| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,984,496 | A→C | 18.4% | V504G (GTG→GGG) | aslA ← | putative Ser‑type periplasmic non‑aryl sulfatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,984,496 | 0 | A | C | 18.4% | 133.1 / 4.1 | 62 | V504G (GTG→GGG) | aslA | putative Ser‑type periplasmic non‑aryl sulfatase |
| Reads supporting (aligned to +/- strand): ref base A (33/15); new base C (4/10); total (37/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.20e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGC‑AGATCTCAGC‑GATAGCGCCGGCTTAGTCAGATTTAATC‑TGCGCGCGTGGTGG‑ATATTTTTTCAGGATCTCCA‑TATACGCGTGCATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAGGTGGTTTT > NC_000913/3984281‑3984719 | gttttggtggggtgggaaaGGTGCGTCCGCATGGCATCCGGCAAGGGC‑AGTTCCCAGT‑GATGGCTCCGGTTGAGTCAGTTTAAATC‑TGGGGGGGTGGTGG‑ATATTTTTCCAGGATCGCCA‑TATCCGCGTGCATTTCGGTCTG‑T‑AGCGGTACCCCCATCGGAATAGGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCccg < 1:434809/211‑1 (MQ=255) ttCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGC‑AGATCTCAGC‑GATAGCGCCGGCTTAGTCAGATTTAATC‑TGCGCGCGTGGTGG‑ATATTTTTTCAGGATCTCCA‑TATACGCGTGCATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCccg > 2:588138/1‑226 (MQ=255) ttCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGC‑AGATCTCAGC‑GATAGCGCCGGCTTAGTCAGATTTAATC‑TGCGCGCGTGGGGG‑ATATTTTTTCAGGATCTCCA‑TATACGCGTGCATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATcccc > 2:370066/1‑225 (MQ=255) ttCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGC‑AGATCTCAGC‑GATAGCGCCGGCTTAGTCAGATTTAATC‑TGCGCGCGTGGCGG‑ATATTTTTTCAGGATCTCCA‑TATACGCGTGCATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGCGTCGCTTTCCTGCGGACCGGTGTAGAGGTTAAACACCGACGAACccgcc > 1:313587/1‑228 (MQ=255) tagcgtggaaaaggagggcaaGCATCGCAT‑CGGGAAAGGCGAGTGCCGAGC‑GATTGCGCCGGGTTAGTAAAATTTATTC‑GGCGCGCGGGGGGG‑TTATTTTTTCAGTACCCCCA‑TATCCGCGGGCATTTCGGTCTG‑T‑AGCGGTACCCCCACCGGAATAGGGGGCACGCCGATGGAGTCGCTTTCCTGAGGATCGGTGTAGAGGTTAAACACCGACGATACCGCCGTTTg < 1:370066/208‑1 (MQ=255) tGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGC‑AGATCTCAGC‑GATAGCGCCGGCTTAGTCAGATTTAATC‑TGCGCGCGTGGTGG‑ATATTTTTTCAGGATCTCCA‑TATACGCGTGCATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGCCGCACGCCGAGGGAGTGGCTTTCCTGCGGCTCGGGGTAAAGGTGAAAACCCGACGAGCCCGCCGtttacctac > 1:225682/1‑222 (MQ=255) tGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGC‑AGATCTCAGC‑GATAGCGCCGGCTTAGTCAGATTTAATC‑TGCGCGCGTGGTGG‑ATATTTTCTCAGGATCTCCA‑TATACGCGTGCATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCCCACGCCGATGGAGTCGCTTTCCTGCGGTACGGCGTCAAGGGTAAAACCCGAGAAGCCCGCCGTTTGCAttc > 1:589503/1‑227 (MQ=255) aTAAGATGCGTCAGCATCGCATCCGGCAAAGGC‑AGATCTCAGC‑GATAGCGCCGGCTTAGTCAGATTTAATC‑TGCGCGCGTGGTGG‑ATATTTTTTCAGGATCTCCA‑TATACGCGTGCATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGGGTAGGGGTTAAAACCCGACGGACCCGCCCTTTTCATAACt > 1:338954/1‑227 (MQ=255) aTAAGATGCGTCAGCATCGCATCCGGCAAAGGC‑AGATCTCAGC‑GATAGCGCCGGCTTAGTCAGATTTAATC‑TGCGCGCGTGGTGG‑ATATTTTTTCAGGATCTCCA‑TATACGCGTGCATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGGGTAGAGGTTAAAACCCGCCGATCCCGCCGTTTGCATTCCtg > 2:316955/1‑228 (MQ=255) aTGCGTCAGCATCGCATCCGGCAAAGGC‑AGATCTCAGC‑GATAGCGCCGGCTTAGTCAGATTTAATC‑TGCGCGCGTGGTGG‑ATATTTTTTCAGGATCTCCA‑TATACGCGTGCATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAAAACCGCCGATCCCGCCGTTTGCATTACTGTGcc > 2:573965/1‑227 (MQ=255) gtaagctccgactcgggaaaaGGA‑AGTTCTCGGG‑GATGGCGCTGGCTTAGCCAGTTTTAATC‑TGGGTGGGTGGTGG‑ATGTTTTTGCAGGATCTCCA‑TATCGGCGTGCATTTCGGTCTT‑G‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACCCCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGa < 1:588138/210‑1 (MQ=255) cgcttcCGGCAAAGGG‑ATCTCGCAGG‑GATGGCGCCGGTTTTTTCAGA‑TTAATCGTGCGCGGGTGGTGG‑ATTTTTTTTCAGCGTCTCAT‑TAGACGGGTGCGTTTAGTGTTG‑A‑GGCGTTACCCCCAGTGGAATAGGGCGCACGCCGAGGGGGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACCCCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCAcc < 1:38036/227‑1 (MQ=255) cactcGGGAAAGGG‑GGATCTCCGGGGATGGCGCCGGTTTGGTCAGTTTTAATC‑TGGGGGGGGGGTGG‑ATATTTTTTCAGGATCCCAA‑AATCCGCGTGCATTTGGGTCTG‑G‑GGCGGTACCCCCATCGGAATATGGCCCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAACCCCCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCAcc < 1:573965/222‑1 (MQ=255) tccggggttggggcCGGTTTGGTCAGATTTAACC‑TGGGGGCGTGGTGG‑TTTTTTTTTAGGGATCCCCA‑TTTCCGGGTGTCTTTGGGT‑TG‑TGAGCGGTACCCCCACGGGAATATGGCGCACGCCGATGGAGTCGCTTTCCGGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGtat < 1:330256/215‑1 (MQ=255) gC‑GATAGCGCCGGCTTAGTCAGATTTAATC‑TGCGCGCGTGGTGG‑ATATTTTTTCAGGATCTCCA‑TATACGCGTGCATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTTCATTACTGTGCCGGTGAATCCACCCGGATATCCCCCCTGGGCAAAAGCg > 1:651733/1‑228 (MQ=255) ttgggtccGGCTTAGTCAGATTTAATC‑TGGCAGCGTGGTGG‑ATATTTTTTCAGGATCCCCA‑TATACGCGTGAATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTa < 2:517224/221‑1 (MQ=255) aGCCCCGGTTTAGTCAGTTTTAATC‑GGCGCGGGTGGTGG‑ATATTTTTTCGGGATCTCCA‑TATACGCGTGCATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAg < 2:338954/227‑1 (MQ=255) gccgcgttttgggcataTTAAATC‑TGCGGGCGTGGTGG‑ATTTTTTTACAGGTTCCCCA‑TATACCGGTGCTTGGTGTTCTG‑G‑AGGGGCACCCCCCTCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTaa < 1:532575/209‑1 (MQ=255) cgcCGGCTTAGTCAGATTTAATC‑TGCGCGCGTGGTGG‑ATATTTTTTCAGGATCTCCA‑TATACGCGTGCATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTTTGCCGGGGAATCCACCCTGATTTCCGCCCTGGGCTTAAGCGTAAGGt > 2:451300/1‑227 (MQ=255) tcgcgtttAGTCAAATTTAATC‑CGCGCGCGTGGTGG‑ATATTTTTTGAGGTTCTCCA‑TATCGGGGTGCATTGCGGTCTT‑T‑AGCGGTCCACCCAGCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTg < 2:188857/222‑1 (MQ=255) gcCGGTTTAGTCAGTTTTATTC‑GGGCGGCTTGGTGG‑ATATTTTTTC‑GGGTCTCCATTGTGCGGGAGCTTTTGGGTCTG‑T‑AGCGGTACACCCATCGGAATGTGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACCCCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTg < 1:354588/228‑1 (MQ=255) taaaggacaaGATTTTATC‑TGGGGGGGGTGTGGAATATTTTTCCAGGTTCCCCA‑TATGCGCGGGCTTTTC‑GTGTGTT‑AGGGTTACCGCCTTGGAAATGTGGCGCACCCCGATGGGGTCGCTTTCCGGCGGATCGGTGTAGAGGTTAAACCCCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCt < 1:116357/219‑1 (MQ=255) aTTTAATC‑TGCGCGCGTGGTGG‑ATATTTTTTCAGGATCTCCA‑TATACGCGTGCATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCCCTGGGGATAAGCGTAAGGTGGCTAAATCAGGACgg > 1:316447/1‑227 (MQ=255) aTC‑TGCGCGCGTGGTGG‑ATATTTTTTCAGGATCTCCA‑TATACGCGTGCATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGGTAATCCACCCTGCTATCCGCTCTGGGAATAAGGGTCAGGTTGCTGAATCAGGCCGTGaac > 2:295345/1‑225 (MQ=255) cgcgcgTGGTGG‑ATATTTTTTCAGGATCTCCA‑TATACGCGTGCATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTCCTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGaa > 2:619751/1‑228 (MQ=255) cgcgcgTGGTGG‑ATATTTTTTCAGGATCTCCA‑TATACGCGTGCATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGc > 2:116357/1‑205 (MQ=255) cgcgcgTGGTGG‑ATATTTTTTCAGGATCTCCA‑TATACGCGTGCATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGAAATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGa > 2:169562/1‑227 (MQ=255) cgcgcgTGGTGG‑ATATTTTTTCAGGATCTCCA‑TATACGCGTGCATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGGGAATCCACCCTGATATCCGCTCTTGGTATAAGCGTAAGGTTGCTGAATACGGACGTGATACTTGaa > 2:247010/1‑228 (MQ=255) cgcgcgTGGTGG‑ATATTTTTTCAGGATCTCCA‑TATACGCGTGCATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGAGTAGAGGGTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGAGAATCCACCCTGATATCCGCTCTGGGTATACGCGTAAGGTTGCTGAATCAGAACGGGCAACTTGa > 2:399315/1‑227 (MQ=255) cgTGGTGG‑ATATTTTTTCAGGATCTCCA‑TATACGCGTGCATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGAATAAGCGTAAGGTTGCTGAATCAGGACGTGATCCTTGAACTct > 2:576399/1‑227 (MQ=255) atTTTTTCAGGATCCCCA‑TATGCGCTTGCATTTCGGTCTG‑T‑AGCGGTACACCCATGGGAATATGGCGCAGGCCGATGGAGTCGCTTTCCGGGGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGc < 2:492098/227‑1 (MQ=255) aggatccccattagccggTGCATTTCGGTCTG‑G‑AGCTGTACCCCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCACCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACagcagc < 2:612982/210‑1 (MQ=255) cccatgtccggggtcATTTCGGTCTG‑T‑ACGGGTCCCCCCAGCGGAATAGGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGGTTAGAGGTTAAACCCCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTa < 2:315041/214‑1 (MQ=255) tataCGCGTGCATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGGATCAGGACGTGATACTTGAACTCATCCAAACGCACCGAAGCGAGTTTCCCGt > 1:511317/1‑228 (MQ=255) cgTGCATTTCGGTCTG‑T‑AGCGGTACACCCCTCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCGGATATCCGCTCTGGGTCTCAGCGGAAGGGTTCTGAATCAGGACATGATACTTGAACTCATACATACGCCACGCGGCAAGGTTACCGGTGAGGa > 1:148073/1‑228 (MQ=255) tgtctctcttggggttgtgggggTACCCCAATGGGAATGTGGGGCACGCCGGTGGGGTCCGTTGCCTGCGGTGCGGGGTAGAGTTTAACCCCCGCCGTTCCCGCCGTTTGCAGTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAgg < 1:545055/207‑1 (MQ=255) tGCATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGaa > 2:20539/1‑169 (MQ=255) tGCATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGCCGTGATACTTGAACTCATCCATACGAACAGCCGCGAGTTTACCGTTGAGGaaa > 1:315041/1‑227 (MQ=255) tGCATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATCAGCACAGCAGCGAGTTTACCGTTGAGGaa > 2:326664/1‑227 (MQ=255) tGCATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAACCGTAAGGTTGCTGAACCAGGACGTGATACTTGAACTCATCCATACGCCAAGCAGGAAGTTTACAGTTGAGGaa > 1:334773/1‑227 (MQ=255) tGCATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCCCTCTGGGTATAAGCGTAAGGTTGCTGAATTAGGACGGGATACTTGAACTCATCCATCCGCACAGCACCGCGTTTACCGTTGAGGag > 1:646201/1‑226 (MQ=255) cATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTATAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGACTCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTACCCGTTGGGGAagta > 2:182698/1‑228 (MQ=255) cggtcgg‑t‑AGCGGTACCCCCATGGGAATATGGCGCACGCCGATGGAGTCGCTTTCCGGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCt < 2:562756/228‑1 (MQ=255) t‑AGGGGTACACCAATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCt < 2:316447/227‑1 (MQ=255) ggtgggttccccctatgggAATGTGGCGCACCCCGATGGGGTCCCTTTCCTGCGGATCGGTGTAGAGGTTAAACCCCGCCGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCt < 1:169562/211‑1 (MQ=255) agggggTCCACCCATCGGAATAGGGCGAACGCCTATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACCCCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCt < 2:252872/223‑1 (MQ=255) aggcgttccccccATCGGAATTTGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCt < 2:334773/217‑1 (MQ=255) gTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGt > 2:166274/1‑228 (MQ=255) cgcACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGAAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTccc > 2:2903/1‑228 (MQ=255) aCGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGt > 1:74840/1‑178 (MQ=255) aCGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGt < 2:74840/178‑1 (MQ=255) gTCGCTTTCCCGCGGAGGGGTTTAGGGGTTAACACCCGACGTCCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGt < 1:166274/228‑1 (MQ=255) gCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGc > 2:619878/1‑86 (MQ=255) cTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGct < 1:619878/86‑1 (MQ=255) aTCGGTGTGGGGGTTAACCACCGGCGGTCCCGCCGTTTGCATTACTGTGCCGGTAAATCCCACCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATc < 1:295345/228‑1 (MQ=255) agGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGTCAAAggtg > 1:156481/1‑228 (MQ=255) gTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAggtggc > 2:112881/1‑227 (MQ=255) aaaCACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCCGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGCAGTAGAGCTCGCCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCCTCAAAAAAGGGGGtttt > 1:15246/1‑228 (MQ=255) aaaCACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAGGTGGtttt > 2:44510/1‑228 (MQ=255) aaaCACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAGATGGtttt > 2:248207/1‑228 (MQ=255) aaaCACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGAGGTCTGGTCCAACCCATCGATAAAGTGGGttt > 2:591596/1‑227 (MQ=255) aaaCACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATAAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTTGTGAAGTAGTGATCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGAGTGCTGGTCCACACCATCGATAAAGGTGGtttt > 1:562160/1‑228 (MQ=255) | CGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGC‑AGATCTCAGC‑GATAGCGCCGGCTTAGTCAGATTTAATC‑TGCGCGCGTGGTGG‑ATATTTTTTCAGGATCTCCA‑TATACGCGTGCATTTCGGTCTG‑T‑AGCGGTACACCCATCGGAATATGGCGCACGCCGATGGAGTCGCTTTCCTGCGGATCGGTGTAGAGGTTAAACACCGACGATCCCGCCGTTTGCATTACTGTGCCGGTGAATCCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAGGTGGTTTT > NC_000913/3984281‑3984719 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |