| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,442,011 | A→C | 17.0% | V56G (GTG→GGG) | msrA ← | methionine sulfoxide reductase A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,442,011 | 0 | A | C | 17.0% | 103.2 / 2.0 | 58 | V56G (GTG→GGG) | msrA | methionine sulfoxide reductase A |
| Reads supporting (aligned to +/- strand): ref base A (8/36); new base C (11/2); total (19/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.25e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGT‑AGCAACTGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACC‑GCTTCGGCATGACCCGTATCACCGGA‑GCACA‑CTTCCCGATAAGTCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGAC‑CGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGT‑CCAGGCAGGGCATCGGCGGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAA > NC_000913/4441773‑4442246 | tttcTGGGTGCCGTGGTCATTCCCGTGACCAATTCCCGGGGGGGGAGCGGGATTCTCCAAAAATCCCTGT‑AGCAACTGCTCAGAGCGGAAGACGGAAGGATCGTAAACAATGCGTACC‑GCTTCGGCAGGCCCCGTATCCCCGGA‑GCGCC‑CTTCCCGATAAGTCGGATTGGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCTCca < 2:545274/236‑1 (MQ=255)ttcgtggggtccggtgtttttccccTGACCATTTCCCTGGGGGGGTCTGTTATCCCCCAAAAATCCCGTT‑AGCAACTGCTAAGAGCGGATGACGGAAGGATCGTAAACAAGGCGTACC‑GCTTCGGCATGACCCGTATCACCGGA‑GCACC‑CTTCCCGATAAGTCGGATTTGGGGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCTCca < 2:278049/217‑1 (MQ=255) ctggcgctcggtgTCTTTCCCCTCACCCTTCCCCTGGGCGGGATCGTGTTTC‑CCCAAAAACCCTGTGAGCAACGCCTCATCGCGGATGACGGAAGGATCGTAAACAATGCTTACC‑GTTTCGGCATGACCCGTCTCCCCGGA‑GCCCC‑CTTCCCGATAAGGCGGATGTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCTCca < 2:814947/224‑1 (MQ=255) cGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGT‑AGCAACTGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACC‑GCTTCGGCATGACCCGTATCACCGGA‑GCACA‑CTTCCCGATAAGTCGGATTTGGCGTCT‑AGCCGCCGGTATAGCCTGCGCCGGTGCTGTTAACGCCGGGTAAATG‑CCTGACCCCACGCTCCCCAaccccgcaa > 1:369456/1‑234 (MQ=255) cGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGT‑AGCAACTGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACC‑GCTTCGGCATGACCCGTATCACCGGA‑GCACA‑CTTCCCGATAAGTCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGGAACTG‑CCACAACAGACGCTCCACACCCCCGaaa > 1:613378/1‑239 (MQ=255) cGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGT‑AGCAACTGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACC‑GCTTCGGCATGACCCGTATCACCGGA‑GCACA‑CTTCCCGATAAGTCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGGGCTGTAAAAGCCGGGGAACTG‑CCAGAACAGACGCCCCACACCCCAaaaa > 1:222344/1‑239 (MQ=255) cGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGT‑AGCAACTGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACC‑GCTTCGGCATGACCCGTATCACCGGA‑GCACA‑CTTCCCGATAAGTCGGATTTGGCGTAT‑AGCCGCCGGGATAGCCTGCGGCGGGGCGGGTAATAGCGGGTCACTT‑CCGGAACAGACGCCCCCCACCCCCGaca > 1:30728/1‑237 (MQ=255) tGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGT‑AGCAACTGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACC‑GCTTCGGCATGACCCGTATCACCGGA‑GCACA‑CTTCCCGATAAGTCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGGAAAAGCCGGGGAAAGG‑CCAGAACAGACGCGCCCACCCCCAGaaaac > 1:814947/1‑237 (MQ=255) ggTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGT‑AGCAACTGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACC‑GCTTCGGCATGACCCGTATCACCGGA‑GCACA‑CTTCCCGATAAGTCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAAACCCGGGTAACTG‑CCAGAACAGACGCTCCCCACCCCAGAaaca > 1:178484/1‑238 (MQ=255) cGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGT‑AGCAACTGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACC‑GCTTCGGCATGACCCGTATCACCGGA‑GCACA‑CTTCCCGATAAGTCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGGAAACGCCGGGGAACTGCCCAGAAAAAACCCCCCA‑ACCCCCGAAACAACCCACCGCcaaaaa > 1:476193/1‑238 (MQ=255) ggCGGGATCGTGATTCTCCCAAAATACCTGT‑AGCAACTGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACC‑GCTTCGGCATGACCCGTATCACCGGA‑GCACA‑CTTCCCGATAAGTCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCCGGTAACTG‑CCCGAACAGACGCCCCCCACCCCCGAAACAACCCATCGCCAAAAAGGaaacacc > 1:185770/1‑233 (MQ=255) gttCGTGATTCCCCCAAAATACCTGT‑AGCAACTGCTCATAGCTGATGCCGGAAGGATCGTAAACAAGGCGTACC‑GCTTCGGCATGACCCGTATCACCGGA‑GCACC‑CTTCCCGATAAGTCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTcc < 1:418955/236‑1 (MQ=255) aTCGTGATTCTCCCAAAATACCTGT‑AGCAACTGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACC‑GCTTCGGCATGACCCGTATCACCGGA‑GCACA‑CTTCCCGATCAGTCGGATTTGGCGTAT‑AGCCGCCGGTCAAGCCTGCGGGGGGGGCGTACACCCCCGGGAACTG‑CCGCGACAAACGCCCCACCCCCCCCACACCAACCACCCCAAAAACAGCaaaccacacaccc > 2:787023/1‑227 (MQ=255) ttttttttCCCCCAAATTTCCTTT‑AACAAGTGCCCTTGGGGGATGACGGAGGGATCGAAACCATTCCGTCCC‑GTTTGGGCTGGACCCGTAGCCCCGGA‑GCCCC‑CTTCCCGATAAGGCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTc < 2:290232/233‑1 (MQ=255) tcggtatcctcCCAAAATCCCTGT‑AGCAACGGCCCAAAGCTGATGACGGAAGGATCGTAAACAATGCGTACC‑GCTTCGGCATGCCCCGTATCCCCGGA‑GCACA‑CTTCCCGATAAGTCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTc < 1:120497/231‑1 (MQ=255) taggtaTTCTCCAAAAATCCCTGT‑AGCAACGGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACC‑GCTTCGGCATGACCCGTATCACCGGA‑GCACA‑CTTCCCGATAAGTCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTc < 1:164765/234‑1 (MQ=255) cGTGTTTCCCCCAAAATCCCTTG‑AGCAACTGCCCATGGCTGATGACGGAAGGATCGTAAACAATGCGTACC‑GCTTCGGCATGACCCGTATCCCCGGA‑GCACA‑CTTCCCGATAAGTCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTc < 1:607535/238‑1 (MQ=255) ggtatttccccAAAATCCCTGT‑AACAACTGCTCATAGCTGATGACGGAAGGATCGAAACCAATGCGTACC‑GCTTCGGCATGACCCGTATCCCCGGA‑GCACC‑CTTCCCGATAAGTCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAg < 1:692174/231‑1 (MQ=255) gTGATTCCCCAAAAATCCCTGT‑AGCAACTCACCAAGGGTGATGACGGAAGGATCGTAAACAATGGGTACC‑GCTTCGGCATGACCCGTATCCCCGGA‑GCACA‑CTTCCCGATAAGGCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAg < 1:9207/239‑1 (MQ=255) tGATTCTCCCAAAATACCTGT‑AGCAACTGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACC‑GCTTCGGCATGACCCGTATCACCGGA‑GCACA‑CTTCCCGATAAGTCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGGGCTGTAAAACCCCGGGAACTG‑CCCGAACAGACACCCCCCCCCCCCCAAAAAACACAACCCcaaaaaaaaaaaacacaatccccacgg > 2:418955/1‑217 (MQ=255) ctcCCAAAATACCTGT‑AGCAACTGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACC‑GCTTCGGCATGACCCGTATCACCGGA‑GCACA‑CTTCCCGATAAGTCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCCGGGAACCT‑CCAGAACAGACGCTCCACACCCCAGAAACAAACCAACCCCAAAATGGCAAACTCCATTCCCTCACGGACaa > 1:772523/1‑238 (MQ=255) ctcCCAAAATACCTGT‑AGCAACTGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACC‑GCTTCGGCATGACCCGTATCACCGGA‑GCACA‑CTTCCCGATAAGTCGGATTTGGCGTAT‑AGCCGCCGGAATAGCCTGCGGCGGTGCTGTGAAAGCCGGGGGAATT‑CCACAAAACAAGCTCCCCAACCCCGCAACAAACCAACCCAAAAAAGGCAAACCCCATTCCCCCAggaaaaa > 2:669367/1‑234 (MQ=255) ccccaaaaaTACTTGT‑GGCAACTGCTCAAAGGTGATGACGGAAGGATCGAAAACAA‑GGGTACCGGCTTCGGCTTGCCCCGTACGACCGGA‑GCACC‑CTTCCCGAAAGGTCGGATTTGGCGTAT‑GGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACAt < 2:277922/234‑1 (MQ=255) t‑AGCAACTGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACC‑GCTTCGGCATGACCCGTATCACCGGA‑GCACA‑CTTCCCGATAAGTCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAAACCCGGGTAACTG‑CCAGACAAGACCCTCCCCACCCCCGCAAAAACCCACCCCAAAAATGGCAAACTCCATTCCCTCCgggaaatatgcacttaggtat > 1:149100/1‑219 (MQ=255) caaaGCTGATGACGGAAGGACCGTAAACAATGCGTCCC‑GCTTCGGCATGACCCGTATCCCCGGA‑GCACA‑CTTCCCGATAAGTCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGAC‑CGTTGACCGCa < 1:873085/236‑1 (MQ=255) gagttggagagggAAGTATCGTAAACAAGGCGTCCC‑GCTTCGGCATGCCCCGTATCACCGGA‑ACACC‑CTCCCCGATAAGTCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTACATTCCGTCAGGTACATTGGTCATTGAGTGAC‑CGTTGACCGCATg < 1:649400/228‑1 (MQ=255) ttgaggaCGGAAGGATCGTAAACAAGGCGTACC‑GCTTCGGCATGCCCCGTATCCCCGGA‑GCACA‑CTTCCCGATAAGTCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAg < 1:741523/201‑1 (MQ=255) tcgaaaaacgggCGTCCC‑GCTTGGGCATGACCCGTATCCCGGGA‑GCACA‑CTTCCCGAAAAGGCGGATGTGGCGTAA‑CGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGAC‑CGTTGACCGCATGCAGCGTGGCTACGGGCa < 2:178484/227‑1 (MQ=255) cAATGCGTACC‑GCTTGGGCATGACCCGTATCCCCGGA‑GCACA‑CTTCCCGATAAGTCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCTCCACAcccc < 1:563270/138‑1 (MQ=255) aatggggtcc‑GCGTCGGCTTGCCCCGTTTCCCGGGAGGCAC‑‑CTGCCCGATAAGTCGGATTGGGCGTAG‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGAC‑CGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGgtgt < 1:449982/231‑1 (MQ=255) ccgccccTTCGGCATCCCCCGTACCCCCGG‑‑GCCCACCTTCCCGATAGGTCGGATTTGGGGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTCCTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGAC‑CGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGt < 2:540303/233‑1 (MQ=255) ttCGGCATGACCCGTATCACCGGA‑GCACA‑CTTCCCGATAAGTCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGGAACTG‑CCAGAACAGACGCTCcaca > 1:786942/1‑121 (MQ=255) tGACCCGTATCACCGGA‑GCACA‑CTTCCCGATAAGTCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTG‑CCCGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGGACATTGGTCATTGGGGGAC‑CGTTTACCGCATGCACCGTGGCTCCGGGCATCGGGGGGTTTCGT‑CCAGGCCGGGccct > 1:540303/1‑236 (MQ=255) ccccGTATCCCGGGA‑GCACA‑CTCCCCGATAGGTAGGATTGGGCGTAA‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGAC‑CGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGT‑CCAGGCAGGGCATcgg < 1:18960/238‑1 (MQ=255) aCCCGTATCACCGGA‑GCACA‑CTTCCCGATAAGTCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCCCCACCCCCCCGAAACAAACCATCGCAAAAAAGGCAATCTCCATTCCCTCAGGGCAATTGGTCCTTGAGGGAC‑CGTTGACCCCCTCCCACGGGGCTACGGGGATCGGGGGGTTACGG‑CCCGGCAGGGAACcgg > 2:753780/1‑239 (MQ=255) cGGA‑GCACA‑CTTCCCGATAAGTCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTG‑CCAGCACAAACGCCCCCCAACCCAATAACCAACCACCGCCAAAATTGCCATATCCACTCCGCGCGGTACCTTGGTCCTTGCGTGAC‑CGTTGACCGCCGCCCACGTGGCTACGGGCCACAGGGTGGTACGTCCcaggcaagccccggggggggggaaa > 2:74529/1‑220 (MQ=255) cGGA‑GCACA‑CTTCCCGATAAGTCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAAATG‑CCAGAACAGACGCCCCCCACCCCCGAAACAACCCCTCGCAAAAAAGGCCATCTCCATTCCCTCAGGGACAATTGGCCTTTAGTGAA‑CGTTGACCCCACTCAGCGGGGCTCCGGGCAACCGGGGGGTTCGG‑CCAGGCGAGGCCACGGCGGGGGgaaaa > 2:843334/1‑237 (MQ=255) tCCCGAAAAGTCGGTTTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGAC‑CGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGT‑CCAGGCAGGGCATCGGCGGGGGAAACCAGATGCttttt < 1:368887/239‑1 (MQ=255) tagttCGGTTTGGGCGTAT‑TGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCTCCAACCCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGAC‑CGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGT‑CCAGGCAGGGCATCGGCGGGGGAAACCAGATGCTTTTTATCaaa < 2:222344/235‑1 (MQ=255) aaGTCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAAATG‑CCCGAAAAGACGCCCCCCACCCCCGGAAAAACCCCTCTCAAAAATGGCCATATCCATTCCGCCACGTACACTGGTCCATG‑GTGGCACATTGACCACATACAGCGTGGCTACGGGCATCGGGGGGTTACGT‑CCCGGCAGGGGCTCCGCgggggggaacacagggctttttttaata > 2:872675/1‑216 (MQ=255) acgcgtaTTTGGC‑TATAAGCCGGCGGTTAAGCCTGGGGCGGTGCTGTAAACGGCGGGTAACTG‑CCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGGAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGAC‑CGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGT‑CCAGGCAGGGCATCGGCGGGGGAAACCAGATGCTTTTTATCAAATa < 1:92413/233‑1 (MQ=255) caGCCGCCTGTATAGCCTGCGGCGGGACTGGAAACGACGGGTAACCG‑CCAGAACAGACCCCTCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGAC‑CGTTTACCGCATTCAGCGTGGCTACTGGCATCGGGGTGTTACGT‑CCAGGCAGGGCATCGGCGGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGct < 1:101353/238‑1 (MQ=255) gccgGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGAC‑CGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGT‑CCAGGCAGGGCATCGGCGGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTccc < 1:330430/239‑1 (MQ=255) gggccggtcttgaacacccGGTTAACTG‑CCAGAACAGACGCGCCACACCCCAAAAACAACCCAACGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGGCATTTAGTGAC‑CGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGT‑CCAGGCAGGGCATCGGCGGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGACGCTCACCCGAAGTACGGTCAtt < 2:30728/222‑1 (MQ=255) gggggctcTGTAAACGCCGGGTAACTG‑CCAGAACAGACGGTCCACACCCCCGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGAC‑CGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGT‑CCAGGCAGGGCATCGGCGGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCAtt < 1:859404/231‑1 (MQ=255) tcgtaaaaCGCCGGGTAACTT‑CAAGAAACGACGCTCCACACCCCAGAAAAAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGAC‑CGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGT‑CCAGGCAGGGCATCGGTGGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGtt < 2:369456/233‑1 (MQ=255) gccgTAAACGCCGGGTAACCG‑CCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGAC‑CGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGT‑CCAGGCAGGGCATCGGCGGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGtt < 1:278054/235‑1 (MQ=255) gCTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCTCCACCCCCCAGAAACTACCCATCGCAAAAATGGCAATCGCCATTCCGTCAGGTACATTGGTCATTGAGTGAC‑CGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGT‑CCAGGCAGGGCATCGGCGGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTa < 1:74529/239‑1 (MQ=255) gCTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGAC‑CGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGT‑CCAGGCAGGGCATCGGCGGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGtt < 1:614974/238‑1 (MQ=255) cTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGAC‑CGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGT‑CCAGGCAGGGCATCGGCGGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTa < 1:753780/238‑1 (MQ=255) cGGGTAACTG‑CCAGAACAGACGTTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGAC‑CGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGt < 1:363772/140‑1 (MQ=255) cGGGTAACTG‑CCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCATCAGGTACATTGGTCATTGAGTGAC‑CGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGt > 2:363772/1‑140 (MQ=255) gggTAAATG‑CCAGAAGAGACGGTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCAGTCCGTCAGGTACATTGGTCATTGAGTGAC‑CGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGT‑CCAGGCAGGGCATCGGCGGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACa < 1:152713/238‑1 (MQ=255) tcccg‑CCAGAACAGCCGCTCCCCCCCCCACAAACAACCCCTCGCAAAAATGGCAATCCCCATTCCGTCAGGTACATTGGTCATTGAGTGAC‑CGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGT‑CCAGGCAGGGCATCGGCGGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAgg < 2:774664/235‑1 (MQ=255) aaCAGGCGCTCAGCACCCCAGAAACAAGCCATCGCAAAAAAGGCCATCCCCAATCCGTCAGGTACATTGGTCCATGAGTGCC‑CGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGT‑CCAGGCAGGGCATCGGCGGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGc < 1:138327/239‑1 (MQ=255) aaCAGCCGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCCCCATTCCGTCAGGTACATTGGTCATTGAGTGAC‑CGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGT‑CCAGGCAGGGCATCGGCGGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGc < 1:843334/239‑1 (MQ=255) aCAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGAC‑CGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGT‑CCAGGCAGGGCATCGGCGGGGGAATCCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTACCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGc < 1:578886/238‑1 (MQ=255) aCAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGAC‑CGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGT‑CCAGGCAGGGCATCGGCGGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGca < 1:147092/239‑1 (MQ=255) aCAGACGCTCCAAACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGAC‑CGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGT‑CCAGGCAGGGCATCGGCGGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTg < 1:49419/237‑1 (MQ=255) ccgccccTCCCCCCCCCAAAAAAACCCCATGCAAAAAATGGCAATCCCCATTCGGGGAGGTCAATTGGTCTTTGAGTGAC‑CGTTGGCCGCATGCAGCGTGGGTACGGGCATCGGGGTGTTACGT‑CCAGGCAGGGCATCGGCGGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGcac < 2:843086/233‑1 (MQ=255) cccTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCCCCATTCCGTCAGGTACATTGGTCATTGAGTTAC‑CGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGT‑CCAGGCAGGGCATCGGCGGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGcac < 1:551157/233‑1 (MQ=255) cccACCCCCCAGAAACAACCCAACGCAAAAATGGCAATCCCCATTCCGGCAGTTACATTGGTCATTGAGTGAC‑CGTTGACCGCAGGCAGCGGGGCTACGGGCATCGGGGTGTTACGT‑CCAGGCAGGGCATCGGCGGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATaa < 1:54887/238‑1 (MQ=255) | ATACTGCGTGCCGTGGTCATTGCCCTGACGCATTCCCTGGGCGGGATCGTGATTCTCCCAAAATACCTGT‑AGCAACTGCTCATAGCTGATGACGGAAGGATCGTAAACAATGCGTACC‑GCTTCGGCATGACCCGTATCACCGGA‑GCACA‑CTTCCCGATAAGTCGGATTTGGCGTAT‑AGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTG‑CCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGAC‑CGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGT‑CCAGGCAGGGCATCGGCGGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAA > NC_000913/4441773‑4442246 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |