCAGCTTTCATACGATGATTGGCGCGAGCATCGGGATTGGATGAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACT‑GGAGCGGCACCAAg < 2:207746/213‑1 (MQ=255) gtgttGGTTTACTTTACTTCAGTTCTAATACGCTGAGTGGCGCGCTCGTCGGGATTCGTTTAACCAATGCGTTGATGGCCGGGACGTCAGTGGTGGATTCAGTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACT‑GGAGCGGCACCAAGAAACG‑CGccc < 1:74427/225‑1 (MQ=255) tGGTTTACCTGCATCCAGCTCTCATACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTTGCGGTCTGATTTTCTTGCTTCCTCGCTTCT‑GGAGCGGCACCCAGAAACG‑CGCCC‑GTa > 2:367613/1‑227 (MQ=255) ccTGCATCCAGCTCTCATACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTTGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACT‑GGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCt < 2:430878/227‑1 (MQ=255) ccTGCATCCAGCGTTCATGCGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACT‑GGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCt < 2:197251/227‑1 (MQ=255) ccTGCAGCCAGCTCTCATACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACT‑GGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCt < 2:19985/227‑1 (MQ=255) cTGCATCCAGCTCTTATCAGGTAGTTGGGCCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACT‑GGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGa < 2:127659/228‑1 (MQ=255) tCCAGCTCTCATACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGGGTTTGCTGGCGGTCTGATTTTTTTTCTGCCTCGCGCCT‑GGGGCGGCACCCAGAAACA‑CGCCC‑CTTTCccccgctcccca > 1:653129/1‑220 (MQ=255) gCTCTCATACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGATTTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTTCTCCGCTACTGGGAGTGCCA‑CACTAAACG‑CGCCC‑GTATCGCCCTGACCCCAGCgg > 2:183946/1‑228 (MQ=255) aTACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCCATTGTC‑GGCCTGGGGTTTGCTGGCGGGTTGGTTTTTTTTTTGCGTCGCTCAT‑GGGGCGGCACCACGACCGG‑CGCTT‑TTATCCATCTGAcgcctccgccgagcg > 1:382590/1‑217 (MQ=255) tgcGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACT‑GGAg < 2:382590/178‑1 (MQ=255) aTTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTTTTTCCCCGTTCCCACT‑TGATCGGCACCAAGAAAAG‑CGCCC‑CTACCCCCCTGACCCCCACGGGGCG‑GGAaaaggaa > 1:463877/1‑228 (MQ=255) tGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCGATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGGGTTTGCTGGCGGTCTGATTTTCTTTCTGCGTCGCTCCT‑GGGGGGGGCACAAGAAACG‑CGCCC‑GTATCCACCCGACCCCCCCGGGGGG‑GGAAaaaaaaga > 1:619236/1‑228 (MQ=255) taaacaaagggtgtgatgaCGGGGCGGGTAGTGGGGGATCCCCTCAAATCCCCTGAAGTATTAAGTTTTTCCGGTTCTTGGATCTTTTCCCCGTGTGGC‑GGCCGGGGGTTTGCTGGGGTGCGAATTTTCTTGCTGCGTCGCTACG‑GGGGCGGCACCAAGAAGCG‑CGCCC‑GTACCCACCGGACCCAAGGGGGGCG‑TGAAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTc < 1:397977/215‑1 (MQ=255) aatggtttaatggCCGGGACGGTGGGGGTGGATGCCCTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACT‑GGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGAGCG‑TGAAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGAc < 2:338532/218‑1 (MQ=255) aagggtgtgatgaCCGGGACGGCCGGGGTGGAAGCACTCAATTTCCCGAAAGTATTAAGTATTTCCGGTTCCCTGATCGTTTCCCCTATTGTC‑GGCCGGTTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACT‑GGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGAGCG‑TGAAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGAc < 2:110958/220‑1 (MQ=255) tGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGGAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTTTTGCTTCGTCGCTACT‑GGGGCGGCCCCAAGAAACG‑GGCCC‑CTATTCACCTGACCCCACCGGAGCG‑TGCAAAGAAAGACGGCAAGAAAAA‑ACCGCCCTTCtcggccc > 2:34107/1‑221 (MQ=255) tGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGGTTTTCTTGCTGCCTCGCTCCT‑TGCGCGGCACCAAGAAACT‑CGCCC‑CGTTCCCCCCGCCCCCAACGGAGCG‑GCGAAAAAAAAACGGGAAGAAAAA‑accacccctccgggccgg > 1:601671/1‑216 (MQ=255) tGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACT‑GGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCCGCGGGGGG‑TGAAAAGAAAGACGGCAAGACAAA‑GCCTCCCtt > 2:397977/1‑219 (MQ=255) tgatgaCCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTTTTTCTGCGTCGCTACT‑TGGACGGCACCAAAAAAAG‑CGCCC‑TTTTTCACCTGCCCCCCGCGGCGCG‑TGAAAAACAAAACGGACAGAAAAA‑ACCGCCGGTATggggccgaattt > 1:502264/1‑218 (MQ=255) cGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCCCTACT‑GGAGCGGCACCAAGAAACG‑CGCCC‑GGATCCACCCGCACCCAGCGGAGCG‑TTGAAAGAAAGACGGCAAGAAAAA‑ACCGCCGTTCTGGACCCGCAtttggcggat > 2:206869/1‑220 (MQ=255) cGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTTTTGCCGCGTTGCTACT‑GGGGGGGGACCAAGGAAAG‑CGCCCGGTTTCCCCCTG‑CACCAACGGAGCG‑TGCAAAAAAAAACGGCCAGAAAAACCCCGCCG‑ACTGGCCGCGGATTGCGCTGAGCCtgt > 1:473422/1‑226 (MQ=255) ttCAGTGGTATATGTACTCCATTCCACGAAAGTATTAGTTATTTGCGTTTCTCTGATCGTCTCCCCTGTTGTC‑GGCCTGTTTTTTGCTGGCGGTCTGATTTTCTTGCTGCGGCCCATCT‑GGGCCGGCACCAAGAAACG‑CGCCG‑GTTTCCACCTGACCCCAGCGGGGCG‑TGAAAAAAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCttgc < 1:256084/227‑3 (MQ=255) agggccagCACTCAATACCCGGAAAGTATTAAGGATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCGTGGGGTTTGCTGGCGGTCGGATTTTCTTGCTGCGTCGCTACT‑GGAGCGGACCCAAGAAACG‑CGCCC‑GTACCCACCTGACCCCAGCGGAGCG‑TGAAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTa < 2:60072/220‑1 (MQ=255) tatCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACT‑GGAGCGGCACCAAGAAACG‑CGCCC‑GGATCCACCTGACCCCAGCGGAGCG‑GGAAAAGAAAGAAGGCAAGAAAAA‑ACCGCCGTTCTGGACGCGACATGCGCTGATCCTTTCGGCTA‑TCGGCGT‑GGGGgtttt > 2:578429/1‑227 (MQ=255) cccGAAAGTTTTAAGGTTTTCGGGTTCTCTGCTCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCGTGCTGCGTCGCTACG‑GGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGAGCG‑TGAAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCa < 2:247596/228‑1 (MQ=255) cgggatgttttgatttttttcggttttcggACGGTTTCCCCT‑GTGTCGGGCCGGGTGTTTGCTGGCGGTCTTATTTGTTTGATGCGTCGCTGCT‑GGGGCGGCACCAAAAAACG‑CGCCC‑GTATCCACCTGACCCGAGCGGAGTG‑TAAAAAGAAAAACGGCAAGAAAAC‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCAc < 1:367613/212‑1 (MQ=255) cGAAAGTATTAATTATTTTCGGTTCTCTGATCGTTTCCCCTATTGCC‑GGCCTGGTGTTTGCTGGGGGTCTGATTTTCTTGCTGCGTCGCTACG‑GGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGAGCG‑TGAAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCAc < 2:619236/227‑1 (MQ=255) gAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTTCTGCGTCGCTACT‑GGAGCgg > 1:367228/1‑99 (MQ=255) aaaGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACT‑GGAGCGGc < 2:367228/99‑1 (MQ=255) aagtattaagtattTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTTGTTTTCTTGCTGCGTCGCTACT‑GGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGAGCG‑TGAAAAGAAAGACGGCAAGAACAA‑ACCGCCGTTCTGGACGCGTCTTGAGCTGAACCTTGCCGCTA‑TCGGCGG‑GGCGTTTTTGccccgac > 1:445393/1‑222 (MQ=255) aagtattaagtattTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACT‑GGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGGGCG‑TGAAAAGAAAGACGGCAAGAAAAA‑ACCGCCGTCTTGGCCGCGTTTTGCGCTGATCCTTTCCGCAA‑TCGGCGT‑TGCGGTTTTGCACcgcg > 1:143293/1‑228 (MQ=255) ttaagtattTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GTCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTAAT‑GGTGCGGCACCAAGAAACG‑CGCCC‑GTTTTCCCCTGACCCCCGCGGAGCG‑TGATAAGCAAGAAGGCCAGAAAAA‑CACGCCCCTCTGGACCCCGATTGCCCTGGTTCTTTCCGCCACTCGGCGG‑GCCTtttttccccgcgcggac > 1:420012/1‑215 (MQ=255) tttCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTTCGTCGCTACT‑GGAGCGGCACCAAGAAACG‑CGCCC‑GTATACACCTGACCCCAGCGGAGGG‑TGAAAAGAAAGACGGCCAGAAAAA‑ACCGCCGTTCTCGACCCGGATTGCGCTGTTCACTTCCGCCA‑TCGGAGTGGGCGTTTTccccggccgcgaccactgtca > 1:409137/1‑208 (MQ=255) tttCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACT‑GGGGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGAGCG‑TGAAAAGAAAAACGGCCAGAAAAA‑GCCCCCGTTCTGGACGCGGCTTTGGCCGAACCCTTCCGCCA‑TCGGCCTGGGGGTTTGCGCCCGGGGGGAAC‑GAAggcg > 1:132693/1‑226 (MQ=255) tttCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACT‑GGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGAGCG‑TGAAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACCCGCATTGCGCTGATCCTTTCCCCTA‑TCGGCGT‑CGCGTTTTCTCACCGGGCGGAC‑ACTGGTcc > 2:488332/1‑227 (MQ=255) tttCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACC‑TGGGCGGCCCCCAGAAACG‑CGCCC‑GTTTCCCCCTTACCCCCCCGGGGCG‑TGAAAAGAAAGACGGCCAGAAAAA‑ACCCGCGGTCTGGACACCGATTGCGCGTATCCTTTCCCCCA‑TCGCGGT‑GGGGTTTTTGccgcgcgcccacaagggtca > 1:588956/1‑209 (MQ=255) tcggttctcgttgtgTTTCCCTTAGTGTC‑GGCCTGGTTGTGGCGGGCGGTTCGGTTTGCGTGCTGCTTGCTTACT‑GGGGCGGCACAAATGAACG‑CGCCT‑GGTCCCACCTGCCCCCAGAGGAGCG‑TAAAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑a < 1:509163/214‑1 (MQ=19) tctcTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACT‑GGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCCGCGGAGCG‑TGGAAAGAAAGACGGCAAGAAAAA‑GCCGCCCGTCTGGACGCGTATTGCGCTGATCCTTTCCCCTA‑TAGGCGT‑GGCGTTTTCTGACgggccggaacaggtgcaaaaaagc > 1:457517/1‑206 (MQ=255) tctggaccttttCCCCTGTGTGC‑GGCCGGGTGTTTGCTGGCGGTCTGATTTTCGTGCTGCGTCGCTACG‑GGAGCGGCACAAAGAAACG‑CGCCG‑GTATCCACCTGACCCAAGGGGAGCG‑GGAAAAGAAAGCCGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCa < 1:488332/219‑1 (MQ=37) ctGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACT‑GGAGCGGCACCAAGAAACG‑CGCCC‑GTAACCACCTGACCCCAGCGGAGCG‑TGAAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGAc < 2:38057/155‑1 (MQ=255) gtttgTTTCCCCTTTTGTG‑GGCGTGGTGTTTGCGGGCGGTTGTATTTTCGTGCTGGGCCGCTAGG‑GGGGCGGCCACAAAAAACG‑CGCCC‑GTATCCACCGGCCCCCAGCGGGGGT‑TGAAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTgg < 1:614542/224‑1 (MQ=25) tttgTTCCCCCTTTTGTC‑GGGGTTGTGTTTGCTGGCGGTCTGATTTTGTTGCTGCGGCGCTACT‑GGAGCGGCACAAAGAAACG‑CGCCC‑GTACCCCCCTGCCCCCAGCGGAGTG‑TGAAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGt < 1:540536/225‑1 (MQ=38) tatgttttccctgtttccgggCCGGGTGTTTGCTGGCTGTCTGTTTTTTTTGCTGCGTCCCTACT‑GGAGCGGCACCAAAAAACG‑CTCCC‑GTACCCACCTGACCCCGGCGGAGCG‑TGAAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTgg < 1:131728/209‑1 (MQ=37) aTCTTTTCCCCGTTTGGC‑GGCCTGGTTTTGGGTGGCGGCTGGATTTCTTTGCGCGGTCGCTCCT‑GGGGGGGCACCAGAAAACG‑GGCCG‑ATATCCACCGGACCCCAGGGGGGGT‑GGAAAAGAAAAACGGCAAGAAAAG‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGt < 1:206869/228‑1 (MQ=19) ttgTTTCCCCTATTGGC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACT‑GGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGGGGAGCG‑TGAAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGt < 2:558355/225‑1 (MQ=255) atgtgtataagagacgtgcccTGGTGTTTGCTGTCGGTCTGATTTTCTTGCTGCGTCGCTACT‑GGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGAGCG‑TGAAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGTc < 2:154064/209‑1 (MQ=255) tCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACT‑GGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGAGCG‑TGAAAAGAAAGACGGCAAGAAAAA‑ACCCCCGGTCTGGACGCCGATTGCGCTGATCCTTTCCGCCA‑TCGGCGT‑GGGGGTTTTCCCCGGCGCGACC‑GACGGGCAG‑AAAAGCacttgggtggt > 1:558355/1‑217 (MQ=255) ggCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACT‑GGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGAGCG‑TGAAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGGGTTTTTTCACGGCCCGCAC‑GATGGTCCGAAAAGGCTTTGG‑CTGGGTTTGTTGGGattt > 2:204376/1‑227 (MQ=255) gCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACT‑GGAGCGGCACCCAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGAGCG‑GGAAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTCGACGCGGATTGCGCTGATCCTTTCCCCTA‑TCGGCGT‑GGGCTTTTTGCCCGGGGCGCACGGAGGGTAAG‑AAA‑GCAAGGGTCGGGGTCTGTTTGTTATGGTTGGCgcccgg > 1:569551/1‑223 (MQ=255) gggttgtttttCCTGTTGCGTCGCTATG‑GGAGCGGCCACAAGAAGCG‑CGCCC‑GTCTCCCCCTGACCCGAGGGGGGGG‑TGAAAAGAAAGACGGCAAGAAAAG‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCcagc < 1:418567/220‑1 (MQ=37) gtttgtgggcgcgcggacaggggAGGGGCACCAAGAAACG‑GCCCG‑GAAACCAGCTGACCCCAGCGGAGGG‑AAAAAAGAAGGTAGTGAAGAAAAG‑GCCGCCGGTCGGGACGAGTATTGCGCTGAGCCTTGCCGGGA‑TCGGCGG‑GGCGTTTTCGCATGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCg < 1:461648/207‑1 (MQ=255) ttctggggtgCTACG‑GGGGCGGCAACAAGAAAGG‑CGCCC‑TGAACCACCTGACCCCAG‑GGGGCGTTGAAAAGAAATACGGCAAGAAAAA‑GGCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCgtggtg < 1:34107/218‑1 (MQ=37) t‑GGAGCGGTCCCAAGAAACGCCGCCT‑GT‑CCCACTCGACCCCAGCGGAGCG‑TGAAAAGAAAGACGGCAAGAAAAA‑GCCGCCTTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACt < 2:454136/228‑1 (MQ=37) | GGTACCTGGTACTTTGGTTTACCTGCATCCAGCTCTCATACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTC‑GGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACT‑GGAGCGGCACCAAGAAACG‑CGCCC‑GTATCCACCTGACCCCAGCGGAGCG‑TGAAAAGAAAGACGGCAAGAAAAA‑GCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTA‑TCGGCGT‑GGCGTTTTCGCACGGCGCGAAC‑GATGGTCAG‑AAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACT > NC_000913/3637968‑3638408 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |