| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1979486 = | 0 (0.000) | 34 (0.450) | 27/426 | NT | 100% | intergenic (‑271/‑267) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | 2101749 = | NA (NA) | intergenic (‑5/+146) | wbbL/insH1 | pseudogene, lipopolysaccharide biosynthesis protein/IS5 transposase and trans‑activator | |||||
Only 100 of 121 total aligned reads displayed.
TCAGTAAGTTGGCAGCATCACCCATAAATGTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTGATTAATTATCTTTACTAATAATCAGACTAATATTTACCTGTTTGACCGAGTTGGGATTGCGTCGTTTCTCCATTAGGAGTAAAGCTTTAATGTCAC > NC_000913/1979249‑1979724 | tgaaaaacgataaccaactggcgatgttattcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgctaattagaaacttccc < 2:443804‑M1/1‑1 (MQ=255)tgaaaaacgataaccaactggcgatgttattcacgctggccaacctgtttcgggcggaacaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc > 2:328809‑M1/239‑239 (MQ=255) aaacgataaccaactggcgatgttattcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagtgatctcactaaaaactggggataacgccttaaatgccgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccccttattcgccccttccccaaa < 2:240201‑M1/5‑5 (MQ=255) aaacgataaccaactggcgatgttattcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatgggctcaaacatgaagaaatgaaatgactgggtcagccgggaagattttccccgcttattcgcaccttccCTAAt < 1:374253‑M1/5‑1 (MQ=255) ctcaattaattaacataaatgtataagTCATTCTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggt < 1:182320‑M1/226‑8 (MQ=255) ctggcgatgttattcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaaagaa > 1:507205‑M1/222‑239 (MQ=255) ttaactttaatgtaaaagTCATACTTTTGTTTTGGGTGTATTTCAATCTGGTAAAAAGTTTTTCGCTAAGATAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTAAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaag < 1:172927‑M1/231‑17 (MQ=255) ttaacataaATTTAAAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaag < 2:57847‑M1/235‑17 (MQ=255) tggcgatgttattcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaaggaataggtcaaccgagaagaatttcccccattattcgcaccttccccaatgcaaagtccccaac < 2:381185‑M1/19‑15 (MQ=255) cgatgttattcacgctggccaacctggttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTa > 1:153291‑M1/218‑220 (MQ=255) acaTAAATGTATAAGTCATTCTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtcc < 1:843272‑M1/238‑20 (MQ=255) aaacaatttttagattcttcttttgttttggggtgatttCAAACTGTTAAAAAGTTTTTCGGTACGCTAGCAAGCAAAAATGAAACAGGAATAAACGAAATGGGATTTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACCTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccc < 2:793690‑M1/220‑21 (MQ=255) ttattcacgctggccaacctgtttcgggcggaccaagtgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGcaacaa > 1:541461‑M1/213‑239 (MQ=255) tattcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAAt > 1:113146‑M1/212‑239 (MQ=255) tattcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAAt > 1:252147‑M1/212‑239 (MQ=255) taAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAACTAATCACTTTAATGCAATACAAGATAAGCTATTTTTAAACAACAACT‑TACAGCACCAAAACATAAggaaggtgcgatcaagtccctactatgcga > 1:138188‑M1/1‑209 (MQ=255) taAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgaga > 1:701471‑M1/1‑209 (MQ=255) taAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaagtgcgaaaaaatccctgaaataaga > 2:653609‑M1/1‑209 (MQ=255) aaGTCATATTTTTGTTTTGGGTTTTTTTCAAACTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagat < 2:391228‑M1/239‑32 (MQ=255) gTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgggatca > 1:360547‑M1/1‑206 (MQ=255) aTACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAACCAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATCCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCCCAACAAACTAAggaaggtgcgaacaagtccctgatatgagatctgtt > 1:793690‑M1/1‑203 (MQ=255) aTAATTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAACTGGGATGTTGCGCACAGTCAAAATACCTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATACAATACCGGATAAGCTATTTTTAAACAGCCAAT‑TACCCCCCCACAAAACACggaagggcacaccaagtccctaacatgaacacaatt > 2:497697‑M1/1‑203 (MQ=255) aCTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgttt > 1:828824‑M1/1‑201 (MQ=255) aCTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgttt > 1:391228‑M1/1‑201 (MQ=255) cctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgttaatg > 1:688050‑M1/196‑239 (MQ=255) ttgttttgGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTACggaaggtgcgaccaagtcccctatatggaacacagtttttc > 2:499954‑M1/1‑197 (MQ=255) ttgGGTGTTTTTAAATCTGTTAAAAAGGTTGTCGCTACGGTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTACTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg < 2:890634‑M1/239‑48 (MQ=255) ttgGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg < 1:386067‑M1/239‑48 (MQ=255) cgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGtt > 2:10317‑M1/189‑239 (MQ=255) ggttgttttTCAATCTGTTAAAAAGTTTTTCCCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCTAAATGGGATTTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGATACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag < 2:360547‑M1/236‑50 (MQ=255) ttaTTTAAAATTGTTAAAAAGTTTTTCGCTACGTTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCCCAGTCAAAATAACGCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcca < 2:701471‑M1/237‑53 (MQ=255) gggccaaaaggttcggcggtgggagaaatctcactaaaaaccggggataacgccttaaatggcgaagaaacggtctaaataggctgatgcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTAc > 2:883124‑M1/184‑238 (MQ=255) tATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgat < 2:251790‑M1/209‑25 (MQ=255) tATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgat > 1:251790‑M1/1‑185 (MQ=255) tCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg > 1:14807‑M1/1‑177 (MQ=255) tGTTAATAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACAGCACACCAAACTATggaaggtgagaacaagtccctgatagacgctcatgtttgtaatccgcacccacagaacagggt > 1:462269‑M1/1‑175 (MQ=255) tGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATAACTTTCATGCAATACCAGATAAGCTATTTTTAATAAAACACT‑TACCGCCCAACAAACTAAggaaggtccgaacaaacccccgatatgagatcaagtttgtcatctggaaccaaaaaaaagggtt > 2:2894‑M1/1‑175 (MQ=255) agtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgt < 2:769791‑M1/39‑1 (MQ=255) agtgggagagatctcactaaaaactggggataacgccgtaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgt > 1:769791‑M1/167‑205 (MQ=255) ttCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat < 2:14807‑M1/239‑78 (MQ=255) atctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaat < 1:233275‑M1/37‑1 (MQ=255) atctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaat > 2:233275‑M1/157‑193 (MQ=255) tctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGgag > 1:500565‑M1/156‑238 (MQ=255) ctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAAt > 2:240698‑M1/155‑182 (MQ=255) ctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAAt < 1:240698‑M1/28‑1 (MQ=255) ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGaa < 1:260802‑M1/46‑1 (MQ=255) ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACat < 2:639183‑M1/57‑1 (MQ=255) ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACat > 1:639183‑M1/140‑196 (MQ=255) aaCAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatt < 1:547905‑M1/239‑104 (MQ=255) aaTGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcctgagtcatcaacttaccttcgccgacagtgaattcagcagaaaggccc > 1:700134‑M1/1‑121 (MQ=255) gATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagccccgtcag > 1:332915‑M1/1‑116 (MQ=255) aataggatgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATAtt > 2:565936‑M1/107‑168 (MQ=255) ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGaa > 1:630776‑M1/101‑146 (MQ=255) ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGaa < 2:630776‑M1/46‑1 (MQ=255) tCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcaaaccaaaaaagagatt > 2:282982‑M1/1‑102 (MQ=255) gattcaaggaatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGTTCACCGGGAGtga > 2:375847‑M1/99‑238 (MQ=255) cAAAATATCTTACCGTTAATAATCATCTGCTCAAAATAATCACTTTCATTCAATACCAGTTAAGCTATTTTTAAACAGACACT‑TGCCGCACAACAAACTAAggaaggttcgaacaagtccctgatatgagatcatgtttgtcagctggagccctagaacagggtgcatcattagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcaggccagaaaagaga < 2:462269‑M1/236‑136 (MQ=255) cAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagaga < 1:653609‑M1/236‑136 (MQ=255) ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAAt < 1:283198‑M1/86‑1 (MQ=255) ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTacac < 2:166315‑M1/94‑1 (MQ=255) ttcaaggcatttacgggagaaaaaagcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAAt > 2:283198‑M1/97‑182 (MQ=255) tCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaccagggttcatcatgattcatcaacttaccttagccgacagtgaattcagcgttaagcgccgttagaccagaaaagagattttcttttcac > 1:891340‑M1/1‑92 (MQ=255) aCCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgc > 1:538540‑M1/1‑90 (MQ=255) ccGTAAATAATCATCTGCTATAAATAATCAATTTCATGAAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAATAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgca < 1:128962‑M1/239‑151 (MQ=255) tcTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagaggttttcttgtcccgcatggagaaggt > 2:571896‑M1/1‑76 (MQ=255) tGCTAAAAATAATCCCTTTCAAGCAATACCAGATAAGCTAATTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgc < 1:499954‑M1/239‑166 (MQ=255) cTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggggcagattctgcca > 1:511649‑M1/1‑72 (MQ=255) cTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagcaagcgacgtaagcccagaaaagagagtttcttgtcccgcatggagcagattctgcca > 1:218362‑M1/1‑72 (MQ=255) taaataaTCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgcc < 1:819175‑M1/235‑167 (MQ=255) taaataaTCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgcc > 2:819175‑M1/1‑69 (MQ=255) acatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGGGATTGATTAattatctttacaaaaaataaaaaaaaaatt < 2:86060‑M1/177‑13 (MQ=255) tCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGGACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatccggagccatagaacagggttcatcatgagtcataaacttaccttccccgacagggacttccgcagtaagcgccgccagacaagacaagagatttgcttgtcccgcttggacccgattctgccctgccaaacca > 1:870315‑M1/1‑62 (MQ=255) tCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTCAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggcgccatagaacagggttcatcatgagtcatcaacttaccttcaccgacagggaattcagcagtaagcgccgtcagaccagaaaagcgatttctttgtcccgcatcggacagattcatccatggccaaaaa > 2:140792‑M1/1‑62 (MQ=255) tCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttttcccgcatggagcagattctgccatggcaaaaca > 1:551064‑M1/1‑62 (MQ=255) tCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccaaaaaagagattttcttgtcccgcatagagaagattctgccaaggaaaaaaa > 2:390306‑M1/1‑62 (MQ=255) tCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcaccgacagtgaattcagcagtaagcgccttcagaccagaaaagcgattttcttgcccaccatggagcaaattcagccaaggcaaaaaa > 2:341530‑M1/1‑62 (MQ=255) cACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagctcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgaatggagcagattctgccatggcaaaacat > 2:886499‑M1/1‑61 (MQ=255) cACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaaagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcggattctgccaaggcaaaacat > 2:622816‑M1/1‑61 (MQ=255) ttCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcttctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttttcccgcatggagcagattctgccatggcaaaaaatgggg > 2:482106‑M1/1‑57 (MQ=255) tCATGCAATACCAGATAAGGTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt < 1:573760‑M1/198‑143 (MQ=255) tCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagctcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt > 2:573760‑M1/1‑56 (MQ=255) tACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacc > 2:557316‑M1/1‑48 (MQ=255) tACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacc < 1:557316‑M1/173‑126 (MQ=255) tACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggaccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagggaattcagcagtaagcgccgtcagaccagaaaagagcttttcttgtcccgcatggagcagattctgcaatggcaaaaaatgtgggaagtcatca > 2:279267‑M1/1‑48 (MQ=255) cccattaagctTTTTTTAAACA‑ACACTCTACCGCACAACAAACGAAggaaggtgcgaacaagtccctgatatgaaatcatgttttgcaactggagccatagaacagggttcatcaggagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcga < 2:700134‑M1/234‑194 (MQ=255) gCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttttcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagagccgtcagaccagaaaagagattttcttgtccaccatggagccgattctgccatggcaaaacatggtggaagtcatcgagccggttt > 1:374543‑M1/1‑38 (MQ=255) gCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgccagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgatccgttt > 1:703034‑M1/1‑38 (MQ=255) gCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagcttctgccatggcaaaacatggtggaagacaccaaaccgattt > 2:289923‑M1/1‑38 (MQ=255) ttttAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttacccc > 2:218732‑M1/1‑33 (MQ=255) ttttAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttggcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttacccc < 1:571896‑M1/239‑207 (MQ=255) tttAAACAGACACT‑TACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtg > 1:763129‑M1/1‑32 (MQ=255) aaCAGACACT‑TACAGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacccgcaaagagattttcttgtcccgcatggagcagattcggccctggcaaaacatggtggaagtcaccgagccgatttaccccaag > 1:811262‑M1/1‑28 (MQ=255) cacaacctttcccgccaaacaaacaaagggaggtgcgaacaattcccgtatatgatatcatgtttggcatctggggccatagaacagggttcatcatgagtcaacaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaagg < 2:180876‑M1/220‑211 (MQ=255) aCCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatcgaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagccccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgtcttaccccaaggctggtaacgacg > 1:346286‑M1/1‑17 (MQ=255) aCCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgc > 1:436186‑M1/1‑17 (MQ=255) cacaACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggc > 1:39808‑M1/1‑13 (MQ=255) caacaaACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcaccgagccgttttaccccaaggctggaaatggcctgtc > 1:180876‑M1/1‑11 (MQ=255) aaCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttat < 2:538540‑M1/239‑234 (MQ=255) tctAAggaaggtgcgaacaagtccctgatatgagattttgtttgctctctggagccataaaacagggttcatcatgggtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttat < 2:705259‑M1/237‑234 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttacccaaaggctggaaaaggccggggaccttatcg > 2:448272‑M1/1‑4 (MQ=255) | TCAGTAAGTTGGCAGCATCACCCATAAATGTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACT‑TACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTGATTAATTATCTTTACTAATAATCAGACTAATATTTACCTGTTTGACCGAGTTGGGATTGCGTCGTTTCTCCATTAGGAGTAAAGCTTTAATGTCAC > NC_000913/1979249‑1979724 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |