Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,504,650 A→C 28.0% V299G (GTG→GGG)  ypdE ← aminopeptidase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,504,6500AC28.0% 64.7 / 6.5 48V299G (GTG→GGG) ypdEaminopeptidase
Reads supporting (aligned to +/- strand):  ref base A (22/10);  new base C (5/11);  total (27/21)
Fisher's exact test for biased strand distribution p-value = 2.91e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGAACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTAAGTTTTGGCGGCGCAATCAGCGACTTGTCGCTTAACACCAGCATCGGCCCGTTACCAATCTGGCGATGGTTAGCCGCGCCATAATCAAAGTTTTTCGCCCAGCAGG  >  NC_000913/2504412‑2504878
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                     
ttCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGGTCCGGCAATGGGCAATCGTGGCGGGGCAAGGCCCATGCCGGGTTCTCGGCCCCCTca                                                                                                                                                                                                                                       >  1:445398/1‑239 (MQ=255)
     tAAGTTCCCGCGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCACt                                                                                                                                                                                                                                  <  1:208861/239‑1 (MQ=255)
        gTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGCCGGGTTTCTGGCCCCATca                                                                                                                                                                                                                                       >  1:587382/1‑231 (MQ=255)
          tCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAACGTACGCGCCAATCGGCAATGAATGCGGCGCAATGTCCATGGCGGGTGCCTGGCCCCATACCCACTTTgg                                                                                                                                                                                                                              >  1:145574/1‑238 (MQ=255)
          tCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATTCGGCGCAATTGCCATGGCGGGTTGCTGGCCCCACCACCCCAGTgg                                                                                                                                                                                                                              >  2:876102/1‑238 (MQ=255)
          tCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGCGGCAATGTCCATGGCGGGTTGCTGGCCCCCTACCCACTTTgg                                                                                                                                                                                                                              >  1:857525/1‑238 (MQ=255)
          tCCAACTCCGGGCGAGCATGTAGACCTGTAGGCAAAGGCCACAGAAATTTAATCGGTAACTAAACCTCTCCGGGTTAAGCAGGATATTACTGGAATTCCGTCAGTTGAACAACCGTCTCACGCGTAAGACTTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAAACGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCACTGTggg                                                                                                                                                                                                                             <  2:181839/239‑1 (MQ=255)
                     acaggagtGTAGACGGTGAGGGAAAGGACAGAGAAATTGAAACGTAAACATAACCGCTCCGGGTTAATCAGGAGATCAGCTGAAATCCGTAAGTGGAACAACCGGCTCACGCGGAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGCCGCGGCAATCGGCAATCGAGGCGGGGCAAGGTCCATGGCGGGTTGCTGGCCCCATCACCACTGTGGGCACgccggtg                                                                                                                                                                                                                   <  2:223342/231‑1 (MQ=255)
                        aGCATGTAAACCGTTAGCAAAAGGACAGAAAAATTTAATCTTTAACATACCCGCTCCGGGTTAATCAGGAGATCATCGGAAAGCCGTCAGTGGAACAACCGTCTCACGCGTAAGACGTGGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCACTGTGGGCACgccggtgccg                                                                                                                                                                                                                <  2:559722/238‑1 (MQ=255)
                               aGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCCCCCCTGTGGGCACGCCGGGGCCGGTTAAgg                                                                                                                                                                                                         >  1:259271/1‑237 (MQ=255)
                               aGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCACTGTGGGCACGCCGGTGCCGGTTAAGt                                                                                                                                                                                                         >  1:523496/1‑238 (MQ=255)
                                        ggCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACGGACTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGGAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGGTGCTGGCCCCATACACACACTGGGCAACGCGGGGCCGGGTAAATGAAcagccc                                                                                                                                                                                                >  1:908688/1‑238 (MQ=255)
                                             aGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCCCCACTGTGGGCCCGCCGGTGCCGGTTAAATGCACCGCCccgccg                                                                                                                                                                                           >  1:574967/1‑238 (MQ=255)
                                             aGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCACTGTGGGCACgccggtgccg                                                                                                                                                                                                                <  2:286731/217‑1 (MQ=255)
                                             aGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCACTGTGGGCACgccggtgccg                                                                                                                                                                                                                >  1:286731/1‑217 (MQ=255)
                                                         ttGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCCCCGTCCGTGCCGCCGt                                                                                                                                                                              >  1:785333/1‑239 (MQ=255)
                                                             atggTTAACATACCCGCTCCGGTTTAATCAGGAGATCATCTGAATTCCGTCAGTTGAAAAACCGTCTCACGCGTAAAGCGTTGAAAAAGGGCAGATAAAAGTTGCGGCATCTGAAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCt                                                                                                                                                                          <  1:837398/236‑1 (MQ=255)
                                                             aTCGTAAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCt                                                                                                                                                                          <  1:664836/239‑1 (MQ=255)
                                                              tCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCACTTTGGGCACGCCGGGCCCGGTTAAGTGCACCGCCCCGCCGTCCGGGCCCCCGTTGCTg                                                                                                                                                                         >  1:758676/1‑239 (MQ=255)
                                                                gTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCCTGGCGGGGTGCGGGCCCCATCACCACt                                                                                                                                                                                                                                  >  2:206619/1‑180 (MQ=255)
                                                                gTTAACAAACCCGCTCCGGGTTAAACAGGAAATCAATTAAAATCCGTCATTTGAACAACCGTCCCCCGCGTAAGGCGTTGAATAAGGGCAAATAAAAGTTGCTGCATCTGAAAAATGTCGCGGAAATCGGCAATCGATGCGGCGCAATGTCCAGGGCGGGTTGCTGGCCCCATCCCCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGaa                                                                                                                                                                      <  2:519870/239‑1 (MQ=255)
                                                                     actAACCCCTCCGGGTTAATCAGGAGACTACTTGAAACCCGCAATTTGAACAACCTTCACACGCGAAGAACGTGGAATAGGGGCAAATAAAAGGTGCCGCATCTACAAAAGTGCGCGGCAATCGGCAATCGATGCGTCGCAATGCCCATGGCGGGTTGCGGGCCCCACCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGAACatat                                                                                                                                                                 <  2:695202/237‑1 (MQ=255)
                                                                     aataccccccccGGGTTAATCAGGAATTCATTGAAAAACCCTAAGTTGAACAACCCTCCCACGCGAAAGCGGTTGAATAAGGGCAAAAAAAGGTTGCTGAATCGCCAAAATGTCGCGCAAATCGGCAATCGAGGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCCCCACTGTGGCCCCGCCGGTGCCGTTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGAACatat                                                                                                                                                                 <  2:855027/229‑1 (MQ=255)
                                                                                       aTCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCACTGTTGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGGCCTGGCCGCCGGTGCTGGACATATCTCCCTGCAACGGCAccc                                                                                                                                               >  1:287000/1‑237 (MQ=255)
                                                                                        tCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGAACATATCTGCCTGCCACGGCACGc                                                                                                                                               >  1:649925/1‑238 (MQ=255)
                                                                                              gaTCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCACTGTGGGCACGCCGGTGCCGGGTAAGTGCACCGCCCCCCCGCCCCGGCCCCCCTTGCTGACACAATTCGCCTGCAACGGcccccccaattt                                                                                                                                        >  2:414853/1‑228 (MQ=255)
                                                                                                      gAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCCCTAGGGGCACCCCGGGGCCGGGTAAGGGCACCGCCCCCCCGTCCGTGCCGCCCGTGCTGCACAAATCCGCCTGCCACCGCCCCCCAAtttttccccccc                                                                                                                                >  2:130844/1‑230 (MQ=255)
                                                                                                      gAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGGGCCGCCCTTGCTGGAAATATCTGCCTGCAACGGCACGCCCATTTCTcccgcc                                                                                                                                 >  1:848525/1‑238 (MQ=255)
                                                                                                      gAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCACTGTGGGCACGCCGGGGCCGGTTCAGTGCCCCGCCCCGCCGTCCGTTCCGCCGTTGCTGGACATATCTGCCTGCAACGGCACGCCAATTTCTgccccc                                                                                                                                 >  1:14548/1‑238 (MQ=255)
                                                                                                      aaaaCCCGCCATTTGAACAACCCTCCCCGGCGAAAGGCGTTTAAAAAGGCAAAAAAAATGTGCTGCACTTCGAAAAAGGCGGGGGAAATGGGAAACGTTTGGGGCCCAAGTGCCTTGGCGGGTTGTGGGCCCCCCCCCCCCGGGGGGCACGCGGGTGCCGGTTAAGTTCCCCGCCCCGCCGTCCGTGCCGCCGTTGCTGAACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCa                                                                                                                                <  2:649925/238‑1 (MQ=255)
                                                                                                            cGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCACTGTGGCCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGAACAAATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACgggt                                                                                                                           >  1:861907/1‑236 (MQ=255)
                                                                                                              tCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATca                                                                                                                                                                                                                                       >  1:539682/1‑129 (MQ=255)
                                                                                                              tCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATca                                                                                                                                                                                                                                       <  2:539682/129‑1 (MQ=255)
                                                                                                                          ccGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGAACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCggca                                                                                                            >  1:246453/1‑237 (MQ=255)
                                                                                                                                       aaGACGTTGAATAAGGGCAGATAAAAGGTGCTGCATCGGCAAAATGCCGCGGCAATCGGCAACCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGAACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTAAGTTTTGgcggcg                                                                                               <  1:414853/239‑1 (MQ=255)
                                                                                                                                             ttGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGAACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCCCGGTTTCGACCCAGGCGGGAAGTTTTTGGGGCGCaacac                                                                                         >  1:729515/1‑236 (MQ=255)
                                                                                                                                             ttGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCACTGTGGGCACCCCGGTGCCGGTTAAGTGCACCGCCCCGCCGGCCGTGCCGCCGTTGCTGAACAAATCTGCCTGCAACGGCACCCCAATTTCTGCCGCCACGGGTTCGGCCCAGGCGGGAAGGTTTGGGGGGGCaaaaa                                                                                         >  2:187697/1‑236 (MQ=255)
                                                                                                                                               gAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCACTGTGGGCACGCCGGTGCCGGTTAAGGGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGAACa                                                                                                                                                                    >  1:439057/1‑162 (MQ=255)
                                                                                                                                                       gcagttaaagtgttccgcATTTGAAAAATGTGCCGGCAACCGGCAACGGGTCGGGGGCAATGCCCGTGGCGGGTGCCGGCCCCCACCCCCCCGGGGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGAACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTAAGTTTTGGCGGCGCAATCAGCGACTTGt                                                                                <  2:645488/222‑1 (MQ=255)
                                                                                                                                                          gATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGAACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTAAGGTTTGCGGGCCCAATCAGCGCCTTTTCCCt                                                                            >  1:842609/1‑239 (MQ=255)
                                                                                                                                                           aTAAAGGTTGCTGCATCTGAAAAAGGTCGCGGCAATCGGCAACCGATGCGGCGCAATGTCCAGGGCGGTTTGCTGGCCCCATCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTgccgc                                                                                                                                                                                 <  2:100103/138‑1 (MQ=255)
                                                                                                                                                               aaGTTGCTGCATCTGCAAAATGCCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCACCCCCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGAACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTa                                                                                                            <  1:851924/202‑1 (MQ=255)
                                                                                                                                                                     ctgcATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGaa                                                                                                                                                                      >  1:100103/1‑138 (MQ=255)
                                                                                                                                                                          tCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCACTGTGGGCCCGCCGGGGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGCTGCTGGAAAAATCTGCCTGCAACGGCCCCCCAATTTCTGCCGCCCCGGTTTCGACCCCAGCGGACAGGTTTGGTGGCGGAAACAGCCAcctttgccgttaacccaccaacga                                                             >  2:98876/1‑215 (MQ=255)
                                                                                                                                                                          tCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCTGCCGTCCGTGCCGCCGTTGCTGAACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTAAGTTTTGGCGGCGCAATCCGCGACTTGGCGCTTAACACCACCATCgg                                                             >  1:706832/1‑238 (MQ=255)
                                                                                                                                                                           cTGGAAACTGTCGCGGCAATCGGCAATCGAGGCGGGGCAAGGGCCAGGGCGGGTTGCTGGCCCCATCCCCACTGTGGGCCCGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGAACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTAAGTTTTGGCGGCGCAATCAGCGACTTGTCGCTTAACACCAGCATCGGcc                                                           <  1:102731/239‑1 (MQ=255)
                                                                                                                                                                              caaatggTCCCGGAAAGCGGCCATCGATGCGGGACAATGCCCTGGGCGGGTTGCGGGCCCCACCCCCGCTGGGGGCACGCCGGTGCCGGTTAAGGGCCCCGCCCCGCCGTCCGGTCCGCCGTTGCTGAACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTAAGTTTTGGCGGCGCAATCAGCGACTTGTCGCTTAACACCAGCATCGGCCCGt                                                        <  2:706832/233‑1 (MQ=255)
                                                                                                                                                                                     tCGCCGCAATCCGCTCTCGTTGCGGCGCAGTGTCCATGGCGGGTGGCTGGCCCCATCCCCCCTGTGGGCACGCGGGTGCCGGTTAAGTCCCCCGCCCCGCCGTCCGTGCCGCCGTTGCTGAACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTAAGTTTTGGCGGCGCAATCAGCGACTTGTCGCTTAACACCAGCATCGGCCCGTTACCAAt                                                 <  2:14548/239‑1 (MQ=255)
                                                                                                                                                                                                                                gTTGCTGGCCCCATCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGAACATATCTGCCTGCAACGGCCCGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTAAGTTTTGGCGGCGCAATCAGCGACTTTTCGCTTAACACCAGCATCGGCCCCTTTCCAAACTTGCGAGGGTTAGCCCCGCCCTAATCAAAATTTTTTGcccc       >  2:881437/1‑238 (MQ=255)
                                                                                                                                                                                                                                     gggCCCCATCCCCACTGGGGCCCCGCGGGTGCCGGTTAAGTGCCCCGCCCCGCCGTCCGTGCCGCCGTTGCTGAACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTAAGTTTTGGCGGCGCAATCAGCGACTTGTCGCTTAACACCAGCATCGGCCCGTTACCAATCTGGCGATGGTTAGCCGCGCCATAATCAAAGTTTTTCGCCCAGCAgg  <  1:200831/238‑1 (MQ=255)
                                                                                                                                                                                                                                      ggCCCCCTCCCCCGTGGGGGCTCGCCGGTGCCGGGTAAGGCCCCCGCCCCGGCGTCCGTGCCGCCGTTGCTGAACATTTCTGCCTGCAACGGCCCGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTAAGTTTTGGCGGCGCAATCAGCGACTTGTCGCTTAACACCAGCATCGGCCCGTTACCAATCTGGCGATGGTTAGCCGCGCCATAATCAAAGTTTTTCGCCCAGCAgg  <  1:887978/238‑1 (MQ=255)
                                                                                                                                                                                                                                      ggCCCCACTCCCCCCTGGGGGCCCGCCGGTGCCGGTTAAGTGCCCCGCCCCGCCGTCCGTGCCGCCGTTGCTGAACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTAAGTTTTGGCGGCGCAATCAGCGACTTGTCGCTTAACACCAGCATCGGCCCGTTACCAATCTGGCGATGGTTAGCCGCGCCATAATCAAAGTTTTTCGCCCAGCAgg  <  1:881437/239‑1 (MQ=255)
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                     
TTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCGATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCATCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGAACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTAAGTTTTGGCGGCGCAATCAGCGACTTGTCGCTTAACACCAGCATCGGCCCGTTACCAATCTGGCGATGGTTAGCCGCGCCATAATCAAAGTTTTTCGCCCAGCAGG  >  NC_000913/2504412‑2504878

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: