| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,335,743 | A→T | 18.2% | intergenic (+285/‑88) | yciX → / → acnA | uncharacterized protein/aconitate hydratase 1, aconitase A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,335,743 | 0 | A | T | 18.2% | 155.3 / 2.1 | 60 | intergenic (+285/‑88) | yciX/acnA | uncharacterized protein/aconitate hydratase 1, aconitase A |
| Reads supporting (aligned to +/- strand): ref base A (17/31); new base T (9/3); total (26/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.14e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAACCGTTAAGGGTGTAGCCTATGA‑TCAACACAAATATGAAATATTGGTCCTGGATGGGCGCGTTTTCTCT‑GTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGTTTTGCTCGAA > NC_000913/1335508‑1335971 | accccGCATCAATAACAGTTTGAGTTTTCTAAACAAAAAATAATAACCGGTAAGGGTGTAGCCTATGA‑TCAACACAAATATGAAATATTGGTCCTGGATGGGCGCGTTTTCTCT‑GTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCa < 2:20505/236‑1 (MQ=255) acCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAACCGTTAAGGGTGTAGCCTATGA‑TCAACACAAATATGAAATATTGGTCCTGGATGGGCGCGTTTTCTCT‑GTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGT‑CATTTGT‑CTTGCCCCAAGGGTTCTCCTCTTTTATCAACTTTGGTTGTTTTCaaa > 1:134078/1‑239 (MQ=255) cGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAACCGTTAAGGGTGTAGCCTATGA‑TCAACACAAATATGAAATATTGGTCCTGGATGGGCGCGTTTTCTCT‑GTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGGTGT‑CATTTGC‑TTTTCCACAAGGTTTTTCCCCTTTTTTCAATTTGGGTTTTTTTCcaa > 1:318829/1‑237 (MQ=255) aaTAACAGCTTGGTTTTACTCAACAAAAAAAAATAACCGTTAAGGGGTTAGCCTATGA‑TCAACACAAATTTGAAATATTGGTCCTGGATGGGCGCGTTTTCTCT‑GTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTTCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTAcg < 1:795926/239‑1 (MQ=255) aacaattttgtttatcccaaacaaaaaTAATAACCGTTAAGGGGTTAGCCTATGA‑TCAACACAAATATGAAATATTGGTCCTGGATGGGCGCGTTTTCTCT‑GTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGa < 2:329471/216‑1 (MQ=255) aCAGCTTGAGTTATCTCAACACAAAATAATAACCGTTAAGGGTGTAGCCTATGA‑TCAACACAAATATGAAATATTGGTCCTGGATGGGCGCGTTTTCTCT‑GTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGGTTT‑CCCTTTG‑TTTTCCACCAAGTTTTTCCCCTTTTTTCAATTTGGGGTGTTTTCAAACCGTTACGCGaa > 1:96189/1‑238 (MQ=255) cgttttatttATCTCAAAAAAAAAAAATAACCGTTAAGGTTGTCGCCTAGGA‑TCAACCAAAAGTTGAAATATTGGTCCTGGATGGGCGCGTTTTCTCT‑GGCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGt < 2:337426/231‑1 (MQ=255) cTTGAGTTATCTCAACACAAAATAATAACCGTTAAGGGTGTAGCCTATGA‑TCAACACAAATATGAAATATTGGTCCTGGATGGGCGCGTTTTCTCT‑GTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCCTTTTAC‑TTTCCCCCAAGGTTTTTCCCTTTTTTTCATTTTGGGTGTTTTTCaaaacttaagggtgtttt > 2:53594/1‑224 (MQ=255) aGTTATCTCAACACAAAATAATAACCGTTAAGGGTGTAGCCTATGA‑TCAACACAAATATGAAATATTGGTCCTGGATGGGCGCGTTTTCTCT‑GTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTgtgt < 1:257950/239‑1 (MQ=255) aGTTATCTCAACACAAAATAATAACCGTTAAGGGTGTAGCCTATGA‑TCAACACAAATATGAAATATTGGTCCTGGATGGGCGCGTTTTCTCT‑GTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGGTGT‑CCTTTGC‑TTTTCCACAAGGGTTCTCCTCTTTTTTCAATTTTGGGTGTTTTCAAAACGCTTAGCGATGTTTgggt > 2:279033/1‑239 (MQ=255) ttattcAACCAAAAATAATATCCTGTAAGGGTGTGGCCTTTGA‑GCAACAAAATTATTAATTAGTGGGCCTGGATGGGCGCGTTTTCTCT‑GTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTAt < 2:880689/235‑1 (MQ=255) taaaCAAAAAATAATCACCTTTAAGGGTTTAGCCTTTGA‑TCAACCCAAATATGAATATTTGGTCCTGGATGGGCGCTTTTTCTCT‑GTCGATGCTCTTCTGGGCCGAACTCCGCTGGATCATTACTCCCTGATCCTTGACCCCGCTGCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCttt < 2:318829/237‑1 (MQ=255) aataatAACCGTTAAGGGTGTAGCCTATGA‑TCAACACAAATATGAAATATTGGTCCTGGATGGGCGCGTTTTCTCT‑GTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGG‑CCATTGC‑TTTGCCACAAGGTTTTTCCTCCTTTTTTCATTTGGGTTGTTTTTAAATTGTTACGGCAGGTTT‑TGTTTTTTTTaaaaaatta > 2:474293/1‑231 (MQ=255) aaaaatccctttAAGGGTTTTGCTTATGACACAACA‑AAATTTGAAATATTGGTCCCGGATGGGCGCGTTTTCTCT‑GTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCAcc < 2:134078/229‑1 (MQ=255) ataaCCGTTAAGGGTTGAGCCTTGTT‑TCAACACAAATATGAAATTTTGGTCCTGGATGGGCGCGTTTTCTCT‑GTCGATGCTCTTCTGGGCCGAACTCCTCTTGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTg < 2:784755/239‑1 (MQ=255) aaGGGTGTAGCCTATGA‑TCAACACAAATATGAAATATTGGTCCTGGATGGGCGCGTTTTCTCT‑GTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGGTGT‑CATTTGC‑TTTTCCCCAAGGTTTTTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGCTGTTTGTGTTATCTTTAATATTTACCCTGAAGACAATc > 1:195766/1‑239 (MQ=255) gtAGCCTATGA‑TCAACACAAATATGAAATATTGGTCCTGGATGGGCGCGTTTTCTCT‑GTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGT‑CCTTTGC‑TTTGCCCCCAGGTTTTTCCTCTTTTATCAATTTTGGTTGTTTTCAAATCGGTACCCGCTGTTTGTGTTATCTTTAAAATTTACCCTTAAGAGAATAAAGGCt > 1:751697/1‑239 (MQ=255) tAGCCTATGA‑TCAACACAAATATGAAATATTGGTCCTGGATGGGCGCGTTTTCTCT‑GTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGT‑CCTTTGC‑TTTTCCCCAAGGTTTCTCCTCTTTTATTAATTTGGGGTGTTATCAAATCGTTACGCGATTTTTTTGTTTTCTTTAATATTCACCCTGAAGAAAATCAggggt > 1:685693/1‑236 (MQ=255) aTGA‑TCAACACAAATATGAAATATTGGTCCTGGATGGGCGCGTTTTCTCT‑GTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGT‑CCTTTTC‑TTTGCCCCAAGGGTTCTCCCCTTTTATCCATTTGGGTGGTTTTCAAATCGTTACCTGGTGTTTGTGTTTTTTTTAATTTTTACCCGTAAGAGAATAAAGGGTTCggca > 2:878830/1‑235 (MQ=255) tgttCAACAAAAATATGAAATATTGGTCCTGGATGGGCGCGTTTTCTCG‑TTCGATGCTCTTCTGGGCCGAACTCCTCTGGAGCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAAcc < 2:533055/236‑1 (MQ=255) ta‑TCAACCCAAATTTGAAATATTGGTCCTGGATGGGCGCGTTTTCTCT‑GGCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAAccc < 1:199051/238‑1 (MQ=255) gA‑TCAACACAAATATGAAATATTGGTCCTGGATGGGCGCGTTTTCTCT‑GTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAAccc < 1:279033/239‑1 (MQ=255) aacaaaaccaAATATGAAATTTTGGTCCTGGGTGGGCGCGTTTTCCCTGGCCAATGC‑CTTCCGGGCCGAACTCCTCTGGATCATTACTCACTTATCCGTGACCCCGCTGCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAAccc < 2:96189/231‑1 (MQ=255) acacAAATATGAAATATTGGTCCTGGATGGGCGCGTTTTCTCT‑GTCGATGCTCTTCTGGGCCGCACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGT‑CATTTGCTTTTCCCACAA‑GTTTCTCCTCTTTTTTTAAATTTGGTTTTTATCAAATCGTTTCGCGATGTTTGTGTTATTATTTATATTCTACCTCAAGAGAATCAGAGCTTCGCAACCCCGt > 1:277628/1‑237 (MQ=255) acacAAATATGAAATATTGGTCCTGGATGGGCGCGTTTTCTCT‑GTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGGTGT‑CATTTGC‑TTTGCCACAAGGGTTCTCCTCTTTTATCAATTTTGGTTGTTTTCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTTACCCTGAATAGAATCAGGGCTTTGCCACCCCGTCa > 1:114849/1‑239 (MQ=255) ccaAATTTGAAATTTTGGTCCTGGATGGGGGCGTTTTCTCT‑GTCGATGCTCTTCTGGGCCGAACTCCCCTGGATCATTACTCCCTGATCCTTGACCCCGCTGCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCAtt < 2:883358/238‑1 (MQ=255) aaTATGAAATTTTGGTCCTGGATGGGCGCGTTTTCTCT‑GGCGATGCGCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAag < 2:195766/239‑1 (MQ=255) atatGAAATATTGGTCCTGGATGGGCGCGTTTTCTCT‑GTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTTTGTTTTTTTTAATATTTACCCTTAAGAGAATCAGGGCTTTCCAACCCTGTCATTAagg > 1:883358/1‑239 (MQ=255) attaaaTGTTGGGCTTGTGTGGGCTCTTTTTCTCT‑GTCGAGCCTCGTCTGGGACGAACTCCTCGGGATCATGACTCACTGATCCTGGCCCCCGCTGCGGCGGGGTTGT‑CATTTGC‑TTTTCCACAAGGTTTCTCCTCTTGTAGCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCGTGTCATTAaggag < 2:277628/236‑1 (MQ=255) tGAAAGTTTGGGCCTGGATGGGCCCGTTTTCTCT‑GTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGAGCCTTGACCCCGATGCGGCGGGGTTGT‑CATTTGC‑TGTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAagga < 2:203754/237‑1 (MQ=255) aaaTATTGGTCCTGGATGGGCGCGTTTTCTCT‑GTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGT‑CATTTTG‑CTTGCCCCAAGGTTTTTCCCCTTTTTTCAATTTGGGTTGTTATCCAATCGTTACGCGATGTTTGTTTTATATTTAATATTCACCCTGAAGAGAATAAGGGCTTCGCCACCCTTTCATTAAtgagga > 1:203754/1‑238 (MQ=255) gATGGGCGCGTTTTCTCT‑GTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAAAGAATCAGGGCTTCGTAACCCTGTACTTAAGGAGGAGCTATGTCGTCAAc > 1:569234/1‑238 (MQ=255) gTTTTCTCT‑GGCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGa < 1:135811/177‑1 (MQ=255) gTTTTCCCT‑GTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGaa < 1:608093/239‑1 (MQ=255) gCCGACCCCCTTTTGTTCCTTACTCCCTGATCCTTGACCCCGCTGGGGGGGGGGTGT‑CATTTGC‑TTTGCCACAAGGTTTCCCCTCTTTTATTAATTTTGGTGTTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGcc < 2:722529/238‑1 (MQ=255) tgcctcGGGATTATTACTCACTGATCCTTGACCCCGCTGGGGCGGGGTTGG‑CATTTGC‑TTGGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTAACAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATa < 1:190545/237‑1 (MQ=255) ttaTTACTCACTGATCCTTGACCCCGCTTGGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTTTCCTCTTTTATCAATTTTGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCa < 2:8698/237‑1 (MQ=255) tCATTACGCACTGATCCTTGACCCCGGTGCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTAcc < 1:187995/238‑1 (MQ=255) tCATTACCCACTGATCCTTGACCCCGGTGCGGCGGGGTTGT‑CATTTGA‑TTTGCCACAAGGTTTCTACTCTTTTATCAATGTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTAcc < 1:801867/238‑1 (MQ=255) ttACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGG‑TCTTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTTGGTTGTTATCAAATTGATACGCGATTTTTGTGTTATCTTTTATATTCACCCTCAAGAGGAACCGGGGTTTGCAACCCTTGCATTAAGGAGAGGCCTTATCGTCAACCCCCAGAGAAGCCAGGAAGGCACCATTGGCGGCCaaaaaaaaaaatatatca > 2:190545/1‑229 (MQ=255) gACCCCGCTGCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCCACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGACTGCCg > 1:23519/1‑236 (MQ=255) ccccGCTGCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTAAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTtgc < 1:474293/239‑1 (MQ=255) ccGCTGCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCAtt < 2:196007/143‑1 (MQ=255) ccGCTGCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAAGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCAACCTGAAGAGAATCAGGGCTTCGCAACCCTGTCAtt > 1:196007/1‑143 (MQ=255) ttttttaaagagtcggtgtaTTTTC‑TTGACCACTAGTTTTTCCCTTTTGTATCAAGTTTGGTTGTTTACAAATCGTGACGCGATCGTTGTGGTATCTTTAATATTCACCCTGAAGAGAAGCAGGCCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAACCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTTCAGCCTGCCGCTtgc < 2:235244/218‑1 (MQ=255) cGCTGCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTTTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGcc < 2:154835/198‑1 (MQ=255) cGCTGCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGcc > 1:154835/1‑198 (MQ=255) cggGGTTTT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCa < 1:878830/238‑1 (MQ=255) gT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTTGGCGa > 1:89891/1‑239 (MQ=255) ttgc‑tttgcCACAAGGTTTTTCCTTTTTTATCAATTTGGGTTGTTTTCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCa < 2:114849/239‑1 (MQ=255) tgcCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCAACCTGACGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGCGGAGCTATGTCGTCACCCCTACGAGAAGCCAGTAAGGAGCCGTTGCAGGCCAACGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCAcctgtctcttctacaaat > 1:235244/1‑221 (MQ=255) agagtcttttttttttCAATTTTGGTTGTTTTCAAATCGTTACGCGATGTTTGTGTTTTCTTTAAAATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGt < 2:413886/229‑1 (MQ=255) tttCTCCTTTTTTATCAATTTGGGTTTTTATCAAATCGTTACGGGATGTTTGTTTTATCTTTAATATTCACCCTGAAGGGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTAGGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGt < 2:751697/238‑1 (MQ=255) tctcCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCa > 1:672250/1‑238 (MQ=255) ttcctcTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACt < 2:672250/238‑1 (MQ=255) ttttATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAagg < 2:426594/101‑1 (MQ=255) ttttATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAagg > 1:426594/1‑101 (MQ=255) tttATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGCTAAAACTTACCACTACTACACCCTGCCGCTTGCGCCTAAATCACTGGACGATCACACCCGCACACCAAAACCACTCAAACtt > 2:284081/1‑239 (MQ=255) tttGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGTTCTgactct > 1:413886/1‑234 (MQ=255) ttGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGTTTTGCTCGaa > 1:27884/1‑239 (MQ=255) | ACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAACCGTTAAGGGTGTAGCCTATGA‑TCAACACAAATATGAAATATTGGTCCTGGATGGGCGCGTTTTCTCT‑GTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGT‑CATTTGC‑TTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGTTTTGCTCGAA > NC_000913/1335508‑1335971 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |