| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,489,889 | A→C | 15.9% | V59G (GTG→GGG) | yjgR ← | DUF853 family protein with NTPase fold |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,489,889 | 0 | A | C | 15.9% | 163.7 / 3.6 | 79 | V59G (GTG→GGG) | yjgR | DUF853 family protein with NTPase fold |
| Reads supporting (aligned to +/- strand): ref base A (30/34); new base C (2/12); total (32/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.47e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01 | |||||||||||
AGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCG‑CACCGG‑ATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAA > NC_000913/4489664‑4490112 | aGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCG‑CACCGG‑ATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGACTGCCCGACGCCGGTCAGGTCGCCTTTcacc > 1:505745/1‑227 (MQ=255) cACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCG‑CACCGG‑ATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGCTATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCCCGACGCCGGTCAGCTCGCCTTTCACAt > 2:643902/1‑227 (MQ=255) cACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCG‑CACCGG‑ATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTCCCAGTCATTTACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCCAACCCGTTCCTGCCTGCGCGACCCCGGTCAGATAGCCTTTcacaa > 1:40789/1‑226 (MQ=255) cACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCG‑CACCGG‑ATGGCCTTTCTCGCCAAAGATATACCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATCTTTTTAAGCCTTGCGAGCAGTTTTTCCGAAACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTaacct > 2:657739/1‑225 (MQ=255) cccccatgttGCACACCTTTGGGCTTCAACAGGCGTGCCAGCAACAGCGGCCCCAGGTCCGAAACCGGCGCCCG‑CACCGG‑ATGGCCTTTCCCGCCAAAGATATCCCCCACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACAt < 1:93212/218‑1 (MQ=255) cacccAGATTGCCCTTCGTTGAGATTCCACAGTCGAGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCG‑CACCGG‑ATGGCCTTCCTCGCCAAAGATACCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACAt < 1:106170/223‑1 (MQ=255) aCGCCAGATTGCCCATCGTTGAGGTTCCACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCG‑CACCGG‑ATGGCCTTTCTCGCCAAAGATATCCCACACCACCTCCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACAt < 2:186117/226‑1 (MQ=255) gATTGCACATCGTTGAGATTCAACAGGCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCG‑CACCGG‑ATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATa < 2:617861/228‑1 (MQ=255) cGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCG‑CACCGG‑ATGGCCTTTCTCGCCAAAGATATCCCAAACCACCACCGGATTGGCATGCGGTTGCCCGGCCTTGACGCCGATATTTTTAAGCCTTGCGCGCAGTTTTTCCGACACCGTTCCTTCCTGCGCGACCCCGGTCAGATCGCCTTTCCGATCAGCCATAAAAAccccca > 1:649398/1‑224 (MQ=255) tgggaTTCAACGGGCGTGCCCGCCACAGCGGCCCCAGGTCCGAACCCGTCGCCCG‑CTCCGG‑TTGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGc < 1:549950/225‑1 (MQ=255) tGAGATTCAACAGTCGGGCCAGCAACAGCGGCCCCAGACCCGAAACCGTCGCCCG‑CACCGG‑ATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGc < 2:545178/228‑1 (MQ=255) agaTTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCG‑CACCGG‑ATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCCTAAACACCGGAACGccc > 2:315337/1‑227 (MQ=255) agaTTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCG‑CACCGG‑ATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCg > 2:470923/1‑228 (MQ=255) cAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCG‑CACCGG‑ATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTTCCCGACGCCGGTCAGATCGCCTTTCCCATCAGCCATAAACACCGGCACGcccaatt > 1:316857/1‑222 (MQ=255) cAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCG‑CACCGG‑ATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGCCCCCGGTCAGCTCGCCTTTCACACAAGCCATAACCACCGGCACGCCGCttt > 2:33910/1‑227 (MQ=255) cAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCG‑CACCGG‑ATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAAACCCGGCACCCCGCttt > 2:630188/1‑227 (MQ=255) aaccggcGTGCCAGCAACAGCGGCCCCAGGTCCGAAACCTTCGCCCG‑CACCGG‑ATGGCCTTTCTCGCCAAAGATATCCCACACCCCCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACGCCGGCACGCCGATTTcc < 2:40789/222‑1 (MQ=255) gcggcgttcgcgaacgCGGCCCCAGACCCGAAACCGTCGCGCG‑CGCCGG‑ATGGCCTTTCTCGACAAAGATATCCCACACCACCAACGGAGTGGCGGGCGGTTGCCAGTCATTGAAGCCGATATGTTTAAGCCGTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCTGGCCGCCGGTCAGATCGCCTTTCCCATCAGCCATAAACACCGGCACGCCGATATCCGACa < 1:612500/213‑1 (MQ=255) gTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCG‑CACCGG‑ATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATg > 2:72672/1‑228 (MQ=255) ccAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCG‑CACCGG‑ATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGAAACCGTTCCTGCCTGCGCGCCGCCGGTCCGATCGCCTTTCACATCAGCCATAAACACCGGCAGCCCGATCTCCGCCCATGACt > 2:4954/1‑228 (MQ=255) ctacgactgggcccAGGCCCTAACCCCTCGCCCC‑GACCGG‑ATGGCCTTTTCCCGCAAAGGTGACGCCAGCCACCACCGTATTGGCATTCGGTTGCCATACATTGACGCCGTTATTTTTAAGCTTTGCGAGCAGTTTTACCGACACCGTCCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAACCACCGGTACGCCGATTTCCGACACTGCCTCCg < 1:336465/217‑1 (MQ=255) gCGGCCCCAGATCCGAAACCGTCGCCCG‑CACCGG‑ATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGtt > 2:341112/1‑228 (MQ=255) cAGATCCGAAACCGTCGCCCG‑CACCGG‑ATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTg < 2:446019/225‑1 (MQ=255) gATCCGAAACCGTCGCCCG‑CACCGG‑ATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACCCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACAGGCACGCCGATTGCCGACCATGCCTCCGCCAGATTTTGCAGc > 2:160640/1‑227 (MQ=255) tCCGAAACCGTC‑CCCC‑CGCCGGTGTGGCCTTTCCCCCCAAAAAACTCCCACCCCACCACCGGATGGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTGCCGACCCCGTTCCTGCCTGCGGGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTa < 1:72672/228‑1 (MQ=255) ccaaaCCGCCGCCCG‑CACCGG‑TGTGCCTTGCGCCCCAAAGATATCCCACCGCCCCACCGGATTGGCGTGCGGTTGCCAGTCATTGACGGCGATATTTTTAAGCCTTTCGAGCAGTTTTTCCGACCCCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTGTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAAc < 1:185926/226‑1 (MQ=255) cGAAACCGTCGCCCG‑CACCGG‑ATGCCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTa < 2:46373/226‑1 (MQ=255) cGAAACCGGCGCCCG‑CCCCGG‑ATGGCCGTTCTCGCCAAAGATGTTCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTa < 2:289480/226‑1 (MQ=255) cctCGCCCGCCACCGG‑GTGGCCTTTGCCGCCAAGGATACCCCACACAGCCCCCGGGTTGCCAGGGGGTTGGCAGTGATTGAGCCCGGTAGTTTTAAGCCTTCCAACCAGTTTGTCCAACACCGGCCCTGCCTGGGGGACGCTGGTCAGATTGCCTTTCTCATCAGCCATAAACCCCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGttt < 1:188926/226‑1 (MQ=255) tcgctcg‑cACGGG‑AAGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGATGCCAGTCATTGACGCCGATAACTCTAAGCATTGCGAGCAGCTTCTCCGACACCGTTCCCCCCGCCGCGACCCCTGTCACATCCCCTTTCACTTCAGCCATAAACCCCGGCCCGACGACTTCCCACAATCACCCCCCCAGGTTTTCCACCGTAACGGCTTTa > 1:42080/1‑227 (MQ=255) gCCCG‑CACCGG‑ATGGCCTTTCTCGCCAAAGATATCCCCCACCACCACCGGCTTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTGCCTGCCTGCGCGCCGCCGGTCAGAGCGCATTTCACCTCAGCCATCAACACCGGCCCCCCGCTTTCCGACAATACACCCCCCAGTTTTTGCCGCGTAACGGTTTTAccc > 1:61032/1‑228 (MQ=255) cTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTAATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGCCAGATCGCCTTTCACATCCGCCATAAACACCGGCACCCCGACTTCCGACAATGACCCCGCCAGTTTTACCACGGTACCGGTTTTACCCCTCCCCGTTggtcccg > 1:137520/1‑222 (MQ=255) ttccccAAAGATCTCCCCACCCACCTCCGTGTTGGCTTGCTGTTGCCAGTCATTGACGCCGATTTTTTTAAGCCTTGCGAGCAGTTTTCCCGACCCCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAACCACCGGCACGCCGATTTCCGCCAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAAt < 1:339373/224‑1 (MQ=255) cgcccaaaaagtatCCCACCCCCCCCACGGGTGTGCAGGCGGTTGCCCGGCAGTGACCGCGAATGTTTTAAGCCTTGCGAGCAGTTTTTCCGCCTCCGTCCCTGCCGGCGCGCCGCCGGTCAGATCTCCGTTCCACTCAGCCATAAGCACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAAt < 1:80217/217‑1 (MQ=255) gCCAAAGATATCCCACCCCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCa < 2:496854/227‑1 (MQ=255) atatatCCCACACCGCCGCCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCATTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCAt < 2:649398/226‑1 (MQ=255) aggtatCCCACGCCCCCACCGACTGTGCAGGCGGTTGCGAGTAGTCGCCTCCGACGTTTTTAAGCCTTGCGAGCATGTTTTCCGCCGCCGGTCCGGCCTGCGCGCCGCCGGTCGAATAGCCTTTCCCAACAGCCATAAACACCGGCAGGCCGATTTCCGACAATGACTCCACCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCAt < 1:45755/225‑1 (MQ=255) ccccCACCCCCCCCGGATTGCCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGt < 2:505745/228‑1 (MQ=255) caccaccacCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTcaca > 2:88141/1‑118 (MQ=255) accaccaccGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACAt < 1:88141/118‑1 (MQ=255) accaccaccGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAACCACCGGCACGCCGCTTTCCCACAATGACTCCCCCAGTTTCTCCAGCGTAACGGCTTTACCCGGCCCCGTTGCGCAGGGCATCCCCCCATCAccgacaccc > 1:115759/1‑220 (MQ=255) accaccaccGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAACCACCGGCACGCCGATTTCCGACAATGCCTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCCTCCCCGTTGCGCCGGTAATCAGCCCATTACCGTTAGcc > 1:108586/1‑228 (MQ=255) accaccaccGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATCACGGTTAGcc > 2:62117/1‑228 (MQ=255) accaccaccGGATTGGCATGCGGTTGCCAGTCATTGAAGCCGATA‑TTTTAAGCCTTGCGAGCAGTTTTTCCGCCACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGCCAATGACTCCCCCAGTTTTTGCAGCGTAACGGTTTTACCGGCCCCCG‑TGCGCCGGAAATCACCCCATGAAGGGTAGCCAt > 1:460493/1‑228 (MQ=255) ccaccGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGCTTTCCGACAATGACTCCGCCAGTTTTTGCAGGGTAAGTGGTTTACCCATCCCCGTTGCGCCGGAAACCACCCAATTCAGGTTACCCTTTc > 1:105355/1‑228 (MQ=255) ccaccGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACCCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGCCAATGACTCCGCCCGTTTTTGCAGCGTAACGGTTTTACCCCCCCCCGTTGCCCCGGCACTCAGccccttcagggtagcccttt > 1:410180/1‑211 (MQ=255) caccGTATTGGCATGCGCGTCCCAGTCATTAACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCCGATCGCCTTTCACATCCGCCATAAACACCCTCACCCCGATTTCCGACAATGACTCCGACACTTTTGCCAGCGTAACGGTTTTACCCGTCACCTTTTCCCCGCTAACCACACCTTGACGCTTAGACCTTcc > 1:407455/1‑228 (MQ=255) ccGGATTGGCTGGCGGTTGCCCGTCATTGACCGCCATATTTTTAAGCCTTGCGATCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCCCATCAGCCATAAACACCTGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGGAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCg < 2:581279/228‑1 (MQ=255) ttggcagtgggTTACCGGTCCTTGACGCCGATTTTTTTAAGCCTTGCGAGCAGTTTATCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGt < 2:325505/219‑1 (MQ=255) ttGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAgc > 2:457759/1‑227 (MQ=255) ttGGCATGCGGTGGCCGGGCATTGACGCCGATATTTTTAAGCCTTTGCAGCAGTTTTTCCGACACCGTTCCTGCCTGCGAGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGt < 2:426148/228‑1 (MQ=255) ggCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTaa > 2:492891/1‑228 (MQ=255) ttccgtttGCCCGTCATTGCTGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTCCCTGCCTGCGCGCCGCCGGTCAGATCCCCTTTCCCATCACCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTaaaac < 1:415763/222‑2 (MQ=255) cGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACa > 2:415763/1‑227 (MQ=255) tttccAGTCATTGCCGCCTATATTTTTAAGCCCTGTGAGCAGTTTTTCCGCCACCGTTCCTGCCTGCGCGACCCCGGTCAGATCGCCTTTCACATCCGCCATAAACCCCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTc < 2:315683/225‑1 (MQ=255) tgcacgtattgcaccccGATTTTTTCAAGCCTGGGGAGCTGTTTCTCCGACCCCGTCCCTGCCTGCGCGACGCCGGTCAGGCCGCCTTTCCCATCAGCCATAAACACCGGCACGCCCATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTc < 1:657739/212‑1 (MQ=255) gCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCtg > 2:592886/1‑228 (MQ=255) tcatctgcccacgttttttttAGACTTTGGGGGCAGGTTTTCCTGTCCCTTTCCTTCCTCGGGGCCGCCGGTCGCATCGCCTTTCCCATCAGCCATAAACACCGGCCCGCCAATTGCCGACAATGACGCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTc < 1:437537/212‑1 (MQ=255) gTCATTGCCCCCGATTTTTTTAAGCCTGGCGAGAGGTTTTCCCGCCCCCGTCCCTGCCTGCGGGACGCCGGTCAGACCGCCTTTCCCATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTc < 1:470923/228‑1 (MQ=255) ccggATTTTTTTAACCCTGGAGAGCATTTGTGCCCACACGGTTCCTGCCTGCGCGACGCCGGTCAGGTCGCCTTTCACATCAGCCATAAACCCCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTACCGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCAGGACGGTTAGCCATTCCCGGGAGTAAAAACAGTTCTGTGTCCGGCGTGc < 1:371492/224‑1 (MQ=255) cgtttttttaAAGCCTTGCGGCGCGTTTTCCCGACGCCGTTCCTCGCTGGGAGCCGCCGGTCAGTGCGCCTTTCCCATCAGCCAAAAACCCCGGCACGCCGATTGCCGACAATGGCTCCGCCAGTTTGTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCggg < 1:4954/223‑1 (MQ=255) cGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCACCCCATGTCGGTTAGCCCTTCCCGGCCGTAAAAACAATTCTGTGTCCGGCGTGCggg > 2:257423/1‑228 (MQ=255) atatTTTTAAGCCTTGCGATCAGTTTTTCCGAACCCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACGCCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCgg < 2:367679/225‑1 (MQ=255) gaacccTTGCGCGCAGTCTTCCCGACACCGTTCCCGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGTCAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACa < 2:134421/224‑1 (MQ=255) cagccttgccgtgcgTTTTGCCGACCCCCTTCAGGCCTCGGGGGTGCCGGACCGATCGGTTTTCACATCGGCCATAAACACCGGCACGCTGATGTCCGGAACTGACTCCGCCAGGTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAg < 1:160640/214‑1 (MQ=255) cTTGCAAGCCTTTTTTCCGACACCGTTCCTGCCGGCGCCACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGt < 1:315337/228‑1 (MQ=255) ttGCGAGCAGTTTTTCCGGCCCCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACCCCGGCACGCCGATTCCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGtt < 2:215574/228‑1 (MQ=255) tgtcGAGCAGTTTTTCCGACACCGTACCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGtt < 2:2412/225‑1 (MQ=255) gtccgggCAGTTTTTCCGAAACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGtt < 2:234138/222‑1 (MQ=255) ctGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAACCCCCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGtt < 2:620317/227‑1 (MQ=255) tGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTTTGTCCGGCGTTCGGGCAATTAACAGGGGtta > 2:140073/1‑227 (MQ=255) gtgAGCAGTTTTCCCGACCCTGTGCCCGCCTGCGGGCCCCCGGTCAGTTCCCCTTCCACATCGGCCATAAACACCGTCACGCCGATTTCCGACAATGACTCCGCCAGTTTGTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCa < 1:33910/226‑1 (MQ=255) gggagcgttttttCCGACCCCGTTCCTGCCTGCGCGCCGCCGGTCAGATCGCCTTTCACATCAGCCAGAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCa < 1:643902/220‑1 (MQ=255) tttttCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGCCAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTTAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATgag > 2:280565/1‑228 (MQ=255) tcccgcccggccgACGCCGGTCAGATCGCCTTACCAATCAGCCATAAACGCCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTc < 2:221188/217‑1 (MQ=255) tCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGt < 2:360793/160‑1 (MQ=255) cgtcggaccGCCGGTCGAAGCGCTATTCCCATCAGCCATAAACACCGGCACTCCGAGTGCCGACAATGGCTCCGCAGGTTTTTGCAGCGTAACGGGTTTACCCGTCCCCGGTGCGCCGGTAATCAGCCCAGGGCGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCTCTCATGAGATATCCTCCAGTTTcctgcct < 1:211296/220‑1 (MQ=255) tgcGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATACTCCAGTTTcctgcctg > 2:101025/1‑228 (MQ=255) cgcgACGCCGGTCAGATCGCCTTTCACATCAGCCATACACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAACCAGTTCTGTGTCCGGCGTGTGGGCATTTAACAGGGGTCGACTCATAGGATACAACCCACGTTCCTGCCAGGa > 1:25313/1‑228 (MQ=255) cgcgACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGGGCGGGCAATTAACAGGGGTTCACTCATTAGATATCCTCCAGTTTCCTGCCTGGa > 2:68209/1‑228 (MQ=255) ggTCAGATCGCTTTTCCCATCAGCCATAAACACCGGCACGCCGAGTGCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGAAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCa < 2:105355/228‑1 (MQ=255) aTCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCTTGCCTGGAGGATAGGCACAGTcc > 2:251725/1‑228 (MQ=255) ttCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTGTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCaaa < 2:137520/227‑1 (MQ=255) | AGCACGCCAGATTGCACATCGTTGAGATTCAACAGTCGTGCCAGCAACAGCGGCCCCAGATCCGAAACCGTCGCCCG‑CACCGG‑ATGGCCTTTCTCGCCAAAGATATCCCACACCACCACCGGATTGGCATGCGGTTGCCAGTCATTGACGCCGATATTTTTAAGCCTTGCGAGCAGTTTTTCCGACACCGTTCCTGCCTGCGCGACGCCGGTCAGATCGCCTTTCACATCAGCCATAAACACCGGCACGCCGATTTCCGACAATGACTCCGCCAGTTTTTGCAGCGTAACGGTTTTACCCGTCCCCGTTGCGCCGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAA > NC_000913/4489664‑4490112 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |