| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,489,860 | A→G | 21.9% | S107P (TCC→CCC) | argD ← | bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,489,860 | 0 | A | G | 21.9% | 137.1 / 4.5 | 68 | S107P (TCC→CCC) | argD | bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase |
| Reads supporting (aligned to +/- strand): ref base A (14/36); new base G (15/2); total (30/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.55e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCATTGGTGAAAACGTTACTGATATGCCACAGAGTTTCGCCCT‑GGGTTTTTAACGCGTTCACCAGCGCAGGA‑TGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCC‑TTGCCTTGCTGATCCCAGATTCGGCTGCCCT > NC_000913/3489623‑3490084 | gATCATCCATCACCGCTTTCCATGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAg < 1:515716/239‑1 (MQ=255) atccatcACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCCTTTGCTT‑TC‑CGGCCGGAGtcat > 1:278595/1‑236 (MQ=255) ccatcACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑GTTTGTTAGCTT‑CC‑GTGCCGGAGTT‑CCTa > 1:498884/1‑239 (MQ=255) ccatcACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑GTTCGTTAGCTT‑CC‑GTGCCGGGGGT‑CATa > 1:45986/1‑239 (MQ=255) catcACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGTCCACCCACCGAACCGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCATGCCAGTTTAAAGGCGG‑TTTCGTTAGGTT‑CC‑CGGCCGGaaggtagaa > 2:622752/1‑231 (MQ=255) catcACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGATT‑CC‑CGGCCGGAGTG‑CCTaa > 1:360073/1‑239 (MQ=255) tcccccccTTTCCCTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATaaa < 2:328033/232‑1 (MQ=255) aCCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTTGTTTTGAACGGGCTATGACGACCACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTGCGTAGATT‑CC‑ATCCCCGGGTTCCATAAac > 1:916056/1‑238 (MQ=255) cctctttcctgcgaTGGAGATCGTTAAAGGGAACGGGGATGAGGCCTGCCGGTTCCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAAca‑c‑c < 2:632608/226‑1 (MQ=255) cTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GGGCCGGGGTT‑CTTAAAca‑c‑cac > 1:132972/1‑238 (MQ=255) gCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGACCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCAACCAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAACTT‑CCGGTGCCGGGGTC‑AATAAACC‑C‑CCcggttacgg > 1:880530/1‑232 (MQ=255) cATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTCAGTTT‑CC‑GTGCCCGAGTT‑CATAAa‑a‑c‑cacaccgttctgac > 1:118516/1‑228 (MQ=255) agaTCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTTGTTAGCTT‑TC‑CTGCCGGGGTT‑CATAAACA‑C‑CCCCCGTTCGGCAAAcct > 1:638912/1‑237 (MQ=255) gaTTGTTAAAGGTGACGTGGATGATGTGTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTGGGCTGCCCACCCCACGAAACGGTAAACCAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTGTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACg < 1:251518/238‑1 (MQ=255) gTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGCTTTCG‑TAGCTT‑CC‑CTGCCGGGGGT‑CACAAAca‑c‑caacccgtcgggaaacagtggc > 2:279403/1‑218 (MQ=255) gTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTTGGTAACTT‑CC‑GTGCCGGGGTT‑CCTAAAAA‑C‑CCACCGTTCGGCAAACGTTgtc > 1:283433/1‑236 (MQ=255) gTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTTGCTTCCC‑GTCCCGG‑GTT‑CCTAAAAA‑A‑CACCCGTTCGGCAAACGGTGcc > 1:785043/1‑238 (MQ=255) aaGGGAACGGGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑At < 1:622752/239‑1 (MQ=255) aaCGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CCTAAAAA‑C‑CACCCGTTCGGCAAACCTTGCCTCA‑Atacgtt > 1:544857/1‑234 (MQ=255) aaCGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TGTCGCTTTCTT‑TC‑GGGCCCGGGTT‑TATAAACA‑CACAC‑CGTTTGGCAAACGTTTcccccaacaagt > 2:702750/1‑229 (MQ=255) aaCGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑GTTTGGTAGATT‑TC‑CGGCCGGGGTT‑CATAAAAC‑C‑CACTGGGTCGGCAAACGTTGCCTCC‑ATAAGtt > 1:616463/1‑239 (MQ=255) aaCGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑GTTCGTTAGCTT‑CC‑GTGCCGGAGGT‑CATAAACA‑C‑CACGCGGTCGGCAAACGTTGTCTCA‑ATCAggt > 1:543868/1‑237 (MQ=255) aaCGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑CTTCTTTTGCCT‑CC‑GGTCCCGGGGT‑CATAACAA‑C‑AACCCGTGTGGCCAACGGTGACTCa‑aacc > 2:126879/1‑233 (MQ=255) cGTTGATGATGTCTGCCGGTTGCGGCCCAAAGCCGTCGGAATATTGTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTa < 1:265070/239‑1 (MQ=255) cGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTG‑CCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCCAACAGGCGTAATGGCGTGCCAGTTTAAAAGCGG‑GTTTGCTTGCTTCCC‑GTCCCGGGGTT‑‑AAAAAAA‑C‑CACGCGGTCGTCCAACGTTTGCTCACACCAGttt > 1:882237/1‑238 (MQ=255) gTGGGTGATGTGTGCCGTTTTCGGCCCAAAGCCGGTGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTAc < 2:482279/239‑1 (MQ=255) atgTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑TC‑GTGCCGGGGTT‑CATAAACA‑C‑AACGCGTTCGGCAAACGTTGCCTCC‑ATCCGTTTTCGccccaa > 1:131724/1‑236 (MQ=255) ccGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑TGGCCGGAGTT‑CATAAACA‑C‑CACGCGTTTGGCAAACGTTGCCCCC‑ACCAGTTTACGCCCCACACGCac > 1:881255/1‑237 (MQ=255) ccAACGCCGTCGGATTATTTTGGCGTCCCACCCGCCGAAAGGGTAAA‑AAGCGAGCGAACATGAAAAGCGTTATGGAAGGCAATAAGTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCAtt < 2:715732/239‑1 (MQ=255) ccAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCAt < 1:48944/238‑1 (MQ=255) aaGCCGTGGGAATATTTTGGGTGCCCACCCCCCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCATTGGt < 2:881255/239‑1 (MQ=255) cccGGCGGAATTTTTTGGCCGCCCCCCCACCGAAACGGTAAA‑CAGGGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCATTGGTGa < 2:132972/238‑1 (MQ=255) cggaggAATATGTTGGCTGCCCCCCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCATTGGTGa < 1:126879/233‑1 (MQ=255) cGTCGGAATTTTTTGGCCGCCCACCCAACGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCATTGGTGaa < 2:283433/238‑1 (MQ=255) cGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCATTGGTGaaa < 1:143149/239‑1 (MQ=255) ggcGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCATTGGTGaaaa < 1:279403/237‑1 (MQ=255) gTCGGAATTTTTTGGCTGCCCACCCCCCGAAACGGTAAA‑AAGCGAGCGACCATGAAAAGGTTTAAGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCATTGGTGaa < 2:785043/237‑1 (MQ=255) tttttGGCCGCCCCCCCACCGAAACGGTAAA‑CAGCGAGCGACCAGGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCATTGGTGAAAACGTTACTg < 2:544857/238‑1 (MQ=255) ttGGCCGCCCCCCCACCGAAACGGTAAA‑CAGCGGGCGACCATGAAAGGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCATTGGTGAAAACGTTACTGata < 2:278595/239‑1 (MQ=255) cccacccaCCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCATTGGTGAAAACGTTACTGATATGCcaca < 1:823203/239‑1 (MQ=255) ccgcccgcggagaCGGGAAA‑CAGCGGGGGCCCATGAAAAGGGTTAGGGAAGGCAATAAGTTTGGTTTGGAAAGGGATATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCTCCGGTTCATTGGTGAAAACGTTACTGATATGCaaca < 2:326347/226‑1 (MQ=255) ccccccaacGAAACGGTAAG‑AAGCGATGGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCATTGGTGAAAACGTTACTGATATGCcaca < 1:369613/235‑1 (MQ=255) aaaCGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCATTGGTGAAAACGTTACTGATATGCCACAGAGTTTCGccc < 2:716294/239‑1 (MQ=255) ggTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTTGCTT‑CC‑GTGCCGCAGTT‑CGTAAAAC‑C‑CCCCCGCTCGGCAAACGTTGCCTCA‑CTCAGTTTAGCCCCAAGACCCACAGCCGGTTCCATTGTGCAAAAGTCACTGATAAGcacccacaactacccccggg > 2:408246/1‑220 (MQ=255) ggTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGGTCGGCAAACGTTGCCTCA‑ATCAGGTTACGCCCAAGACGCAGCGCCGGTTCATTGGTGAAAACGTTACTGGTATGCCCCAGAGTTTCGCCCC‑ggg > 1:223783/1‑239 (MQ=255) gagcgaCCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGGTTACGCCCAAGACGCAGCGCCGGGTCATTGGTGAAAACGTTACTGATATGCCACAGAGTTTCGCCCTGGGGTTTTTaagc > 1:80305/1‑237 (MQ=255) gcgaCCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCATTGGTGAAAACGTTACTGATATGCCACAGAGTTTCGCCCT‑GGGTTTTTAAcgcg < 1:702750/238‑1 (MQ=255) tGAAAAGCGTTATGGAAGGCAATAATTCTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCATTGGTGaa < 1:503054/185‑1 (MQ=255) ggTTAGGGAAGGCAATAATTTTGGTTTTGAACGGGCTATTACGCCCACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCATTGGTGAAAACGTTACTGATATGCCACAGAGTTTCGCCCT‑GGGTTTTTAACGCGTTCACCAGCGCAGGa < 1:284918/238‑1 (MQ=255) ttttGGAAGGCAATAATTTTGGGTTTGAACGGGTTTTGACGCACCCAGGCGTAAGGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCATTGGTGAAAACGTTACTGATATGCCACAGAGTTTCGCCCT‑GGGTTTTTAACGCGTTCACCAGCGCAGGA‑t < 2:638912/235‑1 (MQ=255) attatTTTGGTTTTGAACGGGTTTGGGCCCACAAGGGCGTAATGGCGTGCCAGTTTAAAGGGGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACC‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCATTGGTGAAAACGCTACTGATATGCCACAGAGTTTCGCCCT‑GGGTTTTTAACGCGTTCACCAGCGCAGGA‑TGGCAATGGCCCaa < 2:360073/236‑1 (MQ=255) tgatttgtgTTTTGAACGGTCTATGACGCACCCGGGCGTACGGGGCTGCCAGTTTAAGGTCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACC‑C‑CGCGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTCCCGCCCAAGACGCCTCGCCGGTTCATTGGTGAAAACGTTACTGATATGCCACAGAGTTTCGCCCT‑GGGTTTTTAACGCGTTCACCAGCGCAGGA‑TGGCAATGGCCAAAc < 2:157509/231‑1 (MQ=255) gCACCCAGGCGTATTGGGGTGACAGTTTAAAGGGTG‑TTTACTTAGCTT‑CC‑GGGCCGGGGTT‑CATAAACC‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCATTGGTGAAAACGTTACTGATATGCCACAGAGTTTCGCCCT‑GGGTTTTTAACGCGTTCACCAGCGCAGGA‑TGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGaaa < 2:45986/239‑1 (MQ=255) ccaccgggggttaTGGCGTTCCAGTTTAAAGGCGG‑TTTCTTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACC‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCATTGGTGAAAACGTTACTGATATGCCACAGAGTTTCGCCCT‑GGGTTTTTAACGCGTTCACCAGCGCAGGA‑TGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAAt < 2:118516/227‑1 (MQ=255) cacacaGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCATTGGTGAAAACGTTACTGATATGCCACAGAGTTTCGCCCT‑GGGTTTTTAACGCGTTCACCAGCGCAGGA‑TGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAAt < 1:131272/239‑1 (MQ=255) acacaGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATa < 2:442508/63‑1 (MQ=255) acacaGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATa > 1:442508/1‑63 (MQ=255) acacaGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑GTTCGTTAGCTT‑CC‑GTGCCCGGGTT‑CATAAACA‑A‑CACCCGGTCCGCAAACCTTGCCTCA‑ATCAGTTTACGCCCCAGACGCAGCCACGGGTCATTGGGGAAAACGTTACTAAAATGCCACAAGGATTCGCCCT‑GGGTTTTTAAAGCGTTCACACCCCCCGGA‑ACGGAAAGGCCCCACCCCGTACATCCAATGCCAccccccgaaac > 2:518889/1‑231 (MQ=255) aGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGGGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGGTTACGCCCAAGACCCCGCGCCGGGTCATTGGTGAAAACGTTACTGATATTCCACAGAGGTTCGCCCT‑GGGGTTTTAAAGCGTTCACCCACCCCGGG‑TGGCAAAGGCCCCACCCCCTAAATACAATGACACCCCCGCAAACGACa > 2:118276/1‑239 (MQ=255) gCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGGGTT‑CATAAACA‑C‑CCCGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCACCGCCGGTTCATTGGGGAAAACGTTACTGATATGCCCCCGAGTTTTGCCCT‑GGGGTTTTAAACGGTTCACCCGCGCCGGAGTGGCAAT‑GCCCCACACCGTAAATGCAAAGcccccccccgaaactcaaaa > 2:379547/1‑225 (MQ=255) tAATGGCGTGCCAGTTTAAAGGCGT‑TTTCCTTAGGTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGGGTTCGGCAAACGTTGCCTCA‑ATCAGGTTACGCCCAAGCCGCAGCGCCGGTTCATTGGTGAAAACGTTACTGATATGCCACAGAGTTTCGCCCT‑GGGTTTTTAACGCGTTCACCAGCGCAGGA‑TGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACt < 1:652886/238‑1 (MQ=255) gTGCCAGTTTAAAGGGGG‑TTTCGTTTGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CCCGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCATTGGTGAAAACGTTACTGATATGCCACAGAGTTTCGCCCT‑GGGTTTTTAACGCGTTCACCAGCGCAGGA‑TGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTcc‑ttgcc < 2:498884/238‑1 (MQ=255) gCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCATTGGTGAAAACGTTACTGATATGCCACAGAGTTTCGCCCT‑GGGGTTTTAACGCGTTCACCAGCGCAGGA‑TGGCAATGGCCCAACGCCGTAACTGCAATTCCACCCCCCGAATCGACAAAATcc‑ttgcctt > 1:715000/1‑238 (MQ=255) g‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGGTTACGCCCAAGACACAGCCCCGGTTCATTGGGGGAAACGTTACTGTTATGCCACAGAGTTTCGCCCT‑GGGGTTTTAACTCGATCACCCGCGCCGAG‑TGGGAATGGGCCCACGGCGTAACTGCAAAGCCACCCCCGCAATCGACAAACCCCTTTCCCTTCCTGACCCCacgta > 2:833067/1‑234 (MQ=255) tttctttctttcctgtccGGAGTT‑CAAAAACA‑C‑CACCCGTGCGGCAAACGTGGCCCCA‑ATCAGTTTACGCCCCAGACGCAGCGCCGGTTCATTGGTGAAAACGTTACTGATATGCCACAGAGTTTCGCCCT‑GGGTTTTTAACGCGTTCACCAGCGCAGGA‑TGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCC‑TTGCCTTGCTGATCCCAGATTCgg < 2:543868/222‑1 (MQ=255) tgtct‑CC‑GTGCCGGGTTT‑CA‑AAACACC‑CAACCGGTCGGGAAAGGTGTCCTCA‑ATCAGTTTACGCGCAAGTAGCAGGTCCGTTTCAATGGTGAAAACGTTACTGATATGCCACAGAGGTTCGCCCT‑GGGTTTTTAACGCGTTCACCAGCGCAGGA‑TGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCC‑TTGCCTTGCTGATCCCAGATTCGGCTGCCCt < 2:916056/235‑1 (MQ=255) aGCTT‑CC‑GTGCCGGAGTT‑CATAAACC‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCATTGGTGAAAACGTTACTGATATGCCACAGAGTTTCGCCCT‑GGGTTTTTAACGCGTTCACCAGCGCAGGA‑TGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCC‑TTGCCTTGCTGATCCCAGATTCGGCTGCCCt < 1:138094/239‑1 (MQ=255) tt‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCATTGGTGAAAACGTTACTGATATGCCACAGAGTTTCGCCCT‑GGGTTTTTAACGCGTTCAc > 1:16028/1‑141 (MQ=255) tt‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCATTGGTGAAAACGTTACTGATATGCCACAGAGTTTCGCCCT‑GGGTTTTTAACGCGTTCAc < 2:16028/141‑1 (MQ=255) | GATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAA‑CAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGG‑TTTCGTTAGCTT‑CC‑GTGCCGGAGTT‑CATAAACA‑C‑CACGCGTTCGGCAAACGTTGCCTCA‑ATCAGTTTACGCCCAAGACGCAGCGCCGGTTCATTGGTGAAAACGTTACTGATATGCCACAGAGTTTCGCCCT‑GGGTTTTTAACGCGTTCACCAGCGCAGGA‑TGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCC‑TTGCCTTGCTGATCCCAGATTCGGCTGCCCT > NC_000913/3489623‑3490084 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |