| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 417,593 | A→G | 17.9% | E151G (GAG→GGG) | phoB → | response regulator in two‑component regulatory system with PhoR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 417,593 | 0 | A | G | 17.9% | 107.0 / 3.5 | 56 | E151G (GAG→GGG) | phoB | response regulator in two‑component regulatory system with PhoR |
| Reads supporting (aligned to +/- strand): ref base A (11/33); new base G (2/10); total (13/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGATGACCCGGGATATTCCAGTGGTGATGTTGACCGCCAGAGGGGAAGAAGAAGATCGCGTGCGCGGCCTTGAAACCGGCGCGGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCGATGTCCACATTC‑GTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGATATCGTTTTTCAACCCG > NC_000913/417356‑417824 | cGATGCCCCGGGATATTCCAGTGGTGATGTTGACCGCCAGAGGGGAAGAAGAAGATCGCGTGCGGGGCCTTGAAACCGGCGCGGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAagag < 1:207005/239‑1 (MQ=255) ggtggcccGGGATATTCCGGTGGTGATTTTGGCCGCCAGAGGGAAAGAAGAATAACGCGTGCGGGGCATTGAAACCGGCGCGGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAagag < 1:909122/233‑1 (MQ=255) ggagACCGGGGATATTCCAGTGGGTATGTTGCCCGCCAGAGGGGAAGAAGAAGATCGCGTGCGCGTCCTTGAAACCGGCGAGGATGCATATAACACCAAGCCGTTTTCGCCGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAagag < 1:253640/235‑1 (MQ=255) tGACCCGGGATATTCCAGTGGTGATGTTGACCGCCAGAGGGGAAGAAGAAGATCGCGTGCGCGGCCTTGAAACCGGCGCGGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAAGGGGGATTGAAGTGCAGGGATTAAGTCTCGACCCGCCAACTCACCGGGGGAT‑GGG‑‑GGGCGAagaggc > 1:301483/1‑236 (MQ=255) tggtgATGTTGACCGCCAGAGGGGAAGAAGAAGATCGCGTGCGCGGCCTTGAAACCGGCGCGGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCCCCGAGGGAT‑GGC‑‑GGGGGGAAAGCCGCCGGGGGTGGGGGCGACa > 1:326857/1‑239 (MQ=255) tggtgATGTTGACCGCCAGAGGGGAAGAAGAAGATCGCGTGCGCGGCCTTGAAACCGGCGCGGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGGGATTGAGATGCAGGGATTAAGTCCCGGCCCGCCATCTCACCGGGGGAT‑GGC‑‑GGGGGAAGGGCCCCCGGGAACGGGGCCggcc > 1:20265/1‑236 (MQ=255) gtgATGTTGACCGCCAGAGGGGAAGAAGAAGATCGCGTGCGCGGCCTTGAAACCGGCGCGGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGCCCCGACCCGACATCTCACCGAGGGAG‑TGC‑‑GGGGGAAGAGCCGCTGGGGATGGGGCCGCCAGa > 1:735651/1‑239 (MQ=255) aTGTTGACCGCCAGAGGGGAAGAAGAAGATCGCGTGCGCGGCCTTGAAACCGGCGCGGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGGAGAGACGCTGGAGGTGGGGCGGGCAGAAtt > 1:759216/1‑239 (MQ=255) aTGTTGACCGCCAGAGGGGAAGAAGAAGATCGCGTGCGCGGCCTTGAAACCGGCGCGGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGGCTCGACCCGACATCCCCCCGAGTGAT‑GGC‑‑GGGGGAAAAGACGCCGGGGCAGGGGCCgcccagatt > 1:670985/1‑231 (MQ=255) cAGGGGGGAAGAAGAAGATCGCGTGCGCGGCCTTGAAACCGGCGCGGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTaaa < 1:832335/232‑1 (MQ=255) agaagaagaTCGGGGGGGCGGCCTTGAAACCGGCGGGGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACtttttt < 1:866910/238‑1 (MQ=255) agaagaagaTCGCGTGCGCGGCCTTGAAACCGGCGCGGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGTGGGAGAGGGGATTGGGATGCAGGGATTAAGTCTCGACCCGACATCCCACCGAGGGGT‑GGCGGGGGGGAGGAGCCCGGGGAGAGGGGGCGCCAAGAATAAAAACTG‑TGCACtttttt > 2:685425/1‑239 (MQ=255) gaagaagaTCGCGTGCGCGGCCTTGAAACCGGCGCGGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGGGATTGAGATGCAGGGAGTAAGTCTCTACCCGCCATCTCACCGGGTGAT‑GGG‑‑GGGGGGAGAGACGCGGGGGAGGGGGGGGACCGAAATTAAAaagctgtccccttgtc > 2:832335/1‑228 (MQ=255) agaagaTCGGGGGCCGGGCTTTTAAACCGTCGCGGATGACTATATCCCCAAGCCGTTTTCGGCGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATTTCGCCAAGGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCGCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGa < 2:740215/239‑1 (MQ=255) cgTGCGCGGCCTTGAAACCGGCGCGGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGGGAT‑GGC‑‑GGGCGAAAAGCCGCTGGGGATGGGGCCGACCGAATTTTAACTGGTTCACCTTTTTTTGACGCATcccg > 1:82253/1‑237 (MQ=255) gTGCGCGGCCTTGAAACGGGCGGGGATGGCTAAATCTCGAAGCCGTTGTCGACGAAGGAGCTGGTGGCGCGAAGCAAAGCGGTAATGCGCCGTATTTCGCCAAGGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGGCATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTg < 1:404518/238‑1 (MQ=255) gcgcGGCCTTGAAACCGGCGCGGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCTGGTGGCGCGAATAAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGGGGCAGGGGGGGTTGGGATGACGGGGATAAGGCTCGCCACCACACCTCACCGAGGGATGGGG‑‑GGGGGGAGGGGCCCGGGGAATGGGGCGAGCAAAATTTAAACTAGCGCACTTTTTTTTGACGAATACTgcg > 2:859523/1‑237 (MQ=255) gcgggaggaCTTTACCCCAAAGCCGTTTTCGCGGAAGGGGGTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGagc < 2:872142/236‑1 (MQ=255) ggcgggtaattatcccccATGCCGTTTTCGTTGGAGGAGTCGGTGGGCCGAAATAAAGGGATAAGGCGCCGTTTGTCGCCAAGGGCGGGGGAAGAGGTGATTGGGATGCAGGGATTAATGCTCGGCCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGagc < 2:100630/222‑1 (MQ=255) cgcgattgatagccccccAAGCCGGTTTCGCGGAAGGGGTGGTTGGCGCGAAGCAAAGTGGTAATGCCCCGTACTTCGCCAATGGCGGTGGAAGAGGGGATTGAGATGCAGGGATTAAGTCTCGACCCGACAGCTCACCGGGTGAT‑GGC‑‑GGGCGAAGGGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGagc < 2:495183/222‑1 (MQ=255) cgGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGagca < 1:735150/238‑1 (MQ=255) tataTCACCAAGCCGTTTTCGCCGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAg < 1:601231/210‑1 (MQ=255) gtatCCCCAGGCCGTTTTCGCCGAAGGGGCTGGGGGCGGAAATCAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAAc < 1:309901/238‑1 (MQ=255) taggctttttCGGCGGAGGGGCGGGTGGGGGGAATAAAATGTGTAATGGGCGGGATTTGGCGAATGGCGGTGGAAGAGGTGATGGAGGTGCAGGGATTAAGTCTCGCCCCGACATCTCACCGAGTGAA‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCAGCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTg < 2:75480/233‑1 (MQ=255) aaGGCGTTTTCGCCGAGGGGGTTGGGGGCGGGAATCAAAGGGGTAATGCGCCGTATTTCGCCAATGGGGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCGCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTg < 2:737083/239‑1 (MQ=255) aaGCCGTTTTCGCCGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTg < 1:582266/239‑1 (MQ=255) aaGCCGTTTTCGCCGAAGGAGCTGGTGGAGGGAATCAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTg < 1:820399/239‑1 (MQ=255) ccccGAAGGGGCGGGTGGCGCGAATCAAAGCGGTAAGGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGTGATTGGGATGCAGGGATTAAGGCTCGACCCGACATCTCACCGATTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAAc < 2:640295/237‑1 (MQ=255) cGCCGAAGGAGCTGGTGGCGCGAATCAAAGGGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAAc < 1:561123/239‑1 (MQ=255) cGCCGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAAc < 1:199063/239‑1 (MQ=255) cGCCGAAGGAGCTGGTGGCGCGAAACAAAGCGGTAAGGCGCCTGATTTCGGCAATGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAAc < 1:728360/239‑1 (MQ=255) cGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGGAGAGCCCCTGGGGGTGGGGGCGACAGAATTTTAACTTCTTCACTTTTTTTTGGCGCCTCCTGAGCGCGTGTACAACCGCGAGCCGCTGTTAAAACACCGCTGGGGGACaaaaggt > 1:228829/1‑235 (MQ=255) gCTGGGGGCGCGAACGAAAGCGGTAATGCGCCTTATTTCGCCAATGGCGGTGGGAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCATCTGTTAAACCGCGTCTGGGGAGCGAACGTGTAtgtg < 1:136415/238‑1 (MQ=255) gggggcggaaaTCAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGaa < 1:541016/229‑1 (MQ=255) cgaaataaaGGGGTAATGCGCCTTATTTCGCCAATGGCGGTGGAAGAGGTGATTGGGATGCAGGGATTAAGTCCCGCCCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCAc < 2:760398/233‑1 (MQ=255) cgAATCAAGGCGGTAATGCGCCGTATTTCGCCAATGGCTGTGGAAGAGGTGATGGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCa < 1:375412/238‑1 (MQ=255) caaaTCAAGGCGGGAATGCGCCGTATGTCGGCAAGGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCa < 1:859523/236‑1 (MQ=255) ggatcaagggggttgtgccgcGTATTTCGGCAATGGCGGTAGAAGGGGGGGTTGAGTTGCAGGGATTAAGGCTAGACCCGACATCTCACCGGGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATTGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGATCTAACGTGTATGTGGAAGACCGCAc < 2:343755/218‑1 (MQ=255) tCAAAGCGGTATTGCGCTGTTTTTCGCCAATGGGGGTGGAAGAGGTGATTGGGAGGCAGGGATTAGGTCTCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTc < 2:326857/239‑1 (MQ=255) cGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACg < 1:553036/152‑1 (MQ=255) ttttCGCCAAGGGGGGGGGAAGGGGTGATTGGGAGGCGGGGATTAAGTCCCGACCCGAAATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGGGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCGATGTCCACATTC‑GTCGCCt < 2:670985/238‑1 (MQ=255) cGCCAATGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCCGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAAACCGCACGGTCGATGTCCAACTTC‑GTCGCCTGCGt > 1:106062/1‑239 (MQ=255) gCCAAGGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCGATGTCCACATTC‑GTCGCCTGCGTa < 1:623050/239‑1 (MQ=255) tgggtttttgtgggggaGGGATTAGGGCTCGGCCCGACATTTCACCGAGTGAT‑GGC‑‑GGGCGAAGGGCCGCTGGAGATGGGGCGGACAGAATTTAAACTGCTGCACTTTTTTAGGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCGATGTCCACATTC‑GTCGCCTGCGTAAAGCACTGGAGCCcg < 2:120140/222‑1 (MQ=255) tGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGGTGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCCGGGCGCGTGTAAAGCCCGGAGCAGCCTTTAAAACACGTCTGGGGGACTAACGGGAATGGGGAAAGCCGCCCGGGCGGTGGCCACATTCGGCCGCCT‑CGGAAACCACTGGACCCCGGCGGGGAGGAcccc > 2:602620/1‑237 (MQ=255) ggaggggtttaatgtgcGACCCGACATCTCACCGAGGGAT‑GGC‑‑GGGGGAAGGGCCGCTGGAGATGGGGCCGAACGAATTTAAACGGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGGGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCGATGTCCACATTC‑GTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGc < 2:45330/223‑1 (MQ=255) gCAGGGATTAAGTCCTGACCCGGCATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGGTGGAAATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCGATGTCCACATTC‑GTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGc < 1:131365/238‑1 (MQ=255) gggggAATAAGGCGCGACCCGCCCTCTCACCGGGTGAT‑GGC‑‑GGGGGAAGAGCCGCTGGGGATGGGGGCGACAGAATTTAAACTGCTGCACTTTTTTATGACGGATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCGATGTCCACATTC‑GTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCa < 2:735651/236‑1 (MQ=255) gggtgttAAGTCCCGCCCCGCCATCTCGCGGAGTGAT‑GGG‑‑GGGAGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCGATGTCCACATTC‑GTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCAt < 2:265684/233‑1 (MQ=255) gggggttaggttccgccccGACATCTCAACGGTGGAG‑GGG‑‑CGGCGAAGGGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGGTGCACTGTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCGATGTCCACATTC‑GTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCAt < 2:822790/222‑1 (MQ=255) aGGGATTAAGTCTCGACCCGACATCTCACCGGGTGAT‑GGG‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCGATGTCCACATTC‑GTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCAt < 1:864255/238‑1 (MQ=255) ggcccGGCATCCTACCGGGTGAT‑GGC‑‑GGGCGAAGGGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCGATGTCCACATTC‑GTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTgcg < 1:300695/237‑1 (MQ=255) gACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAAAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCGATGTCCACATTC‑GTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTgcg < 1:152030/239‑1 (MQ=255) gcggcgggcccgcccggatgtagggc‑‑gggcgAGGGGCTGCGGGGGATGGGGGCGGCAGAATTTAACCTGGAGCCTTTTTTTGTGCCGGATCCTGAGCACGTGTACAGCGGGGAGCAGGTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCGATGTCCACATTC‑GTCGCCTGCGTAAAGCACTGGGGCCCGGCGGGCATGACCGCATGGTGCAGACCGTgcg < 2:213111/216‑1 (MQ=255) gccctcccACCGGGTGGT‑GGC‑‑GGGCGAAGGGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCCCTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCGATGTCCACATTC‑GTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTa < 2:228829/232‑1 (MQ=255) gACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCGATGTCCACATTC‑GTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTa < 1:685425/239‑1 (MQ=255) tGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCg < 2:14349/150‑1 (MQ=255) tGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCg > 1:14349/1‑150 (MQ=255) gggggAAGGGCCGGTGGGGATGGGGCCGATAGAATTTAAACTGCTGCACTTTTTTATGCCGCATCCTGAGCGGGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCGATGTCCACATTC‑GTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGATATCGTTTTTCAAcc < 2:82253/238‑1 (MQ=255) gcgAAGGGCCGCTGGAGGTTGGGCCTACAGAATTTAAACTGCTGGACTTTGTTATGACGCATCCTGAGCGCGTGTCCAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCGATGTCCACATTC‑GTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGATATCGTTTTTCAACCCg < 2:759216/238‑1 (MQ=255) | CGATGACCCGGGATATTCCAGTGGTGATGTTGACCGCCAGAGGGGAAGAAGAAGATCGCGTGCGCGGCCTTGAAACCGGCGCGGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGAT‑GGC‑‑GGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCGATGTCCACATTC‑GTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGATATCGTTTTTCAACCCG > NC_000913/417356‑417824 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |