| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,400,026 | C→A | 13.4% | A71S (GCC→TCC) | ogt ← | O‑6‑alkylguanine‑DNA:cysteine‑protein methyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,400,026 | 0 | C | A | 13.4% | 187.7 / 2.0 | 70 | A71S (GCC→TCC) | ogt | O‑6‑alkylguanine‑DNA:cysteine‑protein methyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (36/23); new base A (2/9); total (38/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.79e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCATGGTGCCGTTTCGGCCAATAACCCGATGGCAAGGTACGACGATGCTGATGGGATTCGATCCGTTTGCCGCACCAACGGCACGCGCCGCGCCAGGACGGCCCAATTGCTCAGCCAGTTGGCCGTAAT‑GCATTACCTGCCCGCAGGGGATAGTGCGTAGTGTTTTCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCTCATCGCAAATCACCCACAGTGGACCCAGTGGCGTGGCAATTTTTTCTTCAAGTAATCTCAGCATCCGTTCTCTCTTAAGACAAACGT > NC_000913/1399789‑1400259 | tattGGTGCCGTTTCGGCCAATAACCCGATGGCAAGGGACGACGATGCTGATGGGATTCGATCCGTTTGCCGCACCAACGGCACGCGCCGCGCCAGGACGGCCCAATTGCTCAGCCAGTTGGCCGTAAT‑GCATTACCTGCCCGCAGGGGATAGTGCGTAGTGTTTTCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGc < 1:502968/235‑1 (MQ=255) ccGTTTCGGCCAATAACCCGATGGCAAGGTACGACGATGCTGATGGGATTCGATCCGTTTGCCGCACCAACGGCACGCGCCGCGCCAGGACGGCCCAATTGCTCAGCCAGTTGGCCGTAAT‑GCCTTACCTGCCCGCAGGGGATAGTGCGTAGTGTTTTCCAGCCTT‑CGCGCTGAAATGGCGTCCCCCCCGTTGCAGTGGGAAGCG‑TACACAAAATGCCAAGATTACCGCCAAAAAATTc > 2:79861/1‑239 (MQ=255) cccaTACCCCGGTGGCAAGGTTCGACGATGCGTATGGGATTGAGTCCGTTGCCCGCCGCAACGCCCCGCGCCGGCCCATGACGGACCAATTGCTCAGCCAGTTGGCCGTAAT‑GCATTACCTGCCCGCAGGGGATAGTGCGTAGTGTTTTCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCtt < 2:239623/236‑1 (MQ=255) cccaTACCCCGGTGGCAAGGTACGCCGATGCTGATGGGATTCGATCCGGTTGCCGCACCAACGGCACGCGCCGCGCCAGGACGGCCCAATTGCTCAGCCAGTTGGCCGTAAT‑GCATTACCTGCCCGCAGGGGATAGTGCGTAGTGTTTTCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCtt < 2:517548/236‑1 (MQ=255) aaTAACCCGATGGCAAGGTACGACGATGCTGATGGGATTCGATCCGTTTGCCGCACCAACGGCACGCGCCGCGCCAGGACGGCCCAATTGCTCAGCCAGTTGGCCGTAAT‑GCATTACCTGCCCGCAGGGGATAGTGCGTAGTGTTTTCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGt < 1:716234/239‑1 (MQ=255) tAACCCGATGGCAAGGTACGACGATGCTGATGGGATTCGATCCGTTTGCCGCACCAACGGCACGCGCCGCGCCAGGACGGCCCAATTGCTCAGCCAGTTGGCCGTAAT‑GCATTACCTGCCCGCAGGGGATAGTGCGTAGTGTTTTCCAGCCTT‑CGCGCTGACATGGCGTCCCCCCCGTCGCAGTGGGAAGCG‑TATCAATAATGCTAAGGTTCCCGGCCAAATATTCACCAACATTGTCg > 1:144785/1‑239 (MQ=255) gATGGCAAGGTACGACGATGCTGATGGGATTCGATCCGTTTGCCGCACCAACGGCACGCGCCGCGCCAGGACGGCCCAATTGCTCAGCCAGTTGGCCGTAAT‑GCATTACCTGCCCGCAGGGGATAGGGCGTAGTGTTTTCCAGACTT‑CCCGCTGAAATGGCGTCCCCCCCGTAGCAGGGGGAAGGG‑TATCAATAATGCAAAGATTACCGGAAAAATATTTACGAAGCTTGTCCCTTaaa > 2:11452/1‑239 (MQ=255) ggTACGACGATGCTGATGGGATTCGATCCGTTTGCCGCACCAACGGCACGCGCCGCGCCAGGACGGCCCAATTGCTCAGCCAGTTGGCCGTAAT‑GCATTACCTGCCCGCAGGGGATAGTGCGTAGTGTTTTCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTgg > 1:897295/1‑239 (MQ=255) ggTACGACGATGCTGATGGGATTCGATCCGTTTGCCGCACCAACGGCACGCGCCGCGCCAGGACGGCCCAATTGCTCAGCCAGTTGGCCGTAAT‑GCATTACCTGCCCGCAGGGGATAGTGCGTAGTGTTTTCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑GATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTgg > 1:478367/1‑239 (MQ=255) tGCTGATGGGATTCGATCCGTTTGCCGCACCAACGGCACGCGCCGCGCCAGGACGGCCCAATTGCTCAGCCAGTTGGCCGTAAT‑GCATTACCTGCCCGCCGGGGCTAGTGCGTAGTGTTTTCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAACATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCa > 1:377628/1‑239 (MQ=255) cTGATGGGATTCGATCCGTTTGCCGCACCAACGGCACGCGCCGCGCCAGGACGGCCCAATTGCTCAGCCAGTTGGCCGTAAT‑GCATTACCTGCCCGCAGGGGATAGTGCGTAGTGTTTTCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCCAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGa > 1:379631/1‑239 (MQ=255) aTTCGGTCCGTTTGCCCGACGAACGGCACGCGCCGCGCCAGGACGGCCCAATTGCTCAGCCAGTTGGCCGTAAT‑GCATTACCTGCCCGCAGGGGATAGTGCGTAGTGTTTTCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATgcgc < 1:574491/238‑1 (MQ=255) aTTCGATCCGTTTGCCGCACCAACGGCACGCGCCGCGCCAGGACGGCCCAATTGCTCAGCCAGTTGGCCGTAAT‑GCATTACCTGCCCGCAGGGGATAGTGCGTAGGGTTTTCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCCGACAAATATTCCCGAAGCTTGTCGCTTAAACCGCCCGGATGGGTGGCAGAAATgggc > 2:796722/1‑238 (MQ=255) ctcttttgccacccacgcGGCGCGCGCCGGGCCGGGCCGGCCAATTTGCTCAGCCAGTTGGCTGAAAT‑GCTTTCCCTGCCCGCAGGGGATAGTGCGTAGTGTTTTACAGACGT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATCCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGc < 2:377628/222‑1 (MQ=255) tttGCCGCACCAACGGCACGCGCCGCGCCAGGACGGCCCAATTGCTCAGCCAGTTGGCCGTAAT‑GCATTACCTGCCCGCAGGGGATAGTGCGTAGTGTTTTCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCACTAATGCTAAGCTTACCGGCAAAATATTCACGGAGCTTTTCGCTTAAACCCCCTGGACTGGTGGCCGAAATGCGCTCATAGCctct > 2:239875/1‑237 (MQ=255) cGCACCAACGGCACGCGCCGCGCCGGGACGGCCCAATTGCTCAGCCAGTTGGCCGTAAG‑GCATTACCTGCCCGCAGGGGATAGTGCGTAGTGTTTTCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTg < 1:124184/238‑1 (MQ=255) cGCACCAACGGCACGCGCCGCGCCAGGACGGCCCAATTGCTCAGCCAGTTGGCCGTAAT‑GCATTACCTGCCCGCAGGGGATAGTGCGTAGTGTTTTCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTg < 1:11452/238‑1 (MQ=255) ggccggcgtcgcgccATGACGGCAAATGTGATCGGCCAG‑TGGCCGGAATGGCATTCCCTGCCGGCAGGGGATAGTGAGGAGGGGTGTGAAGACTT‑CGGGAGGAAAGGGCGTCCCCCCAGTAGGAGGGGGAAGCG‑TATCAATAATGCAAAGATTACCGGAAAAATATTCCCGAAGCTGGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATgg < 2:144785/233‑1 (MQ=255) gcgccgcgccAGGAGGGCCCAATTGCACAGCCAGTTGGCCGTAAT‑GCATTCCCGGCCCGCAGGGTATAGGGCGTAGGGTTTTCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGGGGGAAGCG‑TATCAATAATGCTAAGATTACCGGAAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTcc < 1:239875/239‑1 (MQ=255) gcgccgagccAGGCCGGCCCAATTGCTCAGCCAGTTGGCCGTAAG‑TCCTTACCTGCCCGGAGGGGATAGTGCGTAGTTTTTTCCAGACTT‑CGCGCTGAAAGGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGGCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTcc < 1:645167/239‑1 (MQ=255) cgcccgcgccAGGCCGGCCCAATTGCTCAGCCAGTTGGCCGTAAT‑GCATTACCTGCCCGAAGGGGATAGTGCGTAGTGTTTCCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGGGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTcc < 1:576446/236‑1 (MQ=255) cgcccccgccgggcctgccataTTTCTCAGCCTGTTGGCCGTAAT‑GCATTACCTGCCCCGGGGGGATAGGGCTTAGTGTTTTCCAGCCTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCATTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTcc < 2:133715/218‑1 (MQ=255) cgccgcgccAGGACGGCCCAATTGCTCAGCCAGTTGGCCGTAAT‑GCATTACCTGCCCGCAGGGGATAGTGCGTAGTGTTTTCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAAAGCGCCCCTAGCCTTCTTTGCGAAAAAGGGTTTccc > 2:836007/1‑238 (MQ=255) gcgccGGGCCGGCCCAATTGCCCGGCCGTTTGGCCGTAAA‑GCATTCCCGGCCCGGAGGGGATAGTGCGGAGTGTTTTCCAGACTT‑CGCGCTGAATGGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TTTCAATAATGCTAAGATGACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCcagcag < 2:635126/239‑1 (MQ=255) gccggggcgggcgatttGCTGAGCCGTGTGGCCGACAT‑TCATTACCGGCCCGCAGGGGATGGGGCGTGGTGTTGTCCAGACGT‑CGCGCGGAAATGGCCTCCCCCCAGTGGAAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGAAAAATATTCAAGAAGCTTGCCGCTTAAACCGCCTGGATTGGTGGCAGAAAGGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCagcagc < 2:635637/223‑1 (MQ=255) gCCCAATTGCTCAGCCAGTTGGCCGTAAT‑GCATTACCTGCCCGCAGGGGATAGTGCGTAGTGTTTTCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGTGCTCCTAGCCTTCTTTTCGATAATGGATGTCCAGCACCTGCCCCCTGc > 2:642113/1‑239 (MQ=255) cccAATTGCTCAGCCAGTTGGCCGTAAT‑GCATTACCTGCCCGCAGGGGATTGTGCGTAGGGTTTTCCAGACTT‑CGCGCTGTAATGGCGTCACCCCCGTAGCCGTGGGAAGCG‑TATCAATAATGCTCAGATTACCTGCAAAATATTCACGCAGCTTGTCCCTTAAACCGCCTGGATTGGTGGCAGAAAATCGCGCAATCCCTTCTTTGCGAAAATGGATggcaaacacgtgccccatacc > 2:856764/1‑219 (MQ=255) cccAATTGCCCAGCCAGGTGGCCGTAAT‑GCATTCCCTGCCCGCAGGGGATAGTGCGTAGTTTTTTCCAGTCTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGc < 1:561066/238‑1 (MQ=255) aTTGGTCAGCCAGTTGGCCGTAAT‑GCATTGCCGGCCCGCAGGGGTTAGTGCGTGGTGTTTTCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCg < 1:79861/239‑1 (MQ=255) cAGCCAGTTGGCCGTAAT‑GCATTACCTGCCCGCAGGGGATAGTGCGTAGTGTTTTCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTCAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGt > 1:279183/1‑237 (MQ=255) cAGCCAGTTGGCCGTAAT‑GCATTACCTGCCCGCAGGGGATAGTGCGTAGTGTTTTCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAAAATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATCCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCCGCACCATGCGTTCCCTgga > 2:604463/1‑236 (MQ=255) ccAGTTGGCCGTAAT‑GCATTACCTGCCCGCAGGGGATAGTGCGTAGTGTTTTCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTActc > 1:91656/1‑238 (MQ=255) cggctctAAT‑GCATTCCCTGCCCGCAGGGCATAGGGCGTAGTGTTTTCCAGACTT‑CGCGTTGAAATGGCGTCCCCCCCGTAGCGGTGGGAAGCG‑TATCAATAATGCTAAGTTTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCa < 1:253734/233‑1 (MQ=255) cctAAT‑TCCTTTCCCGCCCGGAGGGGGTAGTGGGTGTTTTGTTCCAGACTTGCGGCTTGAATGGGCGCCCCCCCCGT‑GGAGGGGGGAGCGTTACCAAAAAGTCTAAGATTCCGGGAAAAATATTCAGGAAGTTTGCCGTTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCAtt < 2:897295/236‑1 (MQ=255) tttcccTCCCCGGGGGGGATTGGGGGTTGTGTTTCCCAGTCTT‑CGCCGTGAAATGGCGTCCCCCCCGGAGCAGGGGGAAGCT‑TATCAATAATGCTAAGATCCCCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAAccgcccg < 2:408567/235‑1 (MQ=255) tACCTGCCCGCAGGGGATAGTGCGTAGTGTTTTCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCa > 1:62955/1‑239 (MQ=255) gCCCGCAGGGGATAGTGCGTAGTGTTTTCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCCTGCGTTCGCTGTACTCTTCCCATTCAACCGACCCAAGGCGa > 2:747195/1‑239 (MQ=255) cccGCAGGGGATAGTGCGTAGTGTTTTCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGaa > 1:277708/1‑239 (MQ=255) cAGGGGATAGTGCGTAGTGTTTTCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAAtt > 1:590322/1‑238 (MQ=255) gtgggtgtgtgtTTTCCAGACTT‑CGCGGTGAAATGGCGCCCCCCCCGTAGCAGTGGGAAGCG‑TAGCAATAATGCTAAGAGTCCCGGAAAAATATTCGCGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCTCATCGc < 2:377873/231‑1 (MQ=255) ttAGTTTTTTCCGGTCTT‑CGCGTTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TAACAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCTCATCGCAAAt < 2:379631/237‑1 (MQ=255) aGTGTTTTCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCTCAACGCAAATCa > 2:12473/1‑238 (MQ=255) tgtttgccagtattcggcgtggAAATGGCTTCCCCCCCGTGTCGGGGGGAAGGG‑TATCAATAATGCTAATATTACCGGCAATATTTTAGCGAAGCGTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCTCATCGCAAATCAcc < 2:279183/218‑1 (MQ=255) tttttCCAGCCTT‑CGGCCTGAAATGGCTCCCCCCCCGTAGCAGTGGGAAGCG‑TAACAATAATGCTAAGATTACCGGAAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCTCATCGCAAATCAccc < 1:836007/237‑1 (MQ=255) tttCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCcagcag > 2:686751/1‑165 (MQ=255) tttCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCcagcag < 1:686751/165‑1 (MQ=255) tCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATTCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCTCATCGCAAATCACCCACAGt > 2:650341/1‑239 (MQ=255) tCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCTCATCGCAAATCACCCACAGt > 1:499322/1‑239 (MQ=255) aCTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCCCTGTACTCTTCCCATTAAACCGCCCGCAGGCGAAATTGCCCA‑CGCaaaaacaccaccagggcac > 2:833304/1‑222 (MQ=255) cgcgCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCTCATCGCAAATCACCAACAGTGGACCCAgt > 1:777822/1‑239 (MQ=255) ccccccGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGCAATTGCTCATCGCAAATACCCCACAGTGGACCCAGTGGCGGGGCAAatttttt > 1:559283/1‑238 (MQ=255) aGCAGAGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGACTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGACCTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCTCATCGCAAATCACCCCCAGTGGACCCAGTGGCGTGGCAAATTTttcttacaaaa > 2:152441/1‑233 (MQ=255) cAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAACCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTAAACCGCCCCCAGGCGAAATTGCTCATCGCCAATCACCCACACTGGAACCAGTAGCGGGGTGATTTTTTTTTTAAGTaa > 1:761539/1‑238 (MQ=255) tGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGGTTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCTCATCGCACATCACCCACAGTGGACCAAGGGGCGTGGCAATTTTTTTTTCaaaaaaaccc > 2:374145/1‑231 (MQ=255) tGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCCCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCCCATCGCAAATCACCCACAGTGGACCCCGTGGGGTGGCAAATTTTTTTTCaaaaacactc > 2:5669/1‑231 (MQ=255) gggAAGCT‑CTTCAATAATGTTAAGATTCCGGGAAAAATATTCCCGAAGCTTGGCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCTCATCGCAAATCACCCACAGTGGACCCAGTGGCGTGGCAATTTTTTCTTCAAGTAAtctc < 2:78616/238‑1 (MQ=255) gggAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCTCATCGCAAATCACCCACAGTGGACCCAGTGGCGTGGCAATTTTTTCTTCAAGTAAtctc > 1:771672/1‑238 (MQ=255) ggAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCTCATCGCAAATCACCCACAGTGGACCCAGTGGCGTGGCAATTTTTTCTTCAAGTAATCTCa > 1:78616/1‑238 (MQ=255) ggAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCTCATCGCAAATCACCCACAGTGGACCCAGTGGCGGGGCAAATTTTTCTTTAAGTAATCTCa > 1:563765/1‑238 (MQ=255) gAAGCG‑TAAAAAAAATGCTAAGGTTACCGGCAAAATATTCCCGAAGCTTGCCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCTCATCGCAAATCACCCACAGTGGACCCAGTGGCGTGGCAATTTTTTCTTCAAGTAATCTCAg < 1:374145/238‑1 (MQ=255) aTCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCTCATCGCAAATCACCCACAGTGGACCCAGTGCCGGGGCAATTTTTTTTTCAAGAAACCCCAACAACCGt > 2:466579/1‑238 (MQ=255) tcaatttttcTAAGTTTCCCGGAAAAATTTTCACGAACTTTGTCTCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCTCATCGCAAATCACCCACAGTGGACCCAGTGGCGTGGCAATTTTTTCTTCAAGTAATCTCAGCATCCGTtc < 2:91656/230‑1 (MQ=255) tCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCTCATCGCAAATCACCCACAGTGGACCCAGTGGCGTGGCAATTTTTTCTTCAAGTAATCTCAGCATCCGTtc < 1:604463/239‑1 (MQ=255) tCAATAATGCAAAGATTACCGGAAAAATATTCACGAACCTTGGCCCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCTCATCGCAAATCACCCACAGTGGACCCAGTGGCGTGGCAATTTTTTCTTCAAGTAATCTCAGCATCCGTtc < 1:642113/239‑1 (MQ=255) tCAATAAGGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCTCATCGCAAATCACCCACAGTGGACCCAGTGGCGTGGCAATTTTTTCTTCAAGTAATCTCAGCATCCGTtc < 1:796722/239‑1 (MQ=255) tGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGGTCATCGCAAATCAACCCCACGGGACCCAGTGGCGGCGACATTTTTTCTTCAAATAATCccaccacacagtctccctta > 2:840993/1‑225 (MQ=255) aaGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCTCATCGCAAATCACCCACAGTGGACCCAGTGGCGTGGCAATTTTTTCTTCAAGTAATCTCAGCATCCGTTCTCTCTTAAGa < 1:833304/238‑1 (MQ=255) aGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCTCATCGCAAATCACCCACAGTGGACCCAGTGGCGTGGCAATTTTTTCTTCAAGTAATCTCAACATCCGTTCTCTCTTAAGACa > 1:588830/1‑239 (MQ=255) aTTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCCCATCGCAAATCACCCACAGTGGACCCAGTGGCGTGGCAATTTTTTCTTCAAGGAATCCCAAAATCCGTTCTCCCTTAAGAaaaa > 2:819025/1‑239 (MQ=255) ttccGGCAAAATTTTCACGAGTCTTTTCTTTTAAACCGCCTGGATTGGGGGCAGAAATGCGCTCATAGCCGTCTTTTCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCTCATCGCAAATCACCCACAGTGGACCCAGTGGCGTGGCAATTTTTTCTTCAAGTAATCTCAGCATCCGTTCTCTCTTAAGACAAACg < 2:478367/237‑1 (MQ=255) aCCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCTCATCGCAAATCACCCACAGTGGACCCAGTGGCGTGGCCATTTTTTTTTCCAGTAATCTCAACATCCGTTCTCCCTTAAGACAAACGt > 1:818161/1‑239 (MQ=255) | TCATGGTGCCGTTTCGGCCAATAACCCGATGGCAAGGTACGACGATGCTGATGGGATTCGATCCGTTTGCCGCACCAACGGCACGCGCCGCGCCAGGACGGCCCAATTGCTCAGCCAGTTGGCCGTAAT‑GCATTACCTGCCCGCAGGGGATAGTGCGTAGTGTTTTCCAGACTT‑CGCGCTGAAATGGCGTCCCCCCCGTAGCAGTGGGAAGCG‑TATCAATAATGCTAAGATTACCGGCAAAATATTCACGAAGCTTGTCGCTTAAACCGCCTGGATTGGTGGCAGAAATGCGCTCATAGCCTTCTTTGCGATAATGGATGTCCAGCAGCTGCACCATGCGTTCGCTGTACTCTTCCCATTCAACCGCCCGCAGGCGAAATTGCTCATCGCAAATCACCCACAGTGGACCCAGTGGCGTGGCAATTTTTTCTTCAAGTAATCTCAGCATCCGTTCTCTCTTAAGACAAACGT > NC_000913/1399789‑1400259 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |