Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 71,877 A→G 18.0% E176G (GAG→GGG)  yabI → DedA family inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00091371,8770AG18.0% 120.9 / 3.7 56E176G (GAG→GGG) yabIDedA family inner membrane protein
Reads supporting (aligned to +/- strand):  ref base A (9/35);  new base G (8/3);  total (17/39)
Fisher's exact test for biased strand distribution p-value = 1.86e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CTTGATAAAACTGAACATGCGTTGCATCAACACAGCATGTTCACCATTCTGGTCGGTCGTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGAATGCTGGATCTGCCGGTGGCTAAATTTATTACGCCGAATATTATCGGCTGCCTGCTGTGGCCGCCGTTTTACTTCCTGCCAGGGATTCTGGCGGGCGCGGCGATCGATATTCCTG‑CCGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGC‑GGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTG‑ACGCCGTTGATTTCTGCCATCGGCGTGGT‑GG‑CGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGG  >  NC_000913/71642‑72109
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                            
ctTGATAAAACTGAACATGCGTTGCATCAACACAGCATGTTCACCATTCTGGTCGGTCGTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGAATGCTGGATCTGCCGGTGGCTAAATTTATTACGCCGAATATTATCGGCTGCCTGCTGTGGCCGCCGTTTTACTTCCTGCCAGGGATTCTGGCGGGCGCGGCGATCGGTATTCCTT‑CCGGAATGC‑CGAGC‑GGTGAggt                                                                                                                                                                                                                                           >  1:192362/1‑237 (MQ=255)
        aaCTGAACATGCGTTGCATCAACACAGCATGTTCACCATTCTGGTCGGTCGTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGAATGCTGGGTCTGCCGGTGGCTAAATTTATTACGCCGAATATTATCGGCGGCCTGCTGTGGCCGCCGTTTTACTTCCTGCCAGGGATTCTTGCGGGCGCTGCGCTCGATATTCCTG‑CCGGGATGC‑AGGGC‑GGTGAGGTTAAATGGt                                                                                                                                                                                                                                   >  1:915249/1‑239 (MQ=255)
        aaCTGAACATGCGTTGCATCAACACAGCATGTTCACCATTCTGGTCGGTCGTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGAATGCTGGATCTGCCGGTGGCTAAATTTATTACGCCGAATATTATCGGCTGCCTGCTGTGGCCGCCGTTTTACTTCCTGCCAGGGGTTCTGGCGGGCGCGGCGATCGATATTCCTG‑CCGGAATGC‑CAAGC‑GGGGGGTTTAAAAGGt                                                                                                                                                                                                                                   >  1:814182/1‑239 (MQ=255)
          cTGAACATGCGTTGCATCAACACAGCATGTTCACCATTCTGGTCGGTCGTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGAATGCTGGATCTGCCGGTGGCTAAATTTATTACGCCGACTATTATCGGCTGCCTGCTGTGGCCGCCGTTTTACTTCCTGCCCGGGATTCTGGCGGGCGGGGGGGCCGGATTTTCTG‑CCGGGATGCGAGGGG‑GGTGGGTTTAAAggggt                                                                                                                                                                                                                                  >  2:711018/1‑237 (MQ=255)
          cTGAACATGCGTTGCATCAACACAGCATGTTCACCATTCTGGTCGGTCGTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGAATGCTGGATCTGCCGGTGGCTAAATTTATTACGCCGAATATTATCGGCTGCCTGCTGTGGCCGCCGTTTTACTTCCTGCCAGGGATTCTGGCGGGGGCGGGGTTCGCATTTCCTT‑CCGGGATGC‑CAGGC‑GGTGGGGTTTAATGGtgt                                                                                                                                                                                                                                 >  1:116112/1‑237 (MQ=255)
                       tcatgaaccaagttttttCCCCAGTTTGGTGGGGCTTTTTTGTGGCCCGCCGCGTCCGCTGGGGACATGGGTGGGGGTAATGTTGGGTCTGCCGGTGGCTAAATTTATTACGCCGAATTTGATCGGCGGCCTGCTGTGGCCGCCGTTTTACTTCCTGCCAGGGATTCTGGCGGGCGCGGCGATCGATATTCCTG‑CCGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAg                                                                                                                                                                                                                    <  2:346976/223‑1 (MQ=255)
                       gCATCAACACAGCATGTTCACCATTCTGGTCGGTCGTTTTGTTGGCCCCACGCGTCCGCTGGTGCCAATGGTGGCGGGAAAGCGGGATCGGCCGGTGGCTAAATTTATTACGCCGGATATTTTTGGCGGCCTGCTGTGGGCGCCGTTTTCGTTCCTGCCCGGGATTTTGGCGGGCGCGGGGATCCATTATCTTG‑CCGGGGAGG‑AGCGG‑GGCGAGTTTGAATTGTTGTTACTGGTCACAg                                                                                                                                                                                                                    >  2:560501/1‑239 (MQ=255)
                         aTCAACACAGCATGTTCCCCATTCTGGTCGGTTGTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGAATGCTGGATCTGCCGGTGGCTAAATTTATTACGCCGAATATTATCGGCTGCCTGCTGTGGCCGCCGTTTTACTTCCTGCCAGGGATTCTGGCGGGCGCGGCGATCGATATTCCTG‑CCGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCg                                                                                                                                                                                                                  <  1:197183/239‑1 (MQ=255)
                         aTCAACACAGCATGTTCACCATGCTGGTCGGTCGTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGGGGCGGGAATGCTGGATCTGCCGGTGGCTAAATTTATTACGCCGAATATTATCGGCTGCCTGCTGTGGCCGCCGTTTTACTTCCTGCCAGGGATTCTGGCGGGCGCGGCGATCGATATTCCTG‑CCGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCg                                                                                                                                                                                                                  <  1:711018/239‑1 (MQ=255)
                            aacccggcgttttCCCCATTCTGGTCGGTCGTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAAGGGTGGCGGGAATGCTGGATCTGCCGGTGGCTAAATTTATTACGCCGAATATTATCGGCTGCCTGCTGTGGCCGCCGTTTTACTTCCTGCCAGGGATTCTGGCGGGCGCGGCGATCGATATTCCTG‑CCGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGgtg                                                                                                                                                                                                               <  1:907308/228‑1 (MQ=255)
                                  gCATGTTCACCATTCTGGTCGGTCGTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGAATGCTGGATCTGCCGGTGGCTAAATTTATTACGCCGCATATTATCGCCTGCCTGCTTGGGCCGCCGTTTTACTTCCTCCCAGGGATTTTGGCGGGGGCGGGGATCGTGATTCCTG‑CCGGCGTTG‑AGAGG‑GGGGAGTTTAAATGGTGTGTCCTGGGAACACGGGGGtttttt                                                                                                                                                                                                         >  2:673102/1‑238 (MQ=255)
                                  gCATGTTCACCATTCTGGTCGGTCGTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGAATGCTGGATCTGCCGGTGGCTAAATTTATTACGCCGAATATTATCGGCTGCCTGCTGTGGCCGCCGTTTTACTTCCTGCCAGGGATTCTGGCGGCGCCGGCGATCGATATTCCTG‑CCGGAATGC‑AGAGC‑GAGGGGTTTAAATGGGTGCTGCTGGCAACACGGGGGGTTTtg                                                                                                                                                                                                         >  1:17002/1‑239 (MQ=255)
                                   cATGTTCACCATTCTGGTCGGTCGTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGAATGCTGGATCTGCCGGTGGCTAAATTTATTACGCCGAATATTATCGGCTGCCTGCTGTGGCCGCCGTTTTACTTCCTGCCAGGGATTCTGGCGGGCCCGGCGATCGATATTCCTG‑CCGGAATGC‑AGGGC‑GGTGAGGTTGAATGGTTGGTGCTGGCAACAGGGGGGgtttttt                                                                                                                                                                                                        >  1:584822/1‑237 (MQ=255)
                                                   gtcggtcgTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGTCGGGAATGCTGGGTCTGCCGGCGGCTAAATTTATTACGCCGAATATTATCGGCTGCCTGCTGTGGCCGCCGGTTTACTTTCCGCCAGGGATTCTGGCGGGCGCGGGGATGGCATGTCCTG‑GCGGAAGGC‑GGAGG‑GGGGGGGTTTAATGGGTGCTGGTGGCAACGGGGGGGGTTTTGgggggcggggggggggg                                                                                                                                                                                        >  2:727129/1‑226 (MQ=255)
                                                   gtcggtcgTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGACTGCTGGATCTGCCGGTGGCTAAATTTATTACGCCGAATATTATCGGCTGCCTGCTGTGGCCGCCGTTTTACTTCCCGCCAGGGATTCTGGCGGGCGCGGGGGTCGCGATTTCTG‑CCGGGATGC‑AGAGC‑GGGGGGGTTTAATGGGGGGTGGTGGCGACCGCGGGGttttttggggggggggggggggg                                                                                                                                                                                        >  2:847778/1‑221 (MQ=255)
                                                   gtcggtcgTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGAATGCTTGATCTGCCGGTGGCTAAATTTATTACGCCGGATATTATCGGCCGCCAGCTGTGGTCGCCGGTTTACTTCCTTCCAGGGATTCTGGCGGGGGCGGGGATCGATATTTCTG‑CCGGAATTG‑AGAGC‑GGGGGGTTTAAAATGTTGCTGTTGCGGCCAGCGGTGTTTTTGTgggggggggggtgggt                                                                                                                                                                                        >  2:619397/1‑226 (MQ=255)
                                                      ggtcgTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGAATGCTGGATCTGCCGGTGGCTAAATTTATTACGCCGAATATTATCGGCTGCCTGCTGTGGCCGCCGTTTTACTTCCTGCCAGGGATTCTGGCGGGCGCGGCGATCGCTATTCCTG‑CCGGAATGC‑AGAGC‑GGGGGGGTTAAATGGTTGCTGCTGGCAACAGCGGGGTTTTTGTGGGTTGGGGgctggctggg                                                                                                                                                                                     >  1:281678/1‑237 (MQ=255)
                                                           ttttGTTGGCGCGTCGGTTCCGCTGTTGCCATGGGTGGGGGGAATGGGGGATTGGCGGGGGGTAAAATTTATTACGCAGAATATGATGGGCTGCCGGGTGGGGCCGCCGTTTTACTTCCTGCCAGGGATTCTGGCGGGCGCGGCGATCGATATTCCTG‑CCGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGc                                                                                                                                                                                <  2:192362/239‑1 (MQ=255)
                                                                    gccggggggTCCGGTGGTCGAAATGGTGGCGGGAATGCTGGATCTGCCGGTGGCTAAATTTATTACGCCGAATATTATCGGCTGCCTGCGGTGGCCGCCGTTTTACTTCCTGCCAGGGATTCTGGCGGGCGCGGCGATCGATATTCCTG‑CCGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATgg                                                                                                                                                                        <  1:220770/230‑1 (MQ=255)
                                                                     ccgccgGGTCGGCTGGTGCCAATGGGGGCGTGAATGCTGGATCTGCGGGTGGCTAAATTTATTACGCTGAATATGATCGGCTGCCTGCTGTGGCCGCCGTTTTACTTCCTGCCAGGGATTCTGGCGGGCGCGGCGATCGATATTCCTG‑CCGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGgcg                                                                                                                                                                      <  1:762029/239‑1 (MQ=255)
                                                                     ccGGCGCGTCCGCTGGGGCCAAGGGGGGCGGTAATGTCGGATCTGCCGGTGGCTAAATTTATTACGCCGAATTTTATCGGCTGCCGGCTGTGGCCGCCGTTTTACTTCCTGCCAGGGATTCTGGCGGGCGCGGCGATCGATATTCCTG‑CCGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGgcg                                                                                                                                                                      <  1:133705/239‑1 (MQ=255)
                                                                              ccGCGGGTGCCAATGGGGGCGGAAATGCTGTACCTGCCGGTGGCTAAATTTAGTACGCTGAATATTAGCGGCTGCCTGCTGTGGCCGCCGTTTTACTTCCTGCCAGGGATTCTGGCGGGCGCGGCGATCGATATTCCTG‑CCGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGC‑GGTa                                                                                                                                                             <  1:619397/238‑1 (MQ=255)
                                                                                   ggTGCCATTGGGGGGGGGAATGCTGGATCTGCCGGTGGCTAAATTTATTCCGCCGAATATTATGGGCTGCCTGCTGTGGCCGCCGTTTTACTTCCTGCCAGGGATTCTGGCGGGCGCGGCGATCGATATTCCTG‑CCGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGC‑GGTAAAGCGa                                                                                                                                                       <  1:902768/239‑1 (MQ=255)
                                                                                     ggcaaaggggggCGGGAATGCTGGATTTGCCGGTGGCTAAATTTATTACGCCGAATATTATCGGCTGCTTGCTGTGGCCGCCGTTTTACTTCCTGCCAGGGATTCTGGCGGGCGCGGCGATCGATATTCCTG‑CCGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGC‑GGTAAAGCGa                                                                                                                                                       <  1:810372/227‑1 (MQ=255)
                                                                                                   gggcttcTGGTTGTGGCGGTGCTTATATTTATGTCGCCGAATTTTAGCGGCTGCCTGCTGTGGCCGCCGTTTTCCGTCCGGCCAGGGATTCTGGCGGGCGCGGCGATCGATATTCCTG‑CCGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGC‑GGTAAAGCGACTGACCGTTTGAGTc                                                                                                                                        <  2:915249/232‑1 (MQ=255)
                                                                                                                 gCCGGGGGCTAAATTTATTACGCCGAATATTAGTGGCTGCCGGCGGTGGCCGCCGTTTTACTTCCTGCCAGGGATTCTGGCGGGCGCGGCGATCGATATTCCTG‑CCGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGC‑GGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCcgcg                                                                                                                         <  1:501880/239‑1 (MQ=255)
                                                                                                                           tatttttttgccccgattttttgcggcggCCTGCTGTGGCCGCCTTTTTACTTCCTGCCAGGGATTCTGGCGGGCGCGGCGATCGATATTCCTG‑CCGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGC‑GGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTttgtt                                                                                                               <  2:821722/216‑1 (MQ=255)
                                                                                                                                        cGAATTTTCTCGTGTGCTTGTTGTTGCCGCCGTTTTACTTCCGGCCAGGGATTCTGGAGGGCGCGGCGATCGATATTCCTG‑CCGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGC‑GGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTG‑ACGCCg                                                                                                 <  2:116112/239‑1 (MQ=255)
                                                                                                                                          aaTATTATCGGCTGCCTGCTGTGGCCGCCGTTTTACTTCCTGCCAGGGATTCTGGCGGGCGCGGCGATCGATATTCCTG‑CCGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGC‑GGTaa                                                                                                                                                            <  1:428307/179‑1 (MQ=255)
                                                                                                                                              ttatCGGCTGCCTGCTGTGGCCGCCGTTTTACTTCCTGCCAGGGATTCTGGCGGGCGCGGCGATCGATATTCCTG‑CCGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGC‑GGTAAAGCGACTGACCGTTTGAGTc                                                                                                                                        <  1:636541/195‑1 (MQ=255)
                                                                                                                                                gtCGGCTGCCTGTTGTGGCCGCCGTTTTACTTCCTGCCAGGGATTCTGGCGGGCGCGGCGATCGATATTCCTG‑CCGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGC‑GGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTG‑ACGCCGTTGATTTc                                                                                         <  1:292877/238‑1 (MQ=255)
                                                                                                                                                       gcctgcTGTGGCCGCCGTTTTCCTTCCGGCCAGGGATTCTGGCGGGCGCGGCGATCGATATTCCTG‑CCGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGC‑GGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTG‑ACGCCGTTGATTTCTGCCAt                                                                                   <  1:475756/238‑1 (MQ=255)
                                                                                                                                                        cctgcTGTGGCCGCCGTTTTACTTCCTGCCAGGGATTCTGGCGGGCGCGGCGATCGATATTCCTG‑CCGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGGGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTTTTGCGGCGC‑GGGAAAACGACTGGCCGTTTGTGTCATTATTTTTTCCGCGGGCGGTTGTTTTGGCTG‑TCACCCGTGGTTTTTGCCCTCg                                                                                 >  1:483794/1‑239 (MQ=255)
                                                                                                                                                                    gccgTTTTACTTCCTGCCAGGGATTCTGGCGGGCGCGGCGATCGATATTCCTG‑CCGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGGTGGTGGCTGGCTGTGCTGGCGGTTTTGGGGCCGCGGGTGAAGGGACGGCCCGTTTGAGGATTTATTTTTCCCCCGG‑GGTTTGTTTGGGGTGCTCGCCTTTGTTTTTTGTTATCGGCGgggg‑gggg                                                                     >  2:690553/1‑237 (MQ=255)
                                                                                                                                                                      tcttttTCTTTCTGGCAGGGTCTTTGGGGTGCGGGGGGATCTGGTTTCCTG‑CCGGAATGA‑AGGGCGGGTGTGTTT‑AATGGTTGCTGCTGGCACCAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGC‑GGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTG‑ACGCCGTTGATTTCTGCCATCGGCGTGGT‑GG‑CGCtg                                                                 <  2:814182/237‑1 (MQ=255)
                                                                                                                                                                                        ggATTCTGGCGGGCGGGGCGATCGATATTCCTG‑CCGGAATGC‑AGGGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGC‑GGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTG‑ACGCCGTTGATTTCTGCCATCGGCGTGGT‑GG‑CGCTGGTGGTGTTAATTCGCCa                                                <  1:690487/238‑1 (MQ=255)
                                                                                                                                                                                         gATTCTGGCGGGCGCGGCGATCGATATTCCTG‑GCGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGC‑GGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTG‑ACGCCGTTGATTTCTGCCATCGGCGTGGT‑GG‑CGCTGGTGGTGTTAATTCGcc                                                 <  1:394374/236‑1 (MQ=255)
                                                                                                                                                                                             ggggggggcggggcgTTGGATTTCCCGG‑GCGGAATGC‑AGAGG‑GGTGAGTTTAAATGGTTGCGGCTGGCAACAGCGGTGTTGTTGGGGGTGGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGC‑GGTAAAGCGACTGACCGGTCGAGTCATTATGTGTCCCGCGGTCGTTTGTTGTGGCTG‑ACGCCGTTGATTTCTGCCATCGGCGTGGT‑GG‑CGCTGGTGGTGTTAATTCGCCACCCGtt                                          <  2:666934/234‑1 (MQ=255)
                                                                                                                                                                                                  gggcgCGGCGTTCGATATTCCTG‑CCGGAATTC‑AGAGG‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGGGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGC‑GGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTG‑ACGCCGTTGATTTCTGCCATCGGCGTGGT‑GG‑CGCTGGTGGTGTTAATTCGCCACCCGTTGATGc                                     <  2:248822/239‑1 (MQ=255)
                                                                                                                                                                                                  gggcgCGGCGATCGATATTCCTG‑CCGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGC‑GGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTG‑ACGCCGTTGATTTCTGCCATCGGCGTGGT‑GG‑CGCTGGTGGTGTTAATTCGCCACCCGTTGATg                                      <  1:298896/238‑1 (MQ=255)
                                                                                                                                                                                                    gcgcGGCGATCGATATTCCTG‑CCGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGC‑GGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTG‑ACGCCGTTGATTTCTGCCATCGGCGTGGT‑GG‑CGCTGGTGGTGTTAATTCGCCACCCGTTGATGcc                                    <  1:673102/238‑1 (MQ=255)
                                                                                                                                                                                                     cgcgGCGATCGATATTCCTG‑CCGGAATGC‑AGGGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGC‑GGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTG‑ACGCCGTTGATTTCTGCCATCGGCGTGGT‑GG‑CGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCg                                   <  1:690553/238‑1 (MQ=255)
                                                                                                                                                                                                        cggggtctggtttCCTGTCCGGAATGG‑AGAGG‑TGTGAGTTTAAATGGGTGCTGCGGGCAACAGCGGTTTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGGGGTTATGGAGCAGC‑GGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTG‑ACGCCGTTGATTTCTGCCATCGGCGTGGT‑GG‑CGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGgtg                                <  2:847784/228‑1 (MQ=255)
                                                                                                                                                                                                              cgatATTCCTG‑CCGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGC‑GGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTG‑ACGCCGTTGATTTCTGCCATCGGCGTGGT‑GG‑CGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATc                          <  1:510042/238‑1 (MQ=255)
                                                                                                                                                                                                                        cctggctgaatgggggggggTGGGTTTAAATGGTTGCTGCTGGCAACGGGGGTTGTTTTGGGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGC‑GGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTG‑ACGCCGTTGATTTCTGCCATCGGCGTGGT‑GG‑CGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATAtttt                  <  2:584822/221‑1 (MQ=255)
                                                                                                                                                                                                                          ccGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTTTGGGGCCGC‑GGTAAAACGACTGGCCGGTTTGGTCCTTTTTTTTTCCCCGGGCGTTTTTTTTGGCTG‑GAGGCCTTGTTTTTTTCCCTCTGCGTGGT‑GGTGGCGGGTGGGGTTATTTGCCCCCCCGTGGTTCCGGGGGtatagagtatttttgtg               >  2:430375/1‑226 (MQ=255)
                                                                                                                                                                                                                            ggAATGC‑AGAGG‑GGTTGGTTTAAATGGTTGGTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGGTGGCTGTGCTGGCGGTTATGGCGCAGC‑GGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTG‑ACGCCGTTGATTTCTGCCATCGGCGTGGT‑GG‑CGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTaa            <  1:460988/239‑1 (MQ=255)
                                                                                                                                                                                                                              aaTGC‑AGGGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGC‑GGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTG‑ACGCCGTTGATTTCTGCCATCGGCGTGGT‑GG‑CGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTaaa           <  1:727129/238‑1 (MQ=255)
                                                                                                                                                                                                                              aaTGC‑AGAGC‑TGTGAGTTTAAATGGGTGCGGGTGGCAAGCGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTGTGGCGCAGC‑GGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTG‑ACGCCGTTGATTTCTGCCATCGGCGTGGT‑GG‑CGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTaaa           <  1:127304/238‑1 (MQ=255)
                                                                                                                                                                                                                              aaTGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGC‑GGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTG‑ACGCCGTTGATTTCTGCCATCGGCGTGGT‑GG‑CGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTaaa           <  1:352672/238‑1 (MQ=255)
                                                                                                                                                                                                                                  c‑AGTGC‑GTTGAGTTTAAATGGTTGCTGCTGGCAACAGTGGTGTTTTTGTGGGTTGGTGGTTGGGTGTGGTGGCGGTTCTGGCGCATC‑GGTAAAGCGAGTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTG‑ACGGCGTTGATTTCTGCCATCGGCGTGGT‑GG‑CGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGt      <  1:455359/239‑1 (MQ=255)
                                                                                                                                                                                                                                    agagC‑GGTGAGTTGAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTAGGGCGCAGC‑GGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTG‑ACGCCGTTGATTTCTGCCATCGGCGTGGT‑GG‑CGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGt      <  1:560501/238‑1 (MQ=255)
                                                                                                                                                                                                                                      ggC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGGGGTGTTTTTGGGGGTTGGTGGCTGGCTGTGCTGGCGGTTAGGGCGGAGC‑GGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTG‑ACGCCGTTGATTTCTGCCATCGGCGTGGT‑GG‑CGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTg    <  1:76586/237‑1 (MQ=255)
                                                                                                                                                                                                                                      ggC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGGGGTTATGGCGCAGC‑GGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTG‑ACGCCGTTGATTTCTGCCATCGGCGTGGT‑GG‑CGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTg    <  1:170192/237‑1 (MQ=255)
                                                                                                                                                                                                                                      agC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGGGCAGG‑GGGGAAGGGGATGGCCGGTTGAGTCATTTTTTTTTCCCCGGGCGGTTGTTTTGGCGG‑AGGCCCGTGGTTTTTGGCATCGCCGCGGTGGG‑GGCTGGGGGGGTTTATTTGCCCCCCCTTGTTGCCGGTGTatatgcaattattgtgtgagagggggg    >  2:149648/1‑216 (MQ=255)
                                                                                                                                                                                                                                         gggTGGGTTTAAATGGTTGCTGCGGGCAACCGCGGTGTTTTTGGGGGTTGGTGGCTGGCTGGGCTGGCGGTTATGGCGCAGC‑GGTAAAGCGACTGACCGTTTGAGTCATTAGTTGTCCCGCGGTCGTTTGTTGTGGCTG‑ACGCCGTTGATTTCTGCCATCGGCGTGGT‑GG‑CGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTggg  <  1:275083/237‑1 (MQ=255)
                                                                                                                                                                                                                                              aGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTTTGgcg                                                                                                                                                                      >  1:783867/1‑73 (MQ=255)
                                                                                                                                                                                                                                              aGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGgcg                                                                                                                                                                      <  2:783867/73‑1 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                            
CTTGATAAAACTGAACATGCGTTGCATCAACACAGCATGTTCACCATTCTGGTCGGTCGTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGAATGCTGGATCTGCCGGTGGCTAAATTTATTACGCCGAATATTATCGGCTGCCTGCTGTGGCCGCCGTTTTACTTCCTGCCAGGGATTCTGGCGGGCGCGGCGATCGATATTCCTG‑CCGGAATGC‑AGAGC‑GGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGC‑GGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTG‑ACGCCGTTGATTTCTGCCATCGGCGTGGT‑GG‑CGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGG  >  NC_000913/71642‑72109

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑