| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 647,210 | A→C | 26.7% | G100G (GGT→GGG) | citG ← | 2‑(5''‑triphosphoribosyl)‑3'‑dephosphocoenzyme‑A synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 647,210 | 0 | A | C | 26.7% | 72.1 / 2.1 | 49 | G100G (GGT→GGG) | citG | 2‑(5''‑triphosphoribosyl)‑3'‑dephosphocoenzyme‑A synthase |
| Reads supporting (aligned to +/- strand): ref base A (25/8); new base C (4/11); total (30/19) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.24e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGTAAGGCCAAGCTGTTGGTACAACCGTTGACCTGC‑CGTCAGTTGTGAA‑TTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑G‑CCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATGGCGCGCCAGCCCAGCAGGGCG > NC_000913/646979‑647447 | gggaaGGGCAAGTTGTTGGTACAAACGTTGGCCCGCGCGTAAGGT‑TGAATTTGTTGGAACGCGGTCGGGGGCGGGGCAGGCCCCGGCA‑AAACTT‑GCCCGCGGTAGAACAACCGTTTGTGGGCGTTCCCGTTTGGTTGAGTTGAGGCAAACGGCCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCg < 2:918529/236‑1 (MQ=255) aaGCTGTTGGTACAACCGTTGACCTGC‑CGTCAGTTGTGAA‑TTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑G‑CCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCCCGGAACCTATCACCTTCGCAAGCCATa > 1:526483/1‑238 (MQ=255) gCTGTTGGTACAACCGTTGACCTGC‑CGTCAGTTGTGAA‑TTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑G‑CCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGACGCAAACGGCCAATTGCCGCAC‑ATATCAGCCCTAACGCAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAAAATATCACCTTTGCAAGCCATccc > 1:533492/1‑238 (MQ=255) gCTGTTGGTACAACCGTTGACCTGC‑CGTCAGTTGTGAA‑TTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑G‑CCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATGCTGCCTTTAGGCGTGTTTACGCCCGCAGTGGCGCGGCACATATCCCCTTCGCAAGCCTAACCa > 1:133614/1‑239 (MQ=255) tGGTACAACCGTTGACCTGC‑CGTCAGTTGTGAA‑TTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑G‑CCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGGGTTTACGCCCGCAGAGGCGCGGAACACATAAcccagtcccttataaccatctcc > 1:324221/1‑218 (MQ=255) cGTTGACCTGC‑CGTCAGTTGTGAA‑TTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑G‑CCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACAATACCCCTTCCCAAGCCCTACCAATTGGGCGAAAAcc > 2:546772/1‑239 (MQ=255) tGACCTGC‑CTCGAGTTGTGAA‑TTATGGCTACGCATTTCGGGACCGGACAGGCCAGGGCAGAAACTT‑G‑CCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTg < 1:546772/239‑1 (MQ=255) gC‑CGTCAGTTGTGAA‑TTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑G‑CCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCCCCTTCGCAAGCCATACCAATTTGGCGTAATCCGTGGCGtc > 1:892966/1‑237 (MQ=255) gC‑CGTCAGTTGTGAA‑TTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑G‑CCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGGGGATTa > 1:474356/1‑238 (MQ=255) tgAA‑TTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑G‑CCGCCGTAAAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAA‑CTACCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACCCCCCCCAGGACTGGGAACATATCTCATTCGAAAGCCATACCCATTGGCCAGAAGCCGGGGGGTACCGCCTCCgga > 2:27148/1‑237 (MQ=255) tttgggccggaggtgggaatggttCAGGCAAGGGCA‑AAACTTGG‑CCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCAttt < 1:649173/216‑1 (MQ=255) ttGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑G‑CCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACGCCTTCAGGGTCCAttt > 1:734125/1‑238 (MQ=255) ttGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑G‑CCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGGGGCACGGAACATAACACCTTCGCAAGCCATACCAATTGGGCGGAATCCGGGGAGAACGGCTTCTGGGGCCAttt > 2:462258/1‑238 (MQ=255) gTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑G‑CCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACCTACTCCCTTCGCAAGCCATTCCAATTGGCGGGAATCCGTGGGGAACCGCTCCTGGGGCCATTTCCGc > 2:73918/1‑239 (MQ=255) cAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑G‑CCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGGGCCATTTCCGAACTAc > 1:760077/1‑239 (MQ=255) ttCGCGATCGGTCAGGCCACGGCAGAAACTT‑G‑CCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAg > 1:889146/1‑238 (MQ=255) tcggctggtgggcgtccccGGCAGAAAATT‑GCCCTCCGTAGACAAAACGGTTGTTGGCGTTACCGGTTGGTTGATGTGAAGCAAACGGCCAATTGCCGCAC‑ATAGCAGCCCGAAAGAAAAAATGCTGCCTTTATGCGTGTTTCCGCCCGCAGGGGCGCGGACCATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAg < 2:861922/220‑1 (MQ=255) cgcgTTCGGTCGGGCCCCGGCAAAAACTT‑G‑CCGCCGTAGAACAAACGGTTGTTGGCGTTCCCGGTGGGGTGATGTGAACCAAACGGCCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATGCTGCCTTTAGGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCa < 1:462258/239‑1 (MQ=255) cgcgATCGGTCAGGCCACGGCAGAAACTT‑G‑CCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCCCGGAACATATCACCTTCGCAAGCCATACCAATTGCGCGTAATCCTGGGGGACCCCCTTCTGGTGCCATTTCCGCCCTACAGGc > 2:898482/1‑238 (MQ=255) cGGTCGGGCCACGGAAAAACCTT‑G‑CCGCGGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTCCGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCaaa < 1:77716/238‑1 (MQ=255) ggccgagcccccggaaaaatgtcg‑ccgccTAAAAACAACGGGTTGTTGGTGTTACGGGTTGATTGAGTTGAAGCAAACGGCCAAGTGGCGCCA‑AGAGCAGATCTAAAGAAAAAATGCTGCTTTTACGCGTTTTTACGCCAGCAGGGGCGCGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCaaa < 2:133614/215‑1 (MQ=255) gTCAGGCCACGGCAGAAACTT‑G‑CCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTCCAGGCACCAAATTc > 1:546796/1‑239 (MQ=255) gTCAGGCCACGGCAGAAACTT‑G‑CCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATCCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGGAATCCGGGGAGTACCGCTTCTGGGGCCCTTTCCGCACCCAAGGCCCCAAAtga > 2:561433/1‑237 (MQ=255) gTCAGGCCACGGCAGAAACTT‑G‑CCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAC‑ATAACAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGGTTACGCCCGCAGTGGCGCGGCACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGGGGGGAACCGCTTCCGGGGCCATTTCCGCACTACAGGCACCAAAATc > 2:280322/1‑239 (MQ=255) gTCAGGCCACGGCAGAAACTT‑G‑ACGCCGCAGAACAACCGGTTGTTGGCGCTACCGGTTGGTTGAGTTGAAGCAAACGGCCGATTGCCGCAC‑CTAGCAGCCCTCAAGAAAACATGCTGCTTTTAGTCGAGTGTACGCCCGCAGCGTCCGGGCACATTTTACCTCCGCCAGCCATACCACTTGTGCGTCATTCGCGGGGGACCGCTCCTGGTGCCATTTCCCCCCCCCCGGAACCAAATTc > 2:74692/1‑239 (MQ=255) ggCAGAAACTT‑G‑CCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCCCAGTGGCCCGGAACATATCACCTTCGCCAGCCATACCAATTGGGCGTAATCCGTGGAGAACCCCTTCTGGGGCCATTTCCCACCTACAGGCCCCCAATTCAATGAAAAgg > 2:735430/1‑239 (MQ=255) gacatacttcgcctgtgTAGAAAAAGCGGTTTGTGGTGTTGCCGGGTGTGTGAGTAAAAGAAACCGGCTATTTGCC‑CACAATAGCAGCCTAAAAGAAAAAATGCTGCCTTTAGGCGTGTTTACGCCGGCGTGGGCGCGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACggg < 2:776707/223‑1 (MQ=255) aaaCTT‑G‑CCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGGGTACCGCTTCTGGGGCCATTTCCCCACTACAGGCACAAAATTCAATGAAAAGGGGtg > 2:474404/1‑237 (MQ=255) aCAAACGGTTGTTGGCGTTACGGGTTGGTTGAGTTGAAGAAAACGGCCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGc < 1:474404/237‑1 (MQ=255) aCGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGAAGCCAGCCCTGAATCGCCAgcc > 1:187677/1‑237 (MQ=255) tttttggctgtcccGTTTGGTTGAGGTAAAGAAAACGGCAATTTCGCACAG‑ATGGACGCTCAAAAAAAAAAATGCTGCCTTTATGCGTGTTGACGCCCGCGGTGGCGCGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTg < 2:804755/227‑1 (MQ=255) tttgtgGCGTTACCGTTTTTTTGAGTAGAAGCAAACGGCCAATGCCCCCAA‑ATAGAGGCCAAAAAAAAAAAATGCTGCCTTTAGGCGTGTTTACGCCCGCAGGGGGCGGGAACATTCCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTg < 2:187677/235‑1 (MQ=255) gttgGCGTTACCGGTTGGTTGAGTTGAAGCAAACGACCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGGGTACCGCTTCTGGTGCCATTTCCGCACTACCGGCACCAAATTCAATGAAACGGAGTGACCCGCCCCGAATCGCCacggccccgcg > 2:247082/1‑229 (MQ=255) tgGGGTTACCGGTTGGTTGAGTTGAACCAAACGGCCAATTGCCGCAA‑ATAGCACCCCTAAAGAAAAAATGCTGCCTTTTGGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGt < 1:73918/239‑1 (MQ=255) tACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCCCGCTGCGGTGGaaa > 2:268495/1‑238 (MQ=255) tttgatgtgaacAAACGGGCAATTGGCACACAATAGCAGCCCTAAAAAAAAAATGGTGCTTTTAGGCGTGGTTACCCCCGAGGTGGCGCGGACCATATCCCTTTCCAAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAgcg < 2:526483/228‑1 (MQ=255) agttgaAGCAAACGGCCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTCCGGGGGAAATCTTCCAGCGCCat > 1:850604/1‑239 (MQ=255) caaaTGGCCGCAC‑AAGGCAGCCCAAAAGAAAAAAGGCGGCCTTTAGGGGTGTTTACGCCCGAAGTGGCGCGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCAc < 1:735430/236‑1 (MQ=255) aaTTGCCGCAC‑ATAGCCCCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGc < 1:334644/239‑1 (MQ=255) cac‑aTAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTCCAGGCACCAAATTCCATGAAACGGGGAAGCCGGCCCTGAATCCCCAGCCCGCTCCGGTGGAAATCTTCCAGCGCCCAATCTTTGTTCGCCCCGCAGTTaaat > 2:10241/1‑237 (MQ=255) cctcTAAAGAAAAATTTCTCCTTTTGGTGGTTTTTCCGCCCGTGGGGGCGCGAAACTTACCCCCCTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACg < 2:336413/236‑1 (MQ=255) cccTAAAAAAAAAAGTCTGCCTTTGTCGGGGTTTACGCCCGCAGTGGCGCGGAACTTTTCCCTTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACg < 1:10241/238‑1 (MQ=255) aaGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATAGCTTTGTGCGCACCGCAGTTAATGCGATCCACGAgg > 1:810804/1‑236 (MQ=255) aaaaggtgtccTTTGTGCGTTTTTACGCCCGCAGTGGCGCGGAACATATCCCCGTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGttt < 1:280322/230‑1 (MQ=255) aaaaTGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGtt > 1:535769/1‑238 (MQ=255) tttACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGGGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCCCTCTGCGGTGGAAATCTTCCAGCGCCCTACTTTTGTCCGCCCCCCAGTTAATTGCATCCCGCGGGCCCAGCTTTGGTGACAGATTGCCTtcaa > 2:562250/1‑237 (MQ=255) cAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCTCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGCTTGAATTCAGTCAGCATCgc > 1:201062/1‑238 (MQ=255) aaCATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGTTAGCCAGCCCTGAATCGCCAGCCCGCTGCCGTGGAAATCTTCAAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCCCCAGGCCGGGTTTCGTGGACAAATTAGCTTCAGTCAGCAGGGCCCGccagcccg > 2:357076/1‑237 (MQ=255) cACCTCCGCAGGCCATACCAATGGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATGGCGCGCCAGCCCAGCAGGGCg < 1:898482/239‑1 (MQ=255) | GGTAAGGCCAAGCTGTTGGTACAACCGTTGACCTGC‑CGTCAGTTGTGAA‑TTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTT‑G‑CCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCAC‑ATAGCAGCCCTAAAGAAAAAATGCTGCCTTTATGCGTGTTTACGCCCGCAGTGGCGCGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATGGCGCGCCAGCCCAGCAGGGCG > NC_000913/646979‑647447 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |