| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,504,650 | A→C | 28.0% | V299G (GTG→GGG) | ypdE ← | aminopeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,504,650 | 0 | A | C | 28.0% | 64.7 / 6.5 | 48 | V299G (GTG→GGG) | ypdE | aminopeptidase |
| Reads supporting (aligned to +/- strand): ref base A (22/10); new base C (5/11); total (27/21) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.91e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGA‑ACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTAAGTTTTGGCGGCGCAATCAGCGACTTGTCGCTTAACACCAGCATCGGCCCGTTACCAATCTGGCGATGGTTAGCCGCGCCATAATCAAAGTTTTTCGCCCAGCAGG > NC_000913/2504412‑2504878 | ttCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGGTCCGGCAATGGGCAATCG‑TGGCGGGGCAAGGCCCATGCCGGGTTCTCGGCCCCC‑Tca > 1:445398/1‑239 (MQ=255) tAAGTTCCCGCGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACt < 1:208861/239‑1 (MQ=255) gTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGCCGGGTTTCTGGCCCCA‑Tca > 1:587382/1‑231 (MQ=255) tCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAACGTACGCGCCAATCGGCAATGA‑ATGCGGCGCAATGTCCATGGCGGGTGCCTGGCCCCA‑TACCCACTTTgg > 1:145574/1‑238 (MQ=255) tCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATTCGGCGCAATTGCCATGGCGGGTTGCTGGCCCCA‑CCACCCCAGTgg > 2:876102/1‑238 (MQ=255) tCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGCGGCAATGTCCATGGCGGGTTGCTGGCCCCC‑TACCCACTTTgg > 1:857525/1‑238 (MQ=255) tCCAACTCCGGGCGAGCATGTAGACCTGTAGGCAAAGGCCACAGAAATTTAATCGGTAACTAAACCTCTCCGGGTTAAGCAGGATATTACTGGAATTCCGTCAGTTGAACAACCGTCTCACGCGTAAGACTTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAAACGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACTGTggg < 2:181839/239‑1 (MQ=255) acaggagtGTAGACGGTGAGGGAAAGGACAGAGAAATTGAAACGTAAACATAACCGCTCCGGGTTAATCAGGAGATCAGCTGAAATCCGTAAGTGGAACAACCGGCTCACGCGGAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGCCGCGGCAATCGGCAATCG‑AGGCGGGGCAAGGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACTGTGGGCACgccggtg < 2:223342/231‑1 (MQ=255) aGCATGTAAACCGTTAGCAAAAGGACAGAAAAATTTAATCTTTAACATACCCGCTCCGGGTTAATCAGGAGATCATCGGAAAGCCGTCAGTGGAACAACCGTCTCACGCGTAAGACGTGGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACTGTGGGCACgccggtgccg < 2:559722/238‑1 (MQ=255) aGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCCCCCCTGTGGGCACGCCGGGGCCGGTTAAgg > 1:259271/1‑237 (MQ=255) aGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACTGTGGGCACGCCGGTGCCGGTTAAGt > 1:523496/1‑238 (MQ=255) ggCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACGGACTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGGAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGGTGCTGGCCCCA‑TACACACACTGGGCAACGCGGGGCCGGGTAAATGAAcagccc > 1:908688/1‑238 (MQ=255) aGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCCCCACTGTGGGCCCGCCGGTGCCGGTTAAATGCACCGCCccgccg > 1:574967/1‑238 (MQ=255) aGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACTGTGGGCACgccggtgccg < 2:286731/217‑1 (MQ=255) aGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACTGTGGGCACgccggtgccg > 1:286731/1‑217 (MQ=255) ttGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCCCCGTCCGTGCCGCCGt > 1:785333/1‑239 (MQ=255) atggTTAACATACCCGCTCCGGTTTAATCAGGAGATCATCTGAATTCCGTCAGTTGAAAAACCGTCTCACGCGTAAAGCGTTGAAAAAGGGCAGATAAAAGTTGCGGCATCTGAAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCt < 1:837398/236‑1 (MQ=255) aTCGTAAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCt < 1:664836/239‑1 (MQ=255) tCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACTTTGGGCACGCCGGGCCCGGTTAAGTGCACCGCCCCGCCGTCCGGGCCCCCGTTGCTg > 1:758676/1‑239 (MQ=255) gTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCCTGGCGGGGTGCGGGCCCCA‑TCACCACt > 2:206619/1‑180 (MQ=255) gTTAACAAACCCGCTCCGGGTTAAACAGGAAATCAATTAAAATCCGTCATTTGAACAACCGTCCCCCGCGTAAGGCGTTGAATAAGGGCAAATAAAAGTTGCTGCATCTGAAAAATGTCGCGGAAATCGGCAATCG‑ATGCGGCGCAATGTCCAGGGCGGGTTGCTGGCCCCA‑TCCCCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGa‑a < 2:519870/239‑1 (MQ=255) actAACCCCTCCGGGTTAATCAGGAGACTACTTGAAACCCGCAATTTGAACAACCTTCACACGCGAAGAACGTGGAATAGGGGCAAATAAAAGGTGCCGCATCTACAAAAGTGCGCGGCAATCGGCAATCG‑ATGCGTCGCAATGCCCATGGCGGGTTGCGGGCCCCA‑CCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGA‑ACatat < 2:695202/237‑1 (MQ=255) aataccccccccGGGTTAATCAGGAATTCATTGAAAAACCCTAAGTTGAACAACCCTCCCACGCGAAAGCGGTTGAATAAGGGCAAAAAAAGGTTGCTGAATCGCCAAAATGTCGCGCAAATCGGCAATCG‑AGGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCCCCACTGTGGCCCCGCCGGTGCCGTTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGA‑ACatat < 2:855027/229‑1 (MQ=255) aTCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACTGTTGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGGCCTGGCCGCCGGTGCTGG‑ACATATCTCCCTGCAACGGCAccc > 1:287000/1‑237 (MQ=255) tCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGA‑ACATATCTGCCTGCCACGGCACGc > 1:649925/1‑238 (MQ=255) gaTCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACTGTGGGCACGCCGGTGCCGGGTAAGTGCACCGCCCCCCCGCCCCGGCCCCCCTTGCTGACACA‑ATTCGCCTGCAACGGcccccccaattt > 2:414853/1‑228 (MQ=255) gAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCCCTAGGGGCACCCCGGGGCCGGGTAAGGGCACCGCCCCCCCGTCCGTGCCGCCCGTGCTGC‑ACAAATCCGCCTGCCACCGCCCCCCAAtttttccccccc > 2:130844/1‑230 (MQ=255) gAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGGGCCGCCCTTGCTGG‑AAATATCTGCCTGCAACGGCACGCCCATTTCTcccgcc > 1:848525/1‑238 (MQ=255) gAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACTGTGGGCACGCCGGGGCCGGTTCAGTGCCCCGCCCCGCCGTCCGTTCCGCCGTTGCTGG‑ACATATCTGCCTGCAACGGCACGCCAATTTCTgccccc > 1:14548/1‑238 (MQ=255) aaaaCCCGCCATTTGAACAACCCTCCCCGGCGAAAGGCGTTTAA‑AAAGGCAAAAAAAATGTGCTGCACTTCGAAAAAGGCGGGGGAAATGGGAAACGTTTGGGGCCCAAGTGCCTTGGCGGGTTGTGGGCCCCC‑CCCCCCCGGGGGGCACGCGGGTGCCGGTTAAGTTCCCCGCCCCGCCGTCCGTGCCGCCGTTGCTGA‑ACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCa < 2:649925/238‑1 (MQ=255) cGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACTGTGGCCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGA‑ACAAATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACgggt > 1:861907/1‑236 (MQ=255) tCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑Tca > 1:539682/1‑129 (MQ=255) tCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑Tca < 2:539682/129‑1 (MQ=255) ccGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGA‑ACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCggca > 1:246453/1‑237 (MQ=255) aaGACGTTGAATAAGGGCAGATAAAAGGTGCTGCATCGGCAAAATGCCGCGGCAATCGGCAACCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGA‑ACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTAAGTTTTGgcggcg < 1:414853/239‑1 (MQ=255) ttGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGA‑ACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCCCGGTTTCGACCCAGGCGGGAAGTTTTTGGGGCGCaacac > 1:729515/1‑236 (MQ=255) ttGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACTGTGGGCACCCCGGTGCCGGTTAAGTGCACCGCCCCGCCGGCCGTGCCGCCGTTGCTGA‑ACAAATCTGCCTGCAACGGCACCCCAATTTCTGCCGCCACGGGTTCGGCCCAGGCGGGAAGGTTTGGGGGGGCaaaaa > 2:187697/1‑236 (MQ=255) gAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACTGTGGGCACGCCGGTGCCGGTTAAGGGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGA‑ACa > 1:439057/1‑162 (MQ=255) gcagttaaagtgttccgcATTTGAAAAATGTGCCGGCAACCGGCAACGG‑GTCGGGGGCAATGCCCGTGGCGGGTGCCGGCCCCCA‑CCCCCCCGGGGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGA‑ACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTAAGTTTTGGCGGCGCAATCAGCGACTTGt < 2:645488/222‑1 (MQ=255) gATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGA‑ACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTAAGGTTTGCGGGCCCAATCAGCGCCTTTTCCCt > 1:842609/1‑239 (MQ=255) aTAAAGGTTGCTGCATCTGAAAAAGGTCGCGGCAATCGGCAACCG‑ATGCGGCGCAATGTCCAGGGCGGTTTGCTGGCCCCA‑TCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTgccgc < 2:100103/138‑1 (MQ=255) aaGTTGCTGCATCTGCAAAATGCCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑CCCCCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGA‑ACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTa < 1:851924/202‑1 (MQ=255) ctgcATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGa‑a > 1:100103/1‑138 (MQ=255) tCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACTGTGGGCCCGCCGGGGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGCTGCTGG‑AAAAATCTGCCTGCAACGGCCCCCCAATTTCTGCCGCCCCGGTTTCGACCCCAGCGGACAGGTTTGGTGGCGGAAACAGCCAcctttgccgttaacccaccaacga > 2:98876/1‑215 (MQ=255) tCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCTGCCGTCCGTGCCGCCGTTGCTGA‑ACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTAAGTTTTGGCGGCGCAATCCGCGACTTGGCGCTTAACACCACCATCgg > 1:706832/1‑238 (MQ=255) cTGGAAACTGTCGCGGCAATCGGCAATCG‑AGGCGGGGCAAGGGCCAGGGCGGGTTGCTGGCCCCA‑TCCCCACTGTGGGCCCGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGA‑ACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTAAGTTTTGGCGGCGCAATCAGCGACTTGTCGCTTAACACCAGCATCGGcc < 1:102731/239‑1 (MQ=255) caaatggTCCCGGAAAGCGGCCATCG‑ATGCGGGACAATGCCCTGGGCGGGTTGCGGGCCCCA‑CCCCCGCTGGGGGCACGCCGGTGCCGGTTAAGGGCCCCGCCCCGCCGTCCGGTCCGCCGTTGCTGA‑ACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTAAGTTTTGGCGGCGCAATCAGCGACTTGTCGCTTAACACCAGCATCGGCCCGt < 2:706832/233‑1 (MQ=255) tCGCCGCAATCCGCTCTCG‑TTGCGGCGCAGTGTCCATGGCGGGTGGCTGGCCCCA‑TCCCCCCTGTGGGCACGCGGGTGCCGGTTAAGTCCCCCGCCCCGCCGTCCGTGCCGCCGTTGCTGA‑ACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTAAGTTTTGGCGGCGCAATCAGCGACTTGTCGCTTAACACCAGCATCGGCCCGTTACCAAt < 2:14548/239‑1 (MQ=255) gTTGCTGGCCCCA‑TCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGA‑ACATATCTGCCTGCAACGGCCCGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTAAGTTTTGGCGGCGCAATCAGCGACTTTTCGCTTAACACCAGCATCGGCCCCTTTCCAAACTTGCGAGGGTTAGCCCCGCCCTAATCAAAATTTTTTGcccc > 2:881437/1‑238 (MQ=255) gggCCCCA‑TCCCCACTGGGGCCCCGCGGGTGCCGGTTAAGTGCCCCGCCCCGCCGTCCGTGCCGCCGTTGCTGA‑ACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTAAGTTTTGGCGGCGCAATCAGCGACTTGTCGCTTAACACCAGCATCGGCCCGTTACCAATCTGGCGATGGTTAGCCGCGCCATAATCAAAGTTTTTCGCCCAGCAgg < 1:200831/238‑1 (MQ=255) ggCCCCC‑TCCCCCGTGGGGGCTCGCCGGTGCCGGGTAAGGCCCCCGCCCCGGCGTCCGTGCCGCCGTTGCTGA‑ACATTTCTGCCTGCAACGGCCCGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTAAGTTTTGGCGGCGCAATCAGCGACTTGTCGCTTAACACCAGCATCGGCCCGTTACCAATCTGGCGATGGTTAGCCGCGCCATAATCAAAGTTTTTCGCCCAGCAgg < 1:887978/238‑1 (MQ=255) ggCCCCACTCCCCCCTGGGGGCCCGCCGGTGCCGGTTAAGTGCCCCGCCCCGCCGTCCGTGCCGCCGTTGCTGA‑ACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTAAGTTTTGGCGGCGCAATCAGCGACTTGTCGCTTAACACCAGCATCGGCCCGTTACCAATCTGGCGATGGTTAGCCGCGCCATAATCAAAGTTTTTCGCCCAGCAgg < 1:881437/239‑1 (MQ=255) | TTCTTTAAGTTCCCACGCCGGACGAGCATGTAGACCGTTAGGCAAAGGACAGAGAAATTGAATCGTTAACATAACCGCTCCGGGTTAATCAGGAGATCATCTGAAATCCGTCAGTTGAACAACCGTCTCACGCGTAAGACGTTGAATAAGGGCAGATAAAAGTTGCTGCATCTGCAAAATGTCGCGGCAATCGGCAATCG‑ATGCGGCGCAATGTCCATGGCGGGTTGCTGGCCCCA‑TCACCACTGTGGGCACGCCGGTGCCGGTTAAGTGCACCGCCCCGCCGTCCGTGCCGCCGTTGCTGA‑ACATATCTGCCTGCAACGGCACGCCAATTTCTGCCGCCACGGTTTCGACCCAGGCGGTAAGTTTTGGCGGCGCAATCAGCGACTTGTCGCTTAACACCAGCATCGGCCCGTTACCAATCTGGCGATGGTTAGCCGCGCCATAATCAAAGTTTTTCGCCCAGCAGG > NC_000913/2504412‑2504878 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |