| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,854,796 | A→C | 19.0% | V20G (GTG→GGG) | ydjF ← | putative DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,854,796 | 0 | A | C | 19.0% | 154.9 / 2.4 | 77 | V20G (GTG→GGG) | ydjF | putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (35/24); new base C (3/14); total (38/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.88e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAGCTGCTTCTCTTCATAAAACGATGAAGCGCGCTTATAAAAATGGATATTCTCCGTCAACATCGCTGTATTTAAAACAGCACCACCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTACTTTCAAAATAACCTGTTTGAATCACAGATTTTCATCACAGTTTTCACAGAAACAGAGGTGAATCGTGTTGAGTATTTAACGCTCCAGGGCCTCTGCCATTTCCCTCATCAATGT > NC_000913/1854566‑1855029 | tggtggTTTTATTGTCAATAAAGGGTAGTGCCTTGCGTGCAATAAGCTGCTTCTCTTCATAAAACTATGAAGCGCGCTTATAAAAATGGATATTCTCCGTCAACATCGCTGTATTTAAAACAGCACCACCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTa < 1:832716/239‑1 (MQ=255) cGATAAAGGGTAGTGCCTTGCGTGCAATAAGCTGCTTCTCTTCATAAAACGATGAAGCGCGCTTGTAAAAATGGATATTCTCCGTCAACATCGCTGTATTTAAAACAGCACCACCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCAAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCCACCAAATTTGAGACGTTCACCTTTTTATCGTTGGCAACCAtt > 2:117423/1‑239 (MQ=255) cGATAAAGGGTAGTGCCTTGCGTGCAATAAGCTGCTTCTCTTCATAAAACGATGAAGCGCGCTTATAAAAATGGATATTCTCCGTCAACATCGCTGTATTTAAAACAGCACCACCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAACTTTGTGACTGTACCCTTTTTATCGTTGGCACCCCtt > 1:380879/1‑239 (MQ=255) ggTAGTGCCTTGCGTGCAATAAGCTGCTTCTCTTCATAAAACGATGAAGCGCGCTTATAAAAATGGATATTCTCCGTCAACATCGCTGTATTTAAAACAGCACCACCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTgg < 1:41404/223‑1 (MQ=255) gtggTGCCTTGGGTGAAATAAGCTGCTTCTCTTCAAAAAACGATGAAGCGCGATTAGAAAAATGGATATTCCCCGTCAACAACGCTGCATTTAAAACAGCACCACCATAGGTTCTGGTCAAAAA‑GCCTGCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAAt < 2:243888/235‑1 (MQ=255) tAGTGCCTTGCGTGCAATAAGCTGCTTCTCTTCATAAAACGATGAAGCGCGCTTATAAAAATGGATATTCTCCGTCAACATCGCTGTATTTAAAACAGCACCACCATAGGTTCTGGTAAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTAACTGAAAAATCCCACTAAAATTTGCGCATGTAAACATTTTATCTTTGGCAACCATTTGCGTAAtt > 2:828607/1‑238 (MQ=255) tGCCTTGCGTGCAATAAGCTGCTTCTCTTCATAAAACGATGAAGCGCGCTTATAAAAATGGATATTCTCCGTCAACATCGCTGTATTTAAAACAGCACCACCATAGGTTCTGGTCAACAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTACAATTTGAGACTGTCCCCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCt > 1:245941/1‑239 (MQ=255) tGCCTTGCGTGCAATAAGCTGCTTCTCTTCATAAAACGATGAAGCGCGCTTATAAAAATGGATATTCTCCGTCAACATCGCTGTATTTAAAACAGCACCACCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCTTTGGCAACCATTTGCTTAATTg > 1:680590/1‑236 (MQ=255) tGCCTTGCGTGCAATAAGCTGCTTCTCTTCATAAAACGATGAAGCGCGCTTATAAAAATGGATATTCTCCGTCAACATCGCTGTATTTAAAACAGCACCACCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCAACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTCATTCCCt > 1:69490/1‑239 (MQ=255) ttGCGTGCAATAAGCTGCTTCTCTTCATAAAACGATGAAGCGCGCTTATAAAAATGGATATTCTCCGTCAACATCGCTGTATTTAAAACAGCACCACCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCCTTGGCAACCATTTGCTTAATTGCCTGaa > 2:505497/1‑238 (MQ=255) tGCGTGCAATAAGCTGCTTCTCTTCATAAAACGATGAAGCGCGCTTATAAAAATGGATATTCTCCGTCAACCTCGCTGTATTTAAAACAGCACCACCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAACTTCTCAAAATCGCGGCGAATGGTTTCTTCGGTTACCTTAAAAATCCCCATCCAATTTTAGAATGGCACCTTTTTTTCGTTGGCAAACATTTGcccttctcttataacc > 2:41404/1‑224 (MQ=255) tGCGTGCAATAAGCTGCTTCTCTTCATAAAACGATGAAGCGCGCTTATAAAAATGGATATTCTCCGTCAACATCGCTGTATTTAAAACAGCACCACCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTTTCGTTGGCAACCATTTGCTTAATTGccgtaat > 2:753985/1‑233 (MQ=255) ggcttGCAATAAGCCGCTTCTCTTCATAAAACGATGAAGCCCGCTTATAAAAATGGATATTCGCCGTCAATATCGCTGTATTTAAAACCGCACCACCAGAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATc < 1:191870/235‑1 (MQ=255) cAATAAGCTGCTTCTCTTCATAAAACGATGAAGCGCGCTTATAAAAATGGATATTCTCCGTCAACATCGCTGTATTTAAAACAGCACCACCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCt > 1:579462/1‑239 (MQ=255) gctgctTCTCTTCATAAAACGATGAAGCGCGCTTATAAAAATGGATATTCTCCGTCAACATCGCTGTATTTAAAACAGCACCACCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCACCTTCTCAAGATCACGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGACACCTTTTTTACATTGACAACCAATTCCTTAATTGCCTGCATCCTGCCTTTTgcc > 2:191870/1‑239 (MQ=255) tgttttctTCATAAAATGATGAACTGCGCTTAAAAAAATGGATATTCTCCCGCAACACCGCTTTATTTAAAACAGCACCACTATAGGTTCGGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACTTGAAAAATCCCCCTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCGTGAATCCTGTCTTTTgccgcc < 2:874819/234‑1 (MQ=255) gctTCTCTTCATAAAACGATGAAGCGCGCTTATAAAAATGGATATTCTCCGTCAACATCGCTGTATTTAAAACAGCACCACCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTgccgcc < 1:193847/239‑1 (MQ=255) ctTCTCTTCATAAAACGATGAAGCGCGCTTATAAAAATGGATATTCTCCGTCAACATCGCTGTATTTAAAACAGCACCACCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTTACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCa > 1:56378/1‑239 (MQ=255) ttCTCTTCATAAAACGACGAAGCGCGCTTATAAAAATGGATATTCTCCGTCAACATCGCTGTATTTAAAACAGCACCACCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTTAGACTGTCACCTTTTTATCTTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTATTTTTCCCCCAc > 2:315318/1‑239 (MQ=255) ctctTCATAAAACGATGAAGCGCGCTTATAAAAATGGATATTCTCCGTCAACATCGCTGTATTTAAAACAGCACCACCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCCCGa > 1:345548/1‑239 (MQ=255) ttCATAAAACGTTGAAGCGCCTTTATAAAAATGGATTTTCTCCGTCAACATCGCTGTATTTAAAACAGCCCCACCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCCCCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTa < 2:319756/239‑1 (MQ=255) ttCATAAAACGATGAAGCGCGCTTATAAAAATGGATATTCCCCGTCAACATCGCTGTATTTAAAACAGCACCACCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATTGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTa < 1:828607/239‑1 (MQ=255) aCGTTGAAGCGCGCTTAAAAAAATGGATTTTTCCGGTCAACATCGTTGTATTTAAAACAGCACCACCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAAGGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCCCCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTg < 2:570072/239‑1 (MQ=255) tttaaGCGCGCTTATAAAAAGGGATATTCCCCGTCAACCTCGCTTTATTTAAAACAGCCCCCCCATAGGTTCTGTTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTAt < 2:855218/236‑1 (MQ=255) tGAAGCGCGCTTATAAAAATGGATATTCTCCGTCAACATCGCGGTATTTAAAACAGCACCACCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTAt < 1:505497/238‑1 (MQ=255) gcTTATAAAAATGGATTTTCTCCGTCAACATCGCTGTATTTAAAACAGCACCACCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACa < 1:753985/239‑1 (MQ=255) gcTTATAAAAATGGATATTCTCCGTCAACATCGCTGTATTTAAAACAGCACCACCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACa > 1:77053/1‑239 (MQ=255) ccTTAAAAAAATGGATTTTCCCCGTAAAACCCCCTTTATTTAAAACAGCCCCCCCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACa < 2:680590/238‑1 (MQ=255) atatTCTCCGTCAACATCGCTGTATTTAAAACAGCACCACCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGa > 1:546875/1‑239 (MQ=255) attttcccgtaaactaccgtttATTTAAAACAGCCCCACCATAGGTTCTGGTCAAAAA‑GCCTTCACCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGAt < 2:579462/218‑1 (MQ=255) tccttaaacatgcttttATTTAAAACAGCCCCCCCATAGGTTTTGGTCAAAAA‑GCCTTCATCTTCCAGCCTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCg < 2:77053/223‑1 (MQ=255) ccctCAACATCTCTGTATTTAAAACACCACCCCCAATGTTTCTGGTCAAAAA‑GCCTTCATCCTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAACCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGc < 2:99536/236‑1 (MQ=255) tttttaagaaacaattttAAAACCTCCCCCCCATTGTTTTTGGTAAAAAA‑GCCTTCCTCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAATTCCCCCTCAAATTTGAGACTGTCCCCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCAt < 2:253252/224‑1 (MQ=255) tGTATTTAAAACAGCACCACCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGttt > 2:685995/1‑239 (MQ=255) cgCACCACCATAGGTTTGGGTCAAAAA‑GCCTTCATCTTCCAGCTTCCCAAGATCGGGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTACTTTCAAAATa < 1:117423/238‑1 (MQ=255) aGCACCACCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCCCATTAGCGCGATTATCGCATAACCGAGGTTTACTTTCAAAATa > 1:873733/1‑239 (MQ=255) aGCACCACCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTAAATCACATTAACCCGATTAACCCAAAACCGAGGTTTACTTTCaaaaaa > 2:423916/1‑237 (MQ=255) cccccccaTAGGTTC‑GGTGAAAAAGGCTTTCATCTTCCAGATTTCAAAGATCGCGGGTAATGGTTTTTTGGGTTACCGAAAAAATCCCACTTAAATTTGAGACTGTCCCCTTTTTATCGTTGGCAACCATTTGATTAATTTCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTACTTTCAAAATAAc < 2:380879/234‑1 (MQ=255) caccacCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATTACATTAgc > 1:327150/1‑201 (MQ=255) caccacCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGtt > 1:253252/1‑224 (MQ=255) ggTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCTCTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTaca < 2:405109/163‑1 (MQ=255) ggTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTaca > 1:405109/1‑163 (MQ=255) ttCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCCCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTACTTTCAAAATAACCTGTTTGAAt < 1:88047/237‑1 (MQ=255) tCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCa < 1:203132/95‑1 (MQ=255) tCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCa > 2:203132/1‑95 (MQ=255) tCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCCCGATTATCGCATAACCGGTGTTTACTTTCAAAATAACCTGTTTGAAtaaa > 2:475852/1‑236 (MQ=255) tCTGGGCAAAAA‑GCCTTATTTCTCCAGCTTCTCAAGATCGCTGGAAATGGTTTCCTCGGTTCCCTGAAAAATCCCCCTCAAATTTGAGACTGTCACCTTTTTAGCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTACTTTCAAAATAACCTGTTTGAATcac < 2:69490/239‑1 (MQ=255) tGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCCCATTATCGCGATTATCCCATAACCGATGTTTACTTTCAAAAAAACCTGTTTGAATccaag > 2:411814/1‑235 (MQ=255) tGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCCCATTAGCGCGATTATCGCATAACCGCTGTTTACTTTCAAAAAAACCTGTTTGAATCAAAg > 2:719095/1‑239 (MQ=255) tGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCAt > 2:860116/1‑199 (MQ=255) tGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTACTTTCAAAATAACCTGTTTGAATCACAg > 2:676885/1‑239 (MQ=255) tGGTCAAAAA‑GCCTTCATCTTCCAGCTTCCCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCAt < 1:860116/199‑1 (MQ=255) tGGTCAAAAA‑GCCTTCATCTTCCAGCT‑‑TCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTCCCGCCACGATTACACCCCCGTATCTTTTTACATCCCATTATCGCGATTATCGCATAAACGCTGTTTACTTTCAAAAGAACCTGTTTGAATCACAAAt > 2:173905/1‑239 (MQ=255) ggTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGCAACATCCCACTCACATTTGAGACTGTCCCCTTTTTATCGTTGGCAACCATTTGCTTATTTGCCTGAATCCTGTCTTTTGCCTCCACGATTACACCCCTGTTTCTTTTTCCCTCCCATTAACGCGCTTTTCGCATAACCCCTTTTTACTTTCAAAAAAAACTTTTTTAATccacga > 2:122935/1‑234 (MQ=255) gTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTAAATCACATTAGCGCGATTATCGCTTAACCGATGTTTACTTTCAAAAAAACACGTTTGatacaaacat > 2:579602/1‑230 (MQ=255) cTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTACTTTCAAAATAACCTGTTTGAATCACAGATTTTCATcaca > 1:669927/1‑239 (MQ=255) cTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTACTTTCAAAATAACCTGTTTGAATCACAGATTTTCATcaca > 1:616317/1‑239 (MQ=255) ttCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCTACGATTACACCCCTGTATCTTTTTACATCCCATTAGCCCGATTCACGCATAACCGATGTTTACTTTCAAAATAACCCGTTTGAATcacaacattttaacacag > 2:854235/1‑225 (MQ=255) ccaagtttCTCAAGATCGCGGCGAATGGTTTCTTCTGTTACCTGAAAATTCCCACTCAAATGTGAGACTGTCGCCTTTTGATGGTTGGCAACCATTTGGTTAATGGCCTGAATCCTGTTTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATAACATTAGCGCGATTATCGCAGAACCGATGTTTACTTTCAAAATAACCTGTTTGAATCACAGATTTTCATCACAGTTTTcac < 1:251126/233‑1 (MQ=255) ttCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGGCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTACTTTCAAAATAACCTGTTTGAATCACAGATTTTCATCACAGTTTTCACAGaaa < 2:108557/238‑1 (MQ=255) ctcAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTACTTTCAAAATAACCTGTTTGAAt > 1:308130/1‑206 (MQ=255) cgcgtgtattgttttttttgtttACTTGAAAAACCCCCCCAAAAATGGAACTTGTCCCCTTTTGTTGGTGGAAAACTATTTGTTTATTTGCCTGAACCCTGTTTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTACTTTCAAAATAACCTGGTTGAATCACAGATTTTCATTACAGTTTTCACAGAAACAGAGGTGAAt < 2:669927/218‑1 (MQ=255) ggcgAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTACTTTCAAAATAACCTGTTTGAATCACAGATTTTCATCACAGTTTTCCCAAAAACAGAGGTaaacagt > 2:194690/1‑235 (MQ=255) ggcgAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTACTTTCAAAATAACCTGTTTGAATCACAGATTTTCATCACAGTTTTCACAGAAAAAGAGGAGAATCgg > 2:716840/1‑238 (MQ=255) gattgtttttttttgTTTCCTCAAAAACCCCCCTCAAATTTGAGACTTCCCCCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTGGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTACTTTCAAAATAACCTGTTTGAATCACAGATTTTCATCACAGTTTTCACAGAAACAGAGGTGAATCGTGtt < 2:546875/225‑1 (MQ=255) gatttttttttTGGTTCCCTGAAAAATCCCCCTCAATTTGGGGACTTGCCCCTTTTTAACGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTGGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTACTTTCAAAATAACCTGTTTGAATCACAGATTTTCATCACAGTTTTCACAGAAACAGAGGTGAATCGTGtt < 2:873733/233‑1 (MQ=255) aaTGGTTTCTTCGGTTTCCTGAAAAATCCCCCCCAAATTTGGAACTTTCCCCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTACTTTCAAAATAACCTGTTTGAATCACAGATTTTCATCACAGTTTTCACAGAAACAGAGGTGAATCGTGtt < 1:423916/238‑1 (MQ=255) aaTGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTACTTTCAAAATAACCTGTTTGAATCACAGATTTTCATCACAGTTTTCACAGAAACAGAGGTGAATCGTGtt < 1:676885/238‑1 (MQ=255) aaTGGTTTCTTCGGTTAACGTAAAAATCCCACTCAAATTTGAGTCTTTCACCTTTTTTCCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGGCTTTTGCCGCCACGATTACGCCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTACTTTCAAAATAACCTGTTTGAATCACAGATTTTCATCACAGTTTTCACAGAAACAGAGGTGAATCGTGtt < 1:845189/238‑1 (MQ=255) aTGGTTTCTTCGGTTACCTGAAAAATCCCACGCAAATTTGAGCCTGTCCCCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTACTTTCAAAATAACCTGTTTGAATCACAGATTTTCATCACAGTTTTCACAGAAACAGAGGTGAATCGTGTTGa < 1:411814/239‑1 (MQ=255) tttgttttccTGAAAAATCCCACCCAAATTTGGGACTGTCCCCTTTTTGCCGGTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTACTTTCAAAACAACCTGTTTGAATCACAGATTTTCATCACAGTTTTCACAGAAACAGAGGTGAATCGTGTTGAGTATTTaa < 2:345548/231‑1 (MQ=255) ttcGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCCCCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTACTTTCAAAATAACCTGTTTGAATCACAGATTTTCATCACAGTTTTCACAGAAACAGAGGTGAATCGTGTTGAGTATTTaa < 1:122935/239‑1 (MQ=255) ttcGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCCCCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTACTTTCAAAATAACCTGTTTGAATCACAGATTTTCATCACAGTTTTCACAGAAACAGAGGTGAATCGTGTTGAGTATTTaa < 1:719095/239‑1 (MQ=255) cGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTTCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTATTTTCTAAATAACCTGTTTGAATCACCGATTTTCATCACATTTTTCACGTAAACAGAGGTGACACGAGTTGTGTTTTTAAc > 2:705794/1‑238 (MQ=255) aaaTCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTACTTTCAAAATAACCTGTTTGAATCACAGATTTTCATCACAGTTTTCACAGAAACAGAGGTGAATCGTGTTGAGTATTTAACGCTCCAGGGCctc < 1:315318/239‑1 (MQ=255) cAAATTTGGGTCTTTCCCCTTTTTTGCGTTTGCAACCATTTGCTTAATTCCCTTAAACCTGTCTTTTGCAGCCACGATTACACCCCTTTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTACTTTCAAAATAACCTGTTTGAATCACAGATTTTCATCACAGTTTTCACAGAAACAGAGGTGAATCGTGTTGAGTATTTAACGCTCCAGGGCCTCTGCCATTTcc < 2:741724/239‑1 (MQ=255) ttGGGACTGTCCCCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTACTTTCAAAATAACCTGTTTGAATCACAGATTTTCATCACAGTTTTCACAGAAACAGAGGTGAATCGTGTTGAGTATTTAACGCTCCAGGGCCTCTGCCATTTCCCtcat < 1:579602/239‑1 (MQ=255) tgggctttgcACCTTTTTACCGTTGGCACCCTTTGTCCTAATTGCCTGAATCCTTGTTTTTGCCGCCACGATTACCCCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTACTTTCAAAATAACCTGTTTGAATCACAGATTTTCATCACAGTTTTCACAGAAACAGAGGTGAATCGTGTTGAGTATTTAACGCTCCAGGGCCTCTGCCATTTCCCtcatc < 1:303848/230‑1 (MQ=255) atGTCAACTTTTTATCGCTGCCAACCATTTGATTAATTGACTGGATCCTGTCTTTTGCTGCCACGATTACACCCCTGTATCTTTTTACATCACCTTTGCGCGATTATCCCATTATCGATGGTTACTTTCATAATAACCTGTTTGAATCACAGCTTTTACTCACAGTTTTCACCGAAAAAGAGGTGGATCGCCTTGCGACTTTAAAGATGCAGGGCCTCTACCATATCCCTCAACAAttt > 2:34708/2‑237 (MQ=255) | TGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAGCTGCTTCTCTTCATAAAACGATGAAGCGCGCTTATAAAAATGGATATTCTCCGTCAACATCGCTGTATTTAAAACAGCACCACCATAGGTTCTGGTCAAAAA‑GCCTTCATCTTCCAGCTTCTCAAGATCGCGGCGAATGGTTTCTTCGGTTACCTGAAAAATCCCACTCAAATTTGAGACTGTCACCTTTTTATCGTTGGCAACCATTTGCTTAATTGCCTGAATCCTGTCTTTTGCCGCCACGATTACACCCCTGTATCTTTTTACATCACATTAGCGCGATTATCGCATAACCGATGTTTACTTTCAAAATAACCTGTTTGAATCACAGATTTTCATCACAGTTTTCACAGAAACAGAGGTGAATCGTGTTGAGTATTTAACGCTCCAGGGCCTCTGCCATTTCCCTCATCAATGT > NC_000913/1854566‑1855029 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |