| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,765,515 | A→G | 26.1% | S1112G (AGT→GGT) | rhsA → | Rhs protein with putative toxin 55 domain, putative polysaccharide synthesis/export protein, putative neighboring cell growth inhibitor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,765,515 | 0 | A | G | 26.1% | 53.5 / 2.5 | 54 | S1112G (AGT→GGT) | rhsA | Rhs protein with putative toxin 55 domain, putative polysaccharide synthesis/export protein, putative neighboring cell growth inhibitor |
| Reads supporting (aligned to +/- strand): ref base A (25/12); new base G (12/4); total (37/17) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.48e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCG‑CCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAAT‑C‑CTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGC > NC_000913/3765296‑3765734 | aaCGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCCGTGTGGGGTTCCCG‑CCGGTGCTGGTGCAGATGCTCGACCGGCTGGCAAGTGAAAT‑C‑CTGGCTGCCCGGGTGGGGGGGGaa > 1:120227/1‑228 (MQ=255)aaCGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGGGGGGTTCCCG‑CCGGCGCTGGTGCAGATGCTCGACCGGCGGGGAAGGGAAAT‑C‑CTGGGTGACGGGGGGGGTggggga > 1:579595/1‑226 (MQ=11)aaCGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGGGTGGTGTTCCCG‑CCGGTGCTGGGGCAGATGCTCGCCCGGCTGGACAGTGAAAT‑C‑CTGGCTGCACGGGTGAGGGAGGaa > 2:619418/1‑228 (MQ=255)aaCGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGGGGGGTGTTCCCG‑CCGGTGCTGGGGCAGATGCTCGACCGGCTGGAAAGTGAAAT‑C‑CTGGCTGCCCGGGGGAGGGGGGaa > 1:248423/1‑228 (MQ=255) cGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGGGTTCCCG‑CCGGTGCTGGTGCAGCTGCTCGGCCGGCTGGAAAGTGAAAT‑C‑CTGGCTGACCGGGGGGGTGGGGAAAg > 2:951/1‑228 (MQ=255) cAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGGGTGGTGTTCCCG‑CCGGTGCTGGTGCGGCTGCTCGACCGGCTGGAAAGGGAAAC‑C‑CCGGCCGGCCGGGGGGGTGAGGAAAgcc > 1:382664/1‑227 (MQ=11) cAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCCTCAGCAGTCCGGCGGCGAAAACGGTGGCCGTGCGGGGTTCCCG‑CCGGTGCTGGGGCAGATACGTGACCCGCTCGCAAGGGAACC‑C‑CTGGGTGACCGGGGGGGTGGGGaaaagc > 1:377321/1‑224 (MQ=11) cAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCCCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCG‑CCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGGAAT‑C‑ATGGCTGACCGGGTGAGTGAGGAAAgcc > 2:460698/1‑227 (MQ=21) cAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCAGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGGGTTCCCG‑CCGGTGCTTGTGCAGAGGCTCGACCGGCTGGGAAGGGAAAT‑C‑CAGGCTTACCGGGGGGGGGAGGAAAgccc > 1:267067/1‑227 (MQ=11) aaCCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCG‑CCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAAT‑C‑CTGGCTGACCGGGGGGGTGCGGAAAgccgcc > 2:208097/1‑227 (MQ=21) gCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGGGTGGTGTTCCCG‑CCGGGGCTGGTGCAGATGCTCCACCGGCTGGAAAGGGGAAG‑C‑CTGGCTGCCCGGGTGGGGGAGGAAACCCCCGcctggc > 1:366746/1‑228 (MQ=11) tttATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCG‑CCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAAT‑C‑CTGGCTGACCGGGAGAGTGAGGAAAGCCGCCGCTTGCTGGCATCGTGCg > 2:399394/1‑228 (MQ=21) ccGGGGAGCTTCACGCCACTCCTCAGAGTTGAAACCGCTACCGGTGGGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAGGACGGTGGCAGTGTGGGGTTCCCG‑CCGGTGCTGGTGCAGAGGCTCGTCCGGGTGGGGAGTGAACT‑C‑AGGGCTGACCGGGGGGTGGAGGAAAGCCGCACCTGGCGGTCACCGGGCGGcccggcc > 1:515278/1‑223 (MQ=11) ctcccggcacccatagggagGTGAACCCGCCACGGGGGGGCGGGCAAAAACCGGGCTCCGCTGCTGGGCGGAGGCGCTCCTGCTGCGCGGGGGCGAGGAGGGGGGCGGTGGGGGGTGCCCG‑CCGGTGCTGGTGGAGAGGCTCGACCGGCTGGAAAGTGAAAT‑C‑CTGGCTGACCGGGTGAGTGAGAAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGc < 1:386665/210‑1 (MQ=2) cTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGCTGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCG‑CCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAAT‑C‑CTGGCTGACCGGGTGGGTGAGGAAAGCCGCCCCTGGCTGGCATCGTGCGGCCTGACCGGGGAGCAGATGCAAAAc > 2:454809/1‑228 (MQ=255) cTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCG‑CCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGGGAAAT‑C‑CTGGCTGACCGGGGGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGCGCAGATGCAAAAc > 2:113341/1‑228 (MQ=25) atcaGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCCGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGCGTTCCCG‑TCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAACT‑C‑CTGTCTGACCGGGTGGGTGGGGCAAACCGCCGCAGGGCGGCATCGCGCCGACCGACCCGGGAGCAGATCCAACACCaa > 1:564144/1‑227 (MQ=11) agTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGGGTTCCCG‑CCGGTGCTGGGGCAGATGCTCGACCGGCTGGAAAGGGAAAT‑C‑CTGGCTGACCGGGTGGTGGAGGAAAGCCGCCGCTGGCGGGCATGCGGCGGCCTGAACgggggaccaaggcaaaacaaaaagg > 1:164947/1‑206 (MQ=11) ttGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCG‑CCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAAT‑C‑CTTGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCGGACCGTGGAGAAAAGGAAAAACCAAAAGGAc > 1:187281/1‑227 (MQ=11) ttGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCG‑CCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAAT‑C‑CTGGCTGACCGGGTGAGTGAGGGAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGAc > 2:142871/1‑227 (MQ=18) ttGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCG‑CCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAAT‑C‑CTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGAGGAGCAGCTGCAAAACCCGATgggc > 2:395890/1‑225 (MQ=18) ttGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCG‑CCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAAT‑C‑CTGGCTGACCGGGGGAGTGAGGAAAGCCGCCGCTGGCTGGCATCTGGCGGCCTGACCGGGGGGCAGATGAAAAACAAAAGGGAcc > 1:596205/1‑228 (MQ=11) ttGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCG‑CCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAAT‑C‑CGGGCTGACCGGGGGAGTGAGGAAAGCCGCCGCTGGCTGGCCTCGGGCGGCCTGCCCGTGGGGCAGATGCAAAACCAAATgggc > 2:380737/1‑225 (MQ=11) ttGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCG‑CCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGGGAAAT‑C‑CTGGCTGACCGGGTGAGGGAGGAAAGCCGCCGCCGGCTGGCCTCGTGCGGCCCGCACGCGAGGCAGATGCCAAACCAAAGGGaac > 1:566677/1‑226 (MQ=11) aaaCCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCG‑CCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAAT‑C‑CTGGCTGACCGGGCGAGTGAGGGAAGCCGCCGCTGGCTGGCATCGTGCGTCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCgc > 2:594268/1‑227 (MQ=17) cTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCG‑CCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAAT‑C‑CTGGCTGACCGGGGGAGGGAGGAAAGCCGCCGCTGGCTGGCATCTGGCGGCCTGACCGGGGCGCAGATGCCAAACCCAATGGGCCCGGGGCGCACGCGGgcg > 1:106434/1‑225 (MQ=11) gCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGCGGCAGTGTGGTGTTCCCG‑CCGGTGCTGGTGCAGAGGCTCGACCGGCTGGCAAGTGAAAT‑C‑CTGGCTGACCCGGCGAGGGAGGGAAGCCGCCGCTGGCCGGCATAGCGCGGCCTGACCGTGGCGCAGATGCAAGACCCGCTGGACCCGCGGTACACGCCGCCGCGaaa > 1:54504/1‑227 (MQ=11) aGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCG‑CCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAAT‑C‑CTGGCTGACCGGGTGAGGGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGGGAAAAATCCACCTg > 2:614281/1‑227 (MQ=14) ggggCGGATGCGCCTCAGCGGGCCGGGGGGAAAGGCGGGGGGTGTTGGGTCTTCCCG‑CCGGTGCTGGTGCGGATGCTCGACCGGCTGGAAAGTGAAAT‑C‑CTGGCTGACCGGGGGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGa < 2:106434/225‑1 (MQ=11) tCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCG‑CCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAAT‑C‑CTGGCTGACCGGGGGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCCAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCCCTGGcc > 2:166791/1‑228 (MQ=11) aggagggTGGCGTTGTGGTGTTCCGG‑CCGGTGCTGGTGCAGATGCCCGCCCGGCTGGAAAGTGAAAT‑C‑CTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGc < 2:187281/222‑1 (MQ=255) cgcggtggttgttgtttgtgCCCG‑CTGGTGTGGGTGAAGGTGCGCGGCCGGCTGGAAAGTGAAAT‑C‑CTGGCTGACCGGGGGAGTGAGAAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAACCCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCTCCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCaag < 1:395890/212‑1 (MQ=11) cGGTGGTAGTTGGGTTTCCCCG‑CCGGTGCTGGTGCAGATGCTCGCCCGGCTGGAAAGTGAAAT‑C‑CTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCaagga < 2:5195/228‑1 (MQ=255) ggcggggtggtgTCCCCG‑CCGGTGCTGTGGCAGAGGCTCGACCGGCTGGAAAGGAAAAT‑C‑CTGGCTGACCGGGTAAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCaaggaagg < 2:120227/221‑1 (MQ=11) ggtgttgggtgTTCCCC‑GCGGTGGTGGTGAAGGTGCTGGACGGGGTGAAAAG‑GAAAC‑CTCTGGCTGACCGGGTGGTGGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGa < 1:544000/221‑1 (MQ=11) gtgtgggtggtccccG‑CCGGTGCTGGTGCAGATGCTCGCCCGGTTGGAAAGTGAAAT‑C‑CTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCGGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGa < 2:164947/215‑1 (MQ=255) gggttgggtcTTCCCG‑CCGGTGCTGGTGCAGATGCTGGACCGGCTGGAAAGTGAAAT‑C‑CTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGa < 2:382664/221‑1 (MQ=19) gagtgggttttccccG‑TCGGTTGTGGGGCAGAGGCTCGCCCGGCTGGAAAGGGAAAT‑C‑CTGGTTCACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGa < 2:377321/215‑1 (MQ=11) acggggggtgTTCCCGCCCGGTGTGGGTGAAGATGCCGAACCGGCGGAAAAGGAAACT‑C‑CGGGCGGACCGGGGGAGGGAGGAAAGCCGCCGCTGGCGGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGa < 1:423211/222‑1 (MQ=11) ccg‑ccgGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAAT‑C‑CTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAACACCAGATGGACCCGGTGTACACGCCGGCGCGAACAATCCACCTGTACCACTGCGCCCATCGCAGCCTGCCGCCGGCCCTTATCAGCAAGGAAGGGACAACAAAATgtgcg > 1:76992/1‑224 (MQ=255) g‑ccgGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAAT‑C‑CTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCCCTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATggcggt > 2:423211/1‑223 (MQ=37) cgtcgtggggggTGCAGAGGCAGGACGGGCTGG‑AAGTGGAATCC‑CGGGGTGTCCGGGTGAGGGAAGAAGGCAGCCGCTGTCGGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCAGCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGTgcg < 1:951/218‑1 (MQ=11) ggcgggttggggtggatggccggACCGGTTGGAATGGGAAAT‑C‑AGGGCTGGCCGGGGGTGTTGGGAACGCCGCCGCGGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCTTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGTgcg < 1:619418/205‑1 (MQ=11) gTGCTGGTGCAGACGCTCGACCGGCTGGAAAGTGAACT‑C‑CTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGTGCGCAGa < 2:10243/227‑1 (MQ=37) tGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAAT‑C‑CTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGCAAGGCACACAAGAATGGTGCGCGGaag > 2:271816/1‑227 (MQ=255) tggtccagggggtCGACGGGCGGGAAAGGGAAAT‑C‑CTGGCGGACCGGGTAGGGGAGGAAAGCCGCCGCTGGCTGGCATCGGGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGTGCGCAGAATACg < 2:265740/216‑1 (MQ=11) gATGCTCGACCGGCTGGAAAGTGAAAT‑C‑CTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGCGCAGATGCAAAACCAACTGGACCCGGCGTACACGCCGCCGCGGAAAATCCCCCTGTACCACTCGCACCCTCGCGGCCTCCCGCCGGCCCTTACCACCAAGGAAGGGGCAACAGAATGGTggcccaaagaacaagaacg > 1:1968/1‑210 (MQ=11) ggtctctgcccgggtgAAAATGTAATCC‑CTGGCGGCCCGGGGGGGTAGGGAAAGCCGCCCGTGGCTGGCATCGGGCGGCCTGACCGTGGGGCCGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCCCTGCGACTATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGTGCGCAGAATACGATGAATg < 1:271816/213‑1 (MQ=11) gcgggAAAGTGAAAC‑C‑CGGCCGGACGGGGGGGGGGAGGAAAGCCGCCGCTGGCTGGCGTCGTGCGGCCTGACCGTGGAGAAGATGCAAAACCAGATGGACCCGTTGTACACGCCGGCGCGAAAAAGCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGTGCGCAGAATACGATGAATGGGGCAACctgc < 1:113341/224‑1 (MQ=11) tGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGCCACCAGAATGGTGCGCAGAATACGATGAAAGGGGCAACCTGCTGACAGAAGGAAACCCg > 2:332660/1‑227 (MQ=255) gCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAACCCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGTGGGCGGAATACGATGAATGGGGCAACCTGCGGAATGAAAAAAAACCGCaa > 1:274762/1‑227 (MQ=255) gCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGGGTACACGCCGCCGCGAAAAATCCACCTGTACCAATGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCCAGGAAGGGGAAACAGAATGGGGCCCAGAATACGATGAATGGGGCAACCTGCGGCATGCAGAAAACCCggcc > 1:410013/1‑225 (MQ=11) gACCGGGTGAGTGAGGAAAGCCGCCGCTGACTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCCCGAAAAATCCACCTGTACCACTGCGCCCATCGAGCCCCGCCGCTGGCCCTTATCAGCAAAGACGGGACACAAGAATGGCTCGCAGGATAACGTGACTGGGACAACCCGCCGCACGCAGAGAAACCGCAtaac > 1:541342/1‑225 (MQ=11) aCCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGACAAATCCACCTGTACCACTGCGCCCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGTGCGCAGAATACGATGAATGGGGCAACCTGCTGAAGGACGAAAAaccaaaacaac > 1:85378/1‑220 (MQ=11) | AACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCG‑CCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAAT‑C‑CTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGC > NC_000913/3765296‑3765734 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |