Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	3,289,076	C→A	14.8%	Q89K (CAG→AAG)	yraJ →	putative outer membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,289,076	0	C	A	14.8%	199.5 / 2.3	90	Q89K (CAG→AAG)	yraJ	putative outer membrane protein
Reads supporting (aligned to +/- strand):  ref base C (48/27);  new base A (5/10);  total (53/37)
Fisher's exact test for biased strand distribution p-value = 4.27e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TAAACGCACACCGAAACAGTTGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCA  >  NC_000913/3288838‑3289297                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                 tAAACGCACACCGAAACAGTTGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTcac                                                                                                                                                                                                                                  >  1:360469/1‑239 (MQ=255)      gCACACCGAAACAGTTGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCC‑CAACTACCAGGAACTTATCCGGTTGATATCTGGCTG‑AATACAAAG‑CAGGTTTCACTGaaa                                                                                                                                                                                                                             >  1:695368/1‑239 (MQ=255)          acCGAAACAGTTGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCCCAGaaaaaaa                                                                                                                                                                                                                         >  1:746939/1‑239 (MQ=255)          acCGAAACAGTTGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGaaaaaaa                                                                                                                                                                                                                         >  1:84814/1‑239 (MQ=255)                    ttGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTa                                                                                                                                                                                                              >  1:642460/1‑238 (MQ=255)                      ggCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑AAACCCCAAAAAGTGGTATGCATACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGAAATTTGGCTG‑AATAAACAC‑AAGGTTCCCCAGAAAAAAA‑T‑AAAATTTA‑cc                                                                                                                                                                                                           >  2:496653/1‑238 (MQ=255)                      ggCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑cc                                                                                                                                                                                                           >  1:31465/1‑238 (MQ=255)                      ggCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCAACGAAAAAAA‑T‑TACATTTA‑cc                                                                                                                                                                                                           >  1:887826/1‑238 (MQ=255)                        cgcTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑AAACCACAAAAAGTGGGATGCAAACAACCGAGCTGTCGCGTTTTTCAAAAAAATATGAA‑CAACTACCCGGAACTTTTCAGGTTGATTTCTGGCTG‑AATAAAAGA‑AAGGTTTTACAGAAAAAAA‑T‑TACATTTA‑CCGcc                                                                                                                                                                                                        >  2:816046/1‑239 (MQ=255)                            catcatcaAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑CAACCACAAAAAGGGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTTAAAGAAAAAAA‑T‑TAAATTTA‑CCCCCAATg                                                                                                                                                                                                    >  2:669433/1‑239 (MQ=255)                            catcatcaAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑AGACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCACACAAATATGCA‑CAACTACCAGGAACTTATCAGAGTACTATCTGGCTG‑AATAAAAAA‑AAGGTTTCACCAAAAAAAA‑T‑TACATTAA‑CCCCCATTg                                                                                                                                                                                                    >  1:419849/1‑239 (MQ=255)                                               ccGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAACAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAAAGCAACTTCTCAAGcc                                                                                                                                                                                 >  2:737173/1‑239 (MQ=255)                                                cGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCCCAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGcac                                                                                                                                                                                >  1:454768/1‑237 (MQ=255)                                                 ggtgtgtacacatggacggggCATCTTTTGCCATACCCCAAACGAAGAAGTGTATT‑TTTCGCCCCCAATTTTCTGGAAAACCAAAAAAAGGGTTAACAAAACAACCGATCGTGCGGTTTTTGCAAAAAAATACGCA‑AAACTCCCAGGAATTTATAAGGTTGATATCGGGTTA‑AAAAAAAAG‑AAGGTTACACAGAAAAAAA‑T‑TACTTTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCca                                                                                                                                                                                <  2:360469/219‑1 (MQ=255)                                                 gATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑AAACCACAAAAAGTGGGATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGGTTAAAAGAAAAAAA‑T‑TACATTTA‑CCCCCAATGAAGAACAAATTTTGCAGCcac                                                                                                                                                                               >  2:63291/1‑239 (MQ=255)                                                  aTGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTCCAGCccca                                                                                                                                                                              >  1:7549/1‑239 (MQ=255)                                                  aTGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑AAACCACAAAAAGTGGTATGCAAACAACCGAACGGTCGCGTTTTTCAAACAAATATGCA‑CAACTCCCAGGGACTTATCAGGTTGATATCTGACTA‑AATAAAAAA‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCCCCAATGCCAAACAACtttgcaagcaaca                                                                                                                                                                              >  2:767626/1‑228 (MQ=255)                                                     gTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCAAAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACCGtt                                                                                                                                                                           >  1:240014/1‑239 (MQ=255)                                                      tGCACACTGGCAGGGGCATGCTTTACACCACCGATAACGCAGAAGAGTATTATTTCGACCCTATTATGCTGA‑AAACCAAAAAAAGGGGTATGCAACAAACCGATCTGTCGCGTTTTTAAAAAAAATATGAA‑CAACTCCCAGGAACTTACCAGTTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTCCACAGAAAAAAA‑T‑TACTTTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGtt                                                                                                                                                                           <  1:727198/238‑1 (MQ=255)                                                        cccACTGGCAGGGGCATGCTTTGCACTACCTCAAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑AAACCACAAAAAGTGTTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTa                                                                                                                                                                         <  1:129334/236‑1 (MQ=255)                                                          accgggCAGCGGCAGTCTTTCCATTACCGCTAACGCCGAGGGGTATTATTTCGACCCAATTAGGCTGA‑AAACCAAAAAAAGGGTTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCAG‑AATAAAAAG‑AAGGTTTCACAAAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACgg                                                                                                                                                                      <  1:92032/235‑1 (MQ=255)                                                                cAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGaac                                                                                                                                                                >  1:507232/1‑239 (MQ=255)                                                                  gCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGaacaa                                                                                                                                                              >  1:608085/1‑239 (MQ=255)                                                                           ttttcacaccccatAACGCCGAAGATTATTATTTCCCCCCAATTATGCTGG‑AAACCAAAAAAAGTGGAATGCAAAAACCATATCTGTCGAGTTTTTCAAAAAAAAATGCA‑AAACTACCAGGAATTTAACAGTTTGATATCTGGCTA‑AATAAAAAG‑AAGTTTTCAAAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAg                                                                                                                                                     <  2:31465/226‑1 (MQ=255)                                                                             tgcccccccggaaaCGCCAAAGATTATTATTAGGACCACATTATGCTGG‑AAACCAAAAAAAGGGGAATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTACCAGGTTGATTTCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCt                                                                                                                                                   <  1:849072/227‑1 (MQ=255)                                                                             tccaatACCGCGAACGCCGAAGGGTATTATTTCGCCCCCATTATCGTGG‑AAACAACAAAAAGTGGTATGAAAACAACCGATCTGTCGCTTTTTTAAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCt                                                                                                                                                   <  1:669433/234‑1 (MQ=255)                                                                             tGCCCTCCCGCAAACGCAGAGGAGTTTTTTTCCGCCCCCTTTTTGCAGG‑AACCCAAAAAAAGTGGTAGCAAAACAACCGATCGGTCGCTTTTTCAAAAAAAATATGCA‑CACCTACAAGAATCTTATCAGGTTGATATCTGGCTA‑AATAAAAAG‑AGGTTTTCACAGAAAAAAT‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCt                                                                                                                                                   <  2:72463/239‑1 (MQ=255)                                                                             tGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGAAACTTCTGCAGCCACCGTTTACGGTAGAACAACTACGTGa                                                                                                                                                      >  1:725886/1‑236 (MQ=255)                                                                                    ccgaaaaCGCCAAAAATTATTATTCCGCCCCCATTATGCTGG‑AACCCAAAAAAAGGGGTATGCAAACAACCGATCGGTCGCTTTTTTAAAAAAAATATGCA‑CAACTACCAGGAACTTATAAGGTTGATATCTGGCTG‑AAAAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTAtt                                                                                                                                            <  1:803210/234‑1 (MQ=255)                                                                                    ccGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑Ta                                                                                                                                                                                                                    <  1:895219/168‑1 (MQ=255)                                                                                    ccGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑Ta                                                                                                                                                                                                                    >  2:895219/1‑168 (MQ=255)                                                                                     cGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCACCTTCTGAAGCCACAGTTTACGGAAGAAAAACAACggaagaggggaataa                                                                                                                                           >  2:474013/1‑225 (MQ=255)                                                                                     cGCTAACGCCGAAGAGTATTATTTCCACCCCATGATGTTGG‑AACCCAAAAAAAGTGGTATGCAAACACCGGATCTGTCGCTTTTTAAAAAAAAAAATCCA‑AAATTCCCAGGAATTTATCAGGTTGATAACTGGATG‑AACAAAAAG‑AAGGTTGCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTa                                                                                                                                           <  1:63291/239‑1 (MQ=255)                                                                                         aaCGCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAATTTACGGTAGAACAACTACCAGAGCTGGGTATTAAgag                                                                                                                                       >  2:393658/1‑237 (MQ=255)                                                                                            gCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGa                                                                                                                                    >  1:815060/1‑239 (MQ=255)                                                                                                         attTCGACCCAATTATGCTGG‑AAACCAAAAAAAGTGGTATGCAAAAAACCGATCTGTCGCTTTTTTAAAAAAAATATGCA‑CAACTACCAGGAACTTAACAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGgcg                                                                                                                       <  1:323207/239‑1 (MQ=255)                                                                                                             cGACCCCATTATGCTGG‑AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAAAAACAAAGTGAGCTGGGTATTAAGGTGGATGAAAACCCGGGgctgg                                                                                                                   >  2:602152/1‑239 (MQ=255)                                                                                                               aCCCCATTATGCTGG‑AAACCACAAAAAGTGGTATGCAAACAATCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCAAAGAAAAAAA‑T‑TACATTTA‑CCGCCCATGCAGAGCAACTTCTGCAGCCACCGTTTACGGTAGACAAACAACGTGACCTGGGTATTAAGGTGGATGAAAACACGGCcctggct                                                                                                                 >  2:2864/1‑239 (MQ=255)                                                                                                               aCCCCATTATGCTGG‑AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGACCAACTCCGTGAGCTGGGTATTAAGGTGGGAGAAATCCCGGCcctggct                                                                                                                 >  2:79700/1‑239 (MQ=255)                                                                                                               aCCCCATTATGCTGG‑AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCgctggct                                                                                                                 >  1:109754/1‑239 (MQ=255)                                                                                                               aCCCCATTATGCTGG‑AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGAATTAAGGGGGAAGAAATCCCGGCgcggggg                                                                                                                 >  2:323207/1‑237 (MQ=255)                                                                                                                   atttATGTTGG‑AACCCAAAAAAAGGGGAAAGAAAACCACCGGTTGGTGGTGTTTTGAAAAAAAATAAGCA‑AAATCAACAGGAATTTACACGGTTAAT‑TCCGGGTGAAAAAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGaaa                                                                                                             <  2:84814/237‑1 (MQ=255)                                                                                                                             g‑AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCCGCCAAAGTTTACGGTAGAACAACTACGCGAGCTGGGTCTTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATgcagg                                                                                                   >  2:207192/1‑235 (MQ=255)                                                                                                                                 aCCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATGTCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGCATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGGTAg                                                                                                >  1:277647/1‑239 (MQ=255)                                                                                                                                  ccAAAAAAAGTGGTACGAAAACAACCGATCTGTCGCGTTTTACAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGc                                                                                               <  1:474013/239‑1 (MQ=255)                                                                                                                                            gggTAAGAAAACAACCGATCTGTCGCTTTTTAAAAAAAAATATGCA‑CAACTCCCAGAAACTAATCAGTTTGATATCTGGCTG‑AAAAAAAAG‑AAGGTTTCACAAAAAAAAA‑T‑TCCATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCaa                                                                                       <  1:79700/236‑1 (MQ=255)                                                                                                                                             ggTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACt                                                                                     >  1:803797/1‑238 (MQ=255)                                                                                                                                               tatccaacaaacCGAT‑TGTCTGGTTTTTAAAAAAAAAAAGCACCAACAACAAGAAACTAACAAGGTTGATATCGGCGTA‑AAAAAAAAG‑AAGGTTCCACAAAAAAAAA‑T‑TCAATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGc                                                                                  <  2:815060/230‑1 (MQ=255)                                                                                                                                                 tGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAg                                                                                                                                                     >  1:802322/1‑170 (MQ=255)                                                                                                                                                      acaacCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCCATGGAACa                                                                           >  1:829329/1‑239 (MQ=255)                                                                                                                                                             aTCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCAt                                                                     >  1:33669/1‑238 (MQ=255)                                                                                                                                                             aTCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCAt                                                                     >  1:847340/1‑238 (MQ=255)                                                                                                                                                             aTCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCAt                                                                     >  1:468279/1‑238 (MQ=255)                                                                                                                                                             aTCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCAt                                                                     >  1:652862/1‑238 (MQ=255)                                                                                                                                                                    gcgTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACTGTAGAACAACTACGTCAGCTGGGCATTAAGAGGGATGAAATCCCGGCACTGCCTGAAAAAGATGAGGATACCTGGTTCAAACCGCTTGAAAAAATAATTCCgggaa                                                             >  2:904017/1‑237 (MQ=255)                                                                                                                                                                    gcgTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACTACTACGTGAGCTGGGCATTAAGGTGGATGAAATCCCGGCGCTGGCTGAACAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGt                                                              >  1:721879/1‑238 (MQ=255)                                                                                                                                                                       tttttCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGAAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGCAAAAGATGACGATAGCGTGATCAACTCGCTTGACCAAATAATTCCCGGTAcc                                                           >  1:757459/1‑237 (MQ=255)                                                                                                                                                                                        caacaccgaCCAGGATTTTAACAGTTTGATATCGGGCTA‑AAAAAAAAA‑AAGTTTCCACAAAAAAAAA‑T‑TACTTTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGAttt                                          <  1:582508/231‑1 (MQ=255)                                                                                                                                                                                                 ccAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTCCAgctgct                                                     >  1:587695/1‑219 (MQ=255)                                                                                                                                                                                                   aaaaatttATCGGGTTATTCTTTGGTTA‑AAAAAAAAG‑AAGTTTCCAAAAAAAAAAT‑T‑TACATTAC‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGc                               <  2:803797/233‑1 (MQ=255)                                                                                                                                                                                                       aCTTATCTTGTTGATTTTTGGATA‑AATAAAAAG‑AAGTTTTCACAAAAAAAAA‑T‑TACATTTC‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAAc                            <  2:652862/238‑1 (MQ=255)                                                                                                                                                                                                        cTTATCAGGTTGATATCTGGCTG‑AATAACAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGAAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTCAAGCTACTGAATTTGATTTCAatcacacgcaaata                          >  2:432576/1‑229 (MQ=255)                                                                                                                                                                                                           aTCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAAt                       >  1:478385/1‑239 (MQ=255)                                                                                                                                                                                                                gTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAg                                                                                                                                         >  1:160916/1‑120 (MQ=255)                                                                                                                                                                                                                gTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCATTCATCAGCAACTTAAtttag                   >  1:375309/1‑236 (MQ=255)                                                                                                                                                                                                                gTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGa                   >  1:683185/1‑238 (MQ=255)                                                                                                                                                                                                                   gATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCa                >  1:86422/1‑238 (MQ=255)                                                                                                                                                                                                                   gATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCAt               >  1:778003/1‑239 (MQ=255)                                                                                                                                                                                                                   gATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGAATTAAGGTGGATGACATCCCGGCGCTGGCTGAAAAAGATGACGATAGAGTGATCAACTAGCTTGCACAACTCAGTCCCGGTAAAGTCGGTGCATTTGATTTCAATACACAGCAACTAAATTTTAGCa                >  2:287358/1‑238 (MQ=255)                                                                                                                                                                                                                     ttctgtggacaaaaaaaaaG‑AATTTTCCAAAAAAAAAAT‑T‑TAATTTGA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCAtt              <  2:757459/225‑1 (MQ=255)                                                                                                                                                                                                                      atagggCTA‑AAAAAAAAG‑AAGGTTACAAAAAAAAAAA‑T‑TACATTTA‑CCGGCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTcc            <  1:755998/235‑1 (MQ=255)                                                                                                                                                                                                                       tttgggttaaaaaaaaaG‑AAGTTTCCAAAAAAAAAAA‑T‑TAACTTAA‑CCGCCAATGCAGAGCAACGTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTTGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATCTCAATCATCAGCAACTTAATTTGAGCATTcc            <  2:468279/227‑1 (MQ=255)                                                                                                                                                                                                                          ggCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAC‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGACACAGTTTACGGTAGACCAACTACGTGAGCTGGGTATTAAGGTGGATGAAATACCGGCGCTGGCTGAAAAAGATGACGATAGCTAGATAAACTCGCTTGAACAAATAATTCCCGGTCCAGCAGCTGAATTTGATTTCAATCACAAGAAACTTAATTTTGGCA‑TCCCCaaa       >  2:631921/1‑239 (MQ=255)                                                                                                                                                                                                                           gCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCaaa       >  1:436527/1‑239 (MQ=255)                                                                                                                                                                                                                            tgaaaaaaaaaaG‑ATGGTTTAAAAAAAAAAAT‑T‑TATATTTA‑ACGGCAATGCAGGGCAAATTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCaaa       <  2:847340/232‑1 (MQ=255)                                                                                                                                                                                                                            cTG‑AAAAAAAGG‑AATGTTCAAAAGAAAAAAT‑T‑TACGTTAA‑CCGCCAATGCAGAGCAACTTCTGCGGCCACAGTTTACGGTAGAACAACTACGTGAGTTGGGTATTAAGGTGGATGAAATCTCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAAATCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCaaa       <  2:628229/238‑1 (MQ=255)                                                                                                                                                                                                                              ttaaagaaagtgagtgTTTCACAAATAAAAA‑T‑TATTTGAC‑CCGCCGATGCAGAGCAACTTGTGCAGCTACATTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCaaa       <  1:496653/223‑1 (MQ=255)                                                                                                                                                                                                                              g‑AATAAAAAG‑AGGGTTTCAAAAAAAAAAA‑T‑TACCTTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAATTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTg    <  1:820279/239‑1 (MQ=255)                                                                                                                                                                                                                               aaagaaaaaG‑AAGTTTCCACAAAAAAATA‑T‑TTCTTATC‑CCGCCAAGGCAGAGCAACTTCTGCAGCCACGGGTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTg    <  1:615244/235‑1 (MQ=255)                                                                                                                                                                                                                                aaTAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGc   >  1:544169/1‑239 (MQ=255)                                                                                                                                                                                                                                aaTAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCAACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACCAATCATTCCCGGTACAGACGATGAATTTAGTTTCAATCATCGCCAACTTAATTTGAACATTCCCCAAAATGc   >  2:108294/1‑239 (MQ=255)                                                                                                                                                                                                                                 aaaaaaaG‑AGGTTTTCACAAAAAAAAA‑T‑TCCATTTC‑CCGCCCATTAAGAGCAACTTCTGCAGCCACTGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCa  <  2:19351/237‑1 (MQ=255)                                                                                                                                                                                                                                 aaaaaaaG‑AGGTTCACACAAAAAAAAT‑T‑TAATTTTC‑CCGCCAATGCAGAGCAAATGCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTTAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCa  <  2:829329/237‑1 (MQ=255)                                                                                                                                                                                                                                 aaaaaaaG‑AATGTTTCACGAAAAAAAA‑T‑TATTTTTC‑CCGTCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCTGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCa  <  1:108294/237‑1 (MQ=255)                                                                                                                                                                                                                                 aaaaaaaG‑AAGGTTTCAAAGAAAAAAA‑T‑ACCATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAAtc     <  1:816046/234‑2 (MQ=255)                                                                                                                                                                                                                                 aTAAAAAG‑AAGGTTTCACAAAAAAAAA‑T‑TTCTTTTA‑CCGCCAAGGCAGGGCAACTGCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAAGCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCa  <  2:109754/239‑1 (MQ=255)                                                                                                                                                                                                                                 aTAAAAAG‑AAGGTTGCACAGAAAAAAA‑T‑TACACTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGGTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCa  <  1:631921/239‑1 (MQ=255)                                                                                                                                                                                                                                 aTAAAAAA‑AAGTTTACCAAAAAAAAAA‑T‑TCCATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCTCAGTTGACGGTAGAACAACTACGTGAGCTGGGGATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCa  <  1:207192/239‑1 (MQ=255)                                                                                                                                                                                                                                  aaaaaaa‑aaATTTTCACAAAAAAAAA‑A‑TTCTTATACCCGCCAATGGAGGGCAACTGCTGCAGCCACAGTTTACGGGAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCa  <  2:33669/238‑1 (MQ=255)                                                                                                                                                                                                                                  aaaaaaGAAAGGTTTC‑CAAAAAAAAA‑TGTACATTGA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCa  <  1:2864/238‑1 (MQ=255)                                                                                                                                                                                                                                  aaaaaaG‑AAAGTTTTACAAAAAAAAATT‑TGCAGTCA‑CCGCCAATGGAGAGCAAATTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCa  <  2:603016/238‑1 (MQ=255)                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                 TAAACGCACACCGAAACAGTTGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGG‑AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCA‑CAACTACCAGGAACTTATCAGGTTGATATCTGGCTG‑AATAAAAAG‑AAGGTTTCACAGAAAAAAA‑T‑TACATTTA‑CCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCA  >  NC_000913/3288838‑3289297

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑