| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,791,436 | G→C | 13.0% | A56P (GCC→CCC) | gabD → | succinate‑semialdehyde dehydrogenase I, NADP‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,791,436 | 0 | G | C | 13.0% | 122.7 / 2.4 | 65 | A56P (GCC→CCC) | gabD | succinate‑semialdehyde dehydrogenase I, NADP‑dependent |
| Reads supporting (aligned to +/- strand): ref base G (26/28); new base C (7/3); total (33/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.05e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GAGCGGCACGTAGTGTGGATGCCTTACACGCCGCATTTAATCAATAACCTTTGAAAACAGGATGTAGCGATGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGAACAGGGTAAACCACTGGCCGAAGCGAAAGGCGAAATCAGCTACGCCGCCTCCTTTATTGAGTGGTTTGCCGAAGAAGGCAAACGCATTTATGG > NC_000913/2791202‑2791653 | gAGCGGCACGTAGTGTGGGTCCCTTACACGCCGGATTTAATCAATAACCTTTGAAAACAGGATGGAGCGATGAAACTTAACGACAGTAACTTACTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGAcgccgc < 1:882477/239‑1 (MQ=255) aTGCCTTACACGCCGCATTTAATCAATAACCTTTGAAAACAGGATGTAGCGATGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGCAAATGGGCGCGGCTGAAACCC‑GCGCCGCTATCAACCCCGCCAACCGCGCCCTGcccc > 1:858234/1‑237 (MQ=255) gCCTTACACGCCGCATTTAATCAATAACCTTTGAAAACAGGATGTAGCGATGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGCCGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGCAAATGGGCCCGGATGAAACCC‑GCCCCGCTATCGACCCCCCCAAccccccccccccccccc > 2:379881/1‑230 (MQ=255) cTTACACGCCGCATTTAATCAATAACCTTTGAAAACAGGATGTAGCGATGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCCCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCCGGCCCTCCCCCCCTg > 1:792071/1‑238 (MQ=255) ttACACGCCGCATTTAATCAATAACCTTTGAAAACAGGATGTAGCGATGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGAGCGCGGATGAAACCC‑GCCCCCCTATCGACGCCCCCAACCGCGCCCCGCCCCCCTGgc > 2:52129/1‑239 (MQ=255) ttACACGCCGCATTTAATCAATAACCTTTGAAAACAGGATGTAGCGATGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGAAGCGTGCCGAAAATGGCCGCGGATGAAACCC‑GCGCCGCTATCGACGGCGCCAACCCCGCCCCGCCCGCCGGgc > 2:780985/1‑239 (MQ=255) acacGCCGCATTTAATCAATAACCTTTGAAAACAGGATGTAGCGATGAAACTTAACGACAGCAACTTATTCCGCCAGCAGGCGTTGATTAACGAGGAATGGCTGGACGCCAACAATGGTGAAGCCATCCACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCCCCGCTATCGACCCCGCCAACCTCGCCCCGCCCCCCTGgggc > 2:642216/1‑239 (MQ=255) ccgcATTTAACCAATAACCTTTGAAAACGGGATGTAGCAAGGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCt < 1:642216/239‑1 (MQ=255) cgcATTTAATCAATAACCTTTGAAAACAGGATGTAGCGATGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGTCGAACGGCGACCAGCTGGGAAGCGTGCCGAAAAAGGCCGCGGATGAAACCC‑GCCCCCCCACCGCCCCCGCCCACGCCGCCCCGcccccccgccccccccc > 2:637933/1‑227 (MQ=255) cgcATTTAATCAATAACCTTTGAAAACAGGATGTAGCGATGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACCCCGCCAACCGCGCCCTGCCCTCCTGGCGCGCGCt > 1:267575/1‑238 (MQ=255) cgcATTTAATCAATAACCTTTGAAAACAGGATGTAGCGATGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGACGCGGCTGAAACCC‑GCGCCGCTATCCACCCCCCCACCCcccccctgcccccctgccccccgcc > 2:87687/1‑229 (MQ=255) gcATTTAATCAATAACCTTTGAAAACAGGATGTAGCGATGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCa < 1:235974/239‑1 (MQ=255) aaCCTTTGAAAACGGGTTTGGGCGATGAACATTAACGGACGTAACTTTTGCCGCCGGAGGGAGTTGATTAACGGGGAATGGCTGGACGCCAACAAGGGTGAAGCCATGGACGTCCCCAATCCGGCGAACGGCGCCAAGCTGGGTCGCGTCCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAAcg < 2:376629/239‑1 (MQ=255) ttaaaaaCAGGATGTAGGGATGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCGCCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGcca < 1:204029/236‑1 (MQ=255) ttGAAAACAGGATGTAGCGATGAAACTTAACGGCAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGcca < 1:379881/239‑1 (MQ=255) ttGAAAACAGGATGTAGCGATGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCCCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGCCGCGCGCCCACCGCCAAAGAACGCGcc > 1:553666/1‑238 (MQ=255) tGAAAACAGGATGTAGCGATGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCCCCGGGCGCGGGTTCACCGCCAAAGAACGCGccc > 1:817230/1‑237 (MQ=255) gTACCGATGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCCCCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCaa < 1:466534/239‑1 (MQ=255) cGATGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAACATGGGCGCGGATGAAACCC‑GCCCCGCTATCGACGCCGCCCACCGGGCCCTGCCCGCCGGCACCGGCCCCACCGCCAAAGACCGCGcccccctcccccccacctgg > 2:72006/1‑224 (MQ=255) gATGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTGA‑TAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCCCCATTCTGCGCAACTGGt > 1:790975/1‑238 (MQ=255) tGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCCTTCcgcgacaccggtc > 1:347547/1‑229 (MQ=255) aactttaacgcggTAACTTATTCCGCCGGCGGGCGTTGATTAAGGGGGAAGGGCTGGACTCCAAAAAGGGGGAAGCCATTGACGTCACCAATCCGGCGAACGGCGACAAGCGGGGTAGCGTGCCGAAAATGGGCCCGGATGAAACCC‑GCGCCGTTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCaa < 2:598428/226‑1 (MQ=255) cGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTtgataa > 1:814532/1‑237 (MQ=255) cAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCa < 1:31953/194‑1 (MQ=255) aaGTAACTTATTCCGCCAGCGGGGTTGGATTAAGGGGGAAGGGCTGGAGCGCAAAAGTGGGGAGGCATTCGACGTCCCCAATGCGGCGAGCGGGGACAAGGGGGGTGGCGGGCCGAAAATGGGGGCGGATGAACCCC‑GGGCCGCTACCGACGCCGCCAACCGCTCCCCGCCCGCCTGGCGCGCGCTTACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGatgatg < 2:40782/237‑1 (MQ=255) aCTTATTCCGCCAGCGGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCAt < 1:72006/239‑1 (MQ=255) aTTCCGCCAGAAGGCGTTGATAAACGGGAAATGGCGGGACGCCAAAAATTGGGAAGCCATCGACGGCACCAATCCGGCGAACGGCGACAAGCGGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAgg < 2:550581/239‑1 (MQ=255) tCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACCCCGCCAACCGCGCCCTACCCGCCTGGCCGCCGCCCACCCCCAAAGAACGCCCCACCACTCCCCGAAACCGGTTCACttacttgcaaaggaacaagaac > 2:282306/1‑219 (MQ=255) cggtgTTGATTAACGGGGAATGGCCGGCCGCCAACAAGGGGGAGGCCAGCGGCGTCACCAATCGGGCGAACGGCGACAAGCGGGGTGGCGTCCCGAAAATGGGCGCGGAGGAAACCC‑GCGCCGGTAGCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAgcg < 2:675592/235‑1 (MQ=255) agggagggtttAACGGGGAATGGGTGGACGCCAACAATGGTGAACGCCTGGACGTAACCAACCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAAGGGGCCCGGAGGAACCCC‑GCGCCGCTACCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAgcg < 2:384139/230‑1 (MQ=255) cGTTGATTAACGGGGAACGGCGGGCCGCCAACAATGGTGAAGCCATGGACACCCCCAATCCGGCAAACGGCGCCAAGCTGGGTAGCGTGCCGAAAATGGGCGCGAATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAgcg < 2:267575/236‑1 (MQ=255) aTTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCAAAAGAACCCGCCACCATTCTCCGCAACTGGTTCAATTTGATGATGGAGCATCGGGACGATTTAGCGCGCCtgat > 1:134727/1‑239 (MQ=255) ttAACGGGGAATGGCTGGACGCCAACAAGGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCtgat < 1:87687/238‑1 (MQ=255) aaTGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGAccggtc > 1:384139/1‑233 (MQ=255) aaTGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGAGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCCCACCGCCAAACAACGCGCCACCATTCTGCGCACCTGGGTCAATTTGATGACGGAGCATCAGGACGATTTTCACCGCCCGATGACCCTcta > 2:77340/1‑236 (MQ=255) ctggctggcCCCCAAAATTGGGGAAGCCATCGCGGCCCCCAATCCGGTGAACGGCGACAAGCGGGGTAGCGTGCCGAAAAGGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCTCCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGaa < 2:792071/237‑1 (MQ=255) aTGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGaa < 1:780985/238‑1 (MQ=255) aTGGCGGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAAGGGGCGCGGATGAACCCC‑GCGCCGCTATCGACGCCGCCAACCGCCCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGaa < 1:824870/238‑1 (MQ=255) aTGGCGGGACCCAAAAAAGGGGGAAGCCCCCGCAGTCAGCAAGCCGGCAGACGGCGACAAGGGGGGGAGCGGGCCGAAACTGGGCGCGGATGAAACCC‑GCGCCGCTAGCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCAGCATGCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGaa < 2:858234/238‑1 (MQ=255) gCTGGAGCCAAACAAGGTAGAAGCCAGCGACGGCACTACGCCCTGGAACCGCGACAAGTGGGGTGGCGTGACGAAAAGGGGGGGGGAGGAACCCC‑GCGCCGCTACCGACACCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGAACa < 2:660897/237‑1 (MQ=255) gCTGGACGCCAACAATGGGGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGAACa < 1:52129/237‑1 (MQ=255) cGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCACACCGCCAACGAACGCGCCACCATTCTGCGCACCTGGTTCAATTTGATGATGGACCATCAGGACGATTTAGGGCGCCTGATGCCCCTCGAACAGGGTacac > 1:437305/1‑239 (MQ=255) aacaaTGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTCCCCGCCTGGCCCGCGCTCACCGCCAAAGACCGCGCCACCATTCTGCGCCACTGGTTCAATTTGATGATGGACCATCAGGACCTTTTTGCGCGCCCGATGCCCCCCGAAAAGGGAAAACCAcc > 2:804267/1‑238 (MQ=255) acaaTGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGAACAGGGTAAACCACt > 1:80950/1‑238 (MQ=255) aaGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCTTCAGGACGATTTAGCGCGCCTGTTGACCCTCGAACAGGGTAAACCACTGGCCGCAGCg > 1:665026/1‑239 (MQ=255) aTCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCCTCAGGACGGTTTAGCGCGCCGGATGACCCCCGAAAAGGGTAAACCACTGGCCGAAGCGAAAgg > 2:117483/1‑239 (MQ=255) aTCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGAACAGGGTAAACCACGGGCCGAAGCGAAAg > 1:704955/1‑238 (MQ=255) aTCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCCCGAACAGGGTAAACCCCCGCCCCAAACGACAgg > 2:179785/1‑239 (MQ=255) cGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGAACAGGGTAAACCACTGGCCGAAGCGAAAGGCg > 1:583138/1‑239 (MQ=255) ggagccgggacaatgtggggatgCGTGCCAAAAGTGGCCGCGGAGAAAACCC‑GCGCCGTTACGGAGCCCGCGACCCGCGCCCTGCCCGCCTGGCGCGCGCCCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGAACAGGGTAAACCACTGGCCGAAGCGAAAGGCGAAATCAGCTAcgccgc < 2:80950/217‑1 (MQ=255) gcaaaCGGCGACAAGCGGGGGAGCGTGCCGAAAATGGGCGCAGAGTAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTAACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGAACAGGGTAAACCACTGGCCGAAGCGAAAGGCGAAATCAGCTAcgccgc < 1:804267/236‑1 (MQ=255) gCGACCGGGCACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTACCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGAACAGGGTAAACCACTGGCCGAAGCGAAAGGCGAAATCAGCTAcgccgc < 1:49593/239‑1 (MQ=255) gCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTACCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATCACCCTCGAACAGGGGAAACCACTCGCCGAAGCGACAGGGGAAAACaaccaagacc > 2:874539/1‑229 (MQ=255) cgcaccgccGACAAGTTGGGTGTGGTCCGAAAAATGGGCCGGGATGAAACCCGGCGCCG‑TACCGCCGCCGCCACCCCCGCCCTGCCCGCCGGGCGCCCCCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGAACAGGGTAAACCACTGGCCGAAGCGAAAGGCGAAATCAGCTAcgccgc < 2:841035/231‑1 (MQ=255) ggAACGGCCACAAGCGGGGTAGCGTGCCCAAAATGGGCGCGGATGAAACCC‑GCGCCCCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGAACAGGGTAAACCACTGGCCGAAGCGAAAGGCGAAATCAGCTAcgccgc < 1:234719/237‑1 (MQ=255) cGACCGGCGAAACGCTGGGTAGAGGGCCAAAACGGGGCGGGGAGGAAACCC‑GCGCCGTTGTGGACCCAGCCAACCCCGCCCGGCCCGCCTGGCGCGCGCTACCCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGAACAGGGTAAACCACTGGCCGAAGCGAAAGGCGAAATCAGCTAcgccgc < 2:437305/238‑1 (MQ=255) cGAAAAGCTGGGGAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGTTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGAACAGGGTAAACCACTGGCCGAAGCGAAAGGCGAAATCAGCTACGCCGCCTCCttt < 1:282306/238‑1 (MQ=255) cGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAgcg < 1:509211/151‑1 (MQ=255) cGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAgcg > 2:509211/1‑151 (MQ=255) tGCCGAAAATGGGCCCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCCCCCCCCGCCAAAGAACCGGCCACCCTTCTGCCCAACTGGTTCCATTTGAGTATGGAGCATCAGGACGCTCTAACCCGCCTGATGACCCCCGAACAGGGAAAACTACTGGCCGCAGCGTAAGGCGAAACCAGCTACCACGCCCCCttctttggggggggtgcagaa > 2:286157/1‑220 (MQ=255) gATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGCTCAATTTGATGACGGAGCATCAGGACGATTTAGCGCGCCTGATGCCCCTCGAACAGGGTATACCACTGACCGAAGCGGAAGGCGAAATCAGCTACGCCCCCTCCCTTATTTAGTGGTTGGCCAAAAAAAGGAAACGCAATTa > 2:198123/1‑239 (MQ=255) aTGAACCCC‑GCGCCGCCACGCGCCCCGCCAACCGCCCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGAACAGGGTAAACCACTGGCCGAAGCGAAAGGCGAAATCAGCTAcgccgc < 2:485835/196‑1 (MQ=255) accccggcccgttttCGACGCCCCCACCCGCGCCCTGCCCGCCTGGCGCCCGCTCACCGCCAAAGAACGCGCCACCAGTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGAACAGGGTAAACCACTGGCCGAAGCGAAAGGCGAAATCAGCTACGCCGCCTCCTGTATTGAGTGGTTTGCCGAAGAAGGCAATCGCATTTATgg < 1:278148/223‑1 (MQ=255) cgccgcTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCt < 2:57212/48‑1 (MQ=255) cgccgcTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCt > 1:57212/1‑48 (MQ=255) cgccgcTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGAACAGGGTAAACCACTGGCCGAAGCGAAAGGCGAAATCAGCTACGCCGCCTCCTTTAtt > 1:485835/1‑196 (MQ=255) | GAGCGGCACGTAGTGTGGATGCCTTACACGCCGCATTTAATCAATAACCTTTGAAAACAGGATGTAGCGATGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCC‑GCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGAACAGGGTAAACCACTGGCCGAAGCGAAAGGCGAAATCAGCTACGCCGCCTCCTTTATTGAGTGGTTTGCCGAAGAAGGCAAACGCATTTATGG > NC_000913/2791202‑2791653 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |