| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 421,608 | T→G | 25.1% | V208G (GTG→GGG) | proY → | proline‑specific permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 421,608 | 0 | T | G | 25.1% | 87.5 / 2.3 | 56 | V208G (GTG→GGG) | proY | proline‑specific permease |
| Reads supporting (aligned to +/- strand): ref base T (16/24); new base G (12/4); total (28/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.66e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCAT‑CATCATCTGGGGGATTGGCAACGGCGGG‑CAACCGACC‑GGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCA‑TGGTAATGTCGTTGCAAATGGTGATGT‑TTGC‑TTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCATTATGTCTATCTA‑CCCGTGGAATCAGGTTGGCACTGCCGGTAGCCCGTTCGTGCTGACGTTCCAGCATATGGGCATTACCTTTGCCGCCAGCATTCT > NC_000913/421382‑421842 | aTCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCAT‑CATCATCTGGGGGATTGGCAACGGCGGG‑CAACCGACC‑GGAATTCATAACCTGTGGGGCAACGGCGGGTTCTTCAGTAACGGCTGGGCTTGCA‑TGGGAATGGCGTTGCAAATGGGGAGGT‑TTGT‑TTa > 1:594300/1‑239 (MQ=255) tAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCAT‑CATCATCTGGGGGATTGGCAACGGCGGG‑CAACCGACC‑GGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCA‑TGGGAAGTTCGTTGCAAAAGGGGGTGT‑TTTG‑TTTCGGTtggggtgaa > 1:605175/1‑233 (MQ=255) tAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCAT‑CATCATCTGGGGGATTGGCAACGGCGGG‑CAACCGACC‑GGGATTACTACACTGGGGGGCAAAGGGGGGTTCTTTCGGAACGGCCGGCTTGGCA‑CGGTGAGTTTGTTCGAAATGGGGTGGT‑TTTG‑TTATGGTggggggtaa > 2:211700/1‑233 (MQ=255) atgaGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCAT‑CATCATCTGGGGGATTGGCAACGGCGGG‑CAACCGACC‑GGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCCTGGGA‑TTGGAATGTCGTTTCACAAGGGGGAGT‑TTGG‑TTACCGTGGGATGGAAATTTTCgg > 1:54504/1‑239 (MQ=255) cGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCAT‑CATCATCTGGGGGATTGGCAACGGCGGG‑CAACCGACC‑GGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCCTGGCC‑TGGGAATGTCGGTGACAATTGGGAGTT‑TTGC‑TTTCGGGGGGTTGGAAAATATTGGGAtt > 1:859441/1‑238 (MQ=255) tGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCAT‑CATCATCTGGGGGATTGGCAACGGCGGG‑CAACCGACC‑GGTATTCATAACCTGTGGTGCAACGGCGGCTTCTTCAGTACAGGCTGGCTTGGTC‑TGTGAATGTCGTTGCCAATGGGGGTGT‑TTTC‑TTTCGGTGGGGTCGGAATTTTTGGGGttta > 1:586346/1‑236 (MQ=255) ttCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCAT‑CATCATCTGGGGGATTGGCAACGGCGGG‑CAACCGACC‑GGGATTCATAAACTTTGGAGCAACGGCGGCTTCTTCCGGAACGGCTGGGTTTGCA‑TGGGAAATGCGTTTCCAATGGGGCAGT‑TTGCTTTAGGGTGGG‑TCCAAAATATTCGGGTTTCCGCCggggg > 1:906628/1‑236 (MQ=255) aGCTGGAATTTTGGCTCTCGTTCTTTAAAGTCGCCGCCATCATCATCATGATGGTCGCCGGTTTCGGCAA‑AATCATCTGGGGGATTGGCAACGGCGGG‑CAACCGACC‑GGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTGGGCA‑TGGTAATGGCGTTGCAAATGGTGATGT‑TTGC‑TTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGaa < 1:102913/238‑1 (MQ=255) cTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCAT‑CATCATCTGGGGGATTGGCAACGGCGGG‑CAACCGACC‑GGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCA‑TGGTAATGTCGTTGCAAATGGTGATGT‑TTGC‑TTACGGTGGGAt < 1:150507/203‑1 (MQ=255) gAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCAT‑CATCATCTGGGGGATTGGCAACGGCGGG‑CAACCGACC‑GGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGGTTGGCA‑TGGTAAAGTCGTTGGAAATGGGGATGG‑TTGG‑TTACCGTGGGATCGGAATTATCGGGGTTACCGCCGGGGAAGCGAAAGAt > 1:603865/1‑237 (MQ=255) ttgtGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTGGCTGGTTCCGGCAT‑CATCTCCTGGGGGATTGGCAACGGCGGG‑CAACCGACC‑GGTTTTCATAACCTGTGGAGCAACGGCGGCTTCTTAAGTAACGGCTGGCTTGGCA‑TGGTAATGTCGTTGCAAATGGTGATGT‑TTGC‑TTACGGGGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTga < 1:645910/236‑1 (MQ=255) ttgtttCTCTTTTTTTAAGGTCATCCCCAGCAATAGCATGATTGGCGCTGGTTT‑GGAATGCACAGTCGGGGGGATTGGCAA‑GGCGGGACACCCGTCG‑TGTATGCATAACCGGTGGGGCAACGGCGGCTTTTTCAG‑AAGGGCCGGGGTGGGATTGGTAAGGTCGTTGAAAATGGTGATGT‑TTGT‑TTCCGGTGGGATGAAAATGACCGGGATTACCGCCGGTGAAGCGAAAGATCCTgaga < 2:435680/235‑1 (MQ=255) gTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCAT‑CATCATCTGGGGGATTGGCAACGGCGGG‑CAACCGACC‑GGGATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCA‑TGGTAATGTCGTTGCCAATGGGGATGT‑TTTC‑TTACCGTGGGGTCGAAATTATTGGGATTACCGCCCGTGAAGCGAAAAATCCTTAGgaa > 1:655466/1‑238 (MQ=255) gTTCTTTAAAGTCGCCACCATCATCATCATGATTGCCGCCGGTTGCGGCAT‑GATCATCTGGGGAATTGGCAACGGCGGG‑CAACCGACC‑GGTATTCATACCCTGGGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTGGGCA‑TGGTAATGTCGTTGCAAATGGTGATGT‑TTGC‑TTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATAc < 1:8329/239‑1 (MQ=255) cccctcagtttttgccgcgtttgcGGCAT‑CTTCGTCGGGGGGTTTGGCAACGGCGGG‑‑AACCCACCGGGTATTAATAACCTGTGGAGAAACGGCGGGTTTTTCATTAACGGCTGGTTTGGCA‑TGGTAATGTCGTGGCAAATGGGGATGT‑TTGC‑TTCCGGTGGGATCGAAATTATCGGGTTTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGcc < 2:476171/216‑1 (MQ=255) atcatGTTTGTCGGCGTTTTCGGCAT‑CAGCTTTGGGGGGATTGGCAAGGGGGGG‑CACCCGACC‑GGTTTCTATAACCTGTGGAGCAGCGGCGGTTTCATCATTACCGGTGGGCTGGGCT‑TGGTAATGTCGTTGCAAATGGTGATGT‑TTGC‑TTAGGGGGGGATGAAAATTATCGGGATTCCCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGAt < 2:184163/239‑1 (MQ=255) atcatGATTGTCGCCGGTTTCGGCAT‑CATCATCTGGGGGATTGGCAACGGCGGG‑CAACCGACC‑GGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCA‑TGGTAATGTCGTTGCAAATGGGGATGT‑TTGC‑TTACGGGGGGATCGAAATTTTCGGGATTACCGCCGGGGAAGCGCAAGATCCTGGGGAATCGATACCCGGGGCGCTTAACTCCGTGcccga > 1:804387/1‑236 (MQ=255) atcatGATTGCCGCCGGTTGCGGGAT‑CATCATCGGGGGTATTGGCAACGGCGGG‑CAACCGACC‑GGTTTTCATAACCTGGGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCA‑TGGTAATGTCGTTGCAAATGGTGATGT‑TTGC‑TTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGAt < 1:327737/239‑1 (MQ=255) catGATGGGCGCGGGTTCCGGCAT‑CATCATCTGGGGGATGGGCAAGGGCGGG‑CAACCGACC‑GGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAGCGGCTGGCTTGGCA‑TGGTAATGTCGTTGCAAATGGTGATGT‑TTGC‑TTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGc < 1:848277/239‑1 (MQ=255) gcccctgTTTCGGGAT‑CGTCCTGTGGGGTATTGGCGACGGGGGC‑CAACCGACG‑TGTTTTCAAAACCTGGGGAGCACGGGCGGTTTCTTAGGTAACGGTTGGCTTGGCA‑TGGTAATGTCGTTGAAAATGGTGATGT‑TTGC‑TTAGGGGGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTg < 2:777277/233‑1 (MQ=255) gcGCTGGTTTCGGCTT‑ACTCCTTGGGGGGGTTGGGACGGGGGGG‑AACCCGGCC‑GGTTTTCATACCCTGGGGAGCACCGGCGGTTTCTTCAGTAAGGGCTGGCTTGGCA‑GGGAAATGTCGTTGAAAAGGGTGATGT‑TTGC‑TTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTg < 2:12231/238‑1 (MQ=255) gCCGGTTTCGGCAT‑CATCATCTGGGGGATTGGCAACGGCGGG‑CAACCGACC‑GGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCA‑TGGTAATGTCGTTGCAAATGGTGATGt‑t < 2:809582/134‑1 (MQ=255) gCCGGTTTCGGCAT‑CATCATCTGGGGGATTGGCAACGGCGGG‑CAACCGACC‑GGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCA‑TGGTAATGTCGTTGCAAATGGTGATGt‑t > 1:809582/1‑134 (MQ=255) gCCGGTTTCGGCAT‑CATCATCTGGGGGATTGGCAACGGCGGG‑CAACCGACC‑GGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCA‑TGGTAATGTCGTTGCAAATGGGGATGT‑TTGC‑TTTCGGTGGGGTCGAAATTTTTGGGGTTAACGCCGGTGAAGGGAAAGATCCTGAGAAATCGATACCGCGGTCGATTAACTCCGGGCCGCTGGGGTTTCTGgt > 1:80710/1‑239 (MQ=255) acatcTGGGGGTTGGGCAACGGCGGG‑CAACCGACG‑GTTTTTCATAACCTTGGGAGCAACGGGGGTTTCTTCAGTAACGGCTGGCTTGGCA‑TGGTAATGTCGTTGCAAATGGGGATGT‑TTGC‑TTACGGTGGGATCGAAATTATGGGTATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTACg < 1:230396/238‑1 (MQ=255) tttGGAAACGGGGGC‑CCACCGACC‑GTTATTAATACCCTGGGGAGCACCGGGGGTTTCTTAATTACCGGGTGGTTTGGCA‑TGGTAATGTCGTTGCAAATGGTGATGT‑TTGC‑TTACGGGGGGATCGAATTTATCGGGTTTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCa < 2:605175/237‑1 (MQ=255) acccgacc‑gTTTTTCATAACCTGTGGAGCAACGGCGGCTTCTTAAGTACCGGCTGGCTTGGCT‑TGGTAATTTCTTTGCAAATGGTGATGT‑TTGC‑TTACGGGGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCATTATGTCTATCTA‑CCCg < 1:118263/237‑1 (MQ=255) cccc‑gGTATCTATAACTGGTGGAGCAGCGGCTGTTTTTTCGTTAACGGTTGGTTTGGCA‑TGGTAATGTCTTGTGAAAGGGTGAGTT‑TTGC‑TTCCGGGGGGATCAAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCATTATGTCTATCTA‑CCCGTGGa < 2:583891/237‑1 (MQ=255) ttCATACCCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCA‑TGGTAATGTCGTTGCAAATGGTGATGT‑TTGC‑TTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTga < 1:794827/136‑1 (MQ=255) tccccTTTGGTGCAACGGCGGTTTCTTCAGTAACGGGTGGCTTGGCA‑TGGTAATGTCGTTGAAAATGGTGATGT‑TTGC‑TTACGGTGGAATCGAAATTACCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCATTATGTCTATCTA‑CCCGTGGAATCAGGTTGGCa < 1:919526/236‑1 (MQ=255) cTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCA‑TGGTAATGTCGTTGCAAATGGTGATGT‑TTGC‑TTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGGGTTCTGCGTCGGTACGCTGTTCGGCATTATGTCTTTCTA‑CCCGTGGAATCCgg > 1:604440/1‑229 (MQ=255) gtgGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTTGCA‑TGGTAATGTCGTTGCAAATGGTGATGT‑TTGC‑TTACGGTGGGATCGAAATTATTGGGATTAACGCCGGTGAAGCGAAAGATTCTGAGAAATCGATAACGCTGGCGGTTAACTCCGGGCCGATGCGTATTCTGGGGTTTCACGTCGGGAACCGGTTCGTCATTTTGTCTATTTA‑CCCCGGGGATCCGGTTggtccttcgg > 2:603035/1‑231 (MQ=255) gtgGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCA‑TGGTAATGTCGTTGCAAATGGTGATGT‑TTGC‑TTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGGATTCTGGGGTTCTACGTCGGTACGCTGTTCGTCATTATGTCTATCTA‑CCCGTGGAATCAGGTTGGCACTGCCg > 1:348902/1‑239 (MQ=255) gtgGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCA‑TGGTAATGTCGTTGCAAATGGTGATGT‑TTGC‑TTACGGGGGGATCGAAATTATCGGGGTTAACGCCGGGGAAGCGAAAGATCCTGGGAAATCGATa > 2:794827/1‑136 (MQ=255) gtgGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCA‑TGGTAATGTCGTTGCAAATGGGGATGT‑TTGC‑TTACGGTGGGATCGAAATTATCGGGCTTACCGCCGGGGAAGCGAAAGGTCCTGAGAAATCGATACCGCGTGCGATTAACTCCCGGCCGTAGCGGCTTCTGGGGTTTTACGGCGGGACGGTGTTCTGCATTTTGTCCATCTA‑CCCCGGGAGACAAGTTgggcatgccg > 2:547378/1‑231 (MQ=255) tgGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCA‑TGGTAATGTCGGTGCAAATGGTGATGT‑TTTC‑TTACGGTGGGGTCGAAATTATCGGGGTTAACGCCGGGGGAGCGAAAAATCCGTGGAAATCGATACCGCGTGCGATTAACCCCGTGCCGATGCGGATTCTGGGTGTCTACGCAGGGACCCCTTCCGTCATTTTTCGCATTTA‑CCCGTGGGATcgaggggggccggccgg > 2:156490/1‑223 (MQ=255) gtgCAACGGCGGCTTCTTCAGTAACGGCTGACATGGCA‑TTGCGATGTCGTTGCAAATGGTGATGT‑TTGC‑TTACGGTGGGATCGAAATTATCGGGGTTACCGCCGGTGAAGGCAAAGGTCCTGAGAAATCGTAACCGCGCGCGACTAACTCCATGCCGATGCGTATTTTGGTGTTCCTCCGCGGGACGGTTTTTGTCATTAT‑TGTGTCTATCCCCTGGTCTCAGGTTTGCACGCCCggca > 2:602123/3‑237 (MQ=255) cAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCA‑TGGTAATGTCGGTGCAAATGGTGATGT‑TTGC‑TTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGGACGCTGTTCTTCATTATGTCTATCTA‑CCCGTGGAATCAGGTTGGCACTGCCGGTAGc > 1:903645/1‑238 (MQ=255) aaCGGCGGCTTCTTCAGTAACGGCTGGCTTGGCA‑TGGTAATGTCGTTGCAAATGGTGATGT‑TTGC‑TTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAAACGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGGGTTCTTCGTCGGGACCCTGTTCGGCCTTTTTTCTATCTA‑CCCGGGGGATAAGGTTGGCACTCCCGGGAGccc > 2:247627/1‑239 (MQ=255) aCGGCGGCTTCTTCAGTAACGGCTGGCTTGGCA‑TGGTAATGTCGTTGCAAATGGTGATGT‑TTGC‑TTACGGTGGGATCGAAATTAt < 1:216072/85‑1 (MQ=255) aCGGCGGCTTCTTCAGTAACGGCTGGCTTGGCA‑TGGTAATGTCGTTGCAAATGGTGATGT‑TTGC‑TTACGGTGGGATCGAAATTAt > 2:216072/1‑85 (MQ=255) aCGGCGGCTTCTTCAGTAACGGCTGGCTTGGCA‑TGGTAATGTCGTTGCAAATGGTGATGT‑TTGC‑TTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTc > 1:8832/1‑170 (MQ=255) aCGGCGGCTTCTTCAGTAACGGCTGGCTTGGCA‑TGGTAATGTCGTTGCAAATGGTGATGT‑TTGC‑TTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTc < 2:8832/170‑1 (MQ=255) gcTTCTTCAGTAACGGCTGGCTTGGCA‑TGGTAATGTCGTTGCAAATGGTGATGT‑TTGC‑TTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCTATACCCCGGGCGTTTAACCCCGTGCCGCTGCGTATTCTGGTGTTTTACGTCGGTCGGCTTTTCGTCATTATGGCTTTTTA‑CCCGGGGAGTCAGGTGGGACATGCCGGTAGCCCCttggg > 2:912251/1‑235 (MQ=255) tggttgggCG‑TGGTAATGTGGTTGAAAATGGTGATGT‑TTGC‑TTACGGGGGGATCGAATTTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCATTATGTCTATCTA‑CCCGTGGAATCAGGTTGGCACTGCCGGTAGCCCGTTCGTGCTGACGTTCCAGCata < 1:466362/232‑1 (MQ=255) tggttTGGCA‑TGATTATGTTGGTGAAAGTGGTGTTGT‑TTGG‑TTGGGGGGGGAGCAAATTTTGCGGGATTCCCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCATTATGTCTATCTA‑CCCGTGGAATCAGGTTGGCACTGCCGGTAGCCCGTTCGTGCTGACGTTCCAGCata < 2:329256/238‑1 (MQ=255) tggttTGGAA‑TGGAAAGCTCGGTGCAAGTGGTGTTGT‑TTGC‑TTACGGGGGGATCGAATTTTCCGGTATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCATTATGTCTATCTA‑CCCGTGGAATCAGGTTGGCACTGCCGGTAGCCCGTTCGTGCTGACGTTCCAGCata < 1:601518/238‑1 (MQ=255) gtgctTGGCA‑TGGGAATGGCGTTGCAAGTGGGAATGT‑TTGC‑TAACGGGGGGATCGAAATTACCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCATTATGTCTATCTA‑CCCGTGGAATCAGGTTGGCACTGCCGGTAGCCCGTTCGTGCTGACGTTCCAGCata < 1:635227/236‑1 (MQ=255) gggctTGGCA‑GGGTAATGTCGTTGCAAA‑GGGGATTTGTTGA‑TTACGGTGGGATGGAATTTAGCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCATTATGTCTATCTA‑CCCGTGGAATCAGGTTGGCACTGCCGGTAGCCCGTTCGTGCTGACGTTCCAGCata < 1:553811/237‑1 (MQ=255) gctTGGCA‑TGGTAATGTCGTTGCAAATGGTGATGT‑TTGC‑TTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCATTATGTCTATCTA‑CCCGTGGAATCAGGTTGGCACTGCCGGTATCCCGTTCGTGCTTCCGTTCCAGCATATg > 1:760658/1‑238 (MQ=255) ctTGGCA‑TGGTAATGTCGTTGCAAATGGTGATGT‑TTGC‑TTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCATTATGTCTATCTA‑CCCGTGGAATCAGGTTGGCACTGCCGGTAGCCCGTTCGTGCTGACGTTCCAGCATATgg > 1:329256/1‑238 (MQ=255) gTTGCAAATGGTGATTT‑TTGC‑TTACGGTGGGATCGAAATTAGCGGGATTCCCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCATTATGTCTATCTA‑CCCGTGGAATCAGGTTGGCACTGCCGGTAGCCCGTTCGTGCTGACGTTCCAGCATATGGGCATTACCTTTGCCGCCa < 1:211700/239‑1 (MQ=255) tgaaaaGGGTGATGT‑TTGC‑TTACGGGTGGAACAAAATTAGCGGAATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCATTATGTCTATCTA‑CCCGTGGAATCAGGTTGGCACTGCCGGTAGCCCGTTCGTGCTGACGTTCCAGCATATGGGCATTACCTTTGCCGCCAGc < 1:547378/236‑1 (MQ=255) tGCAAATGGTGATGT‑TTGC‑TTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCATTATGTCTATCTA‑CCCGTGGAATCAGGTTGGCACTGCCGGTAGCCCGTTCGTGCTGACGTTCCAGCATATGGGCATTACCTTTGCCGCCAGc > 1:241199/1‑239 (MQ=255) gCAAATGGTGATGT‑TTGC‑TTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTATGGTGTTCTACGTCGGTACGCTGTTCGCCCTTATGTCTATCTA‑CCCGTGGAATCAGGTTGGCACTGCCGGTAGCCCGTTCGTGCTGACGTTCCACCATATGGGAATTACCTTTGCCCCCAGCa > 2:670624/1‑239 (MQ=255) ttGGTGTGGT‑TTGT‑TTACGGTGGGATCGAATTTGCCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTACCGATGCGTATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCATTATGTCTATCTA‑CCCGTGGAATCAGGTTGGCACTGCCGGTAGCCCGTTCGTGCTGACGTTCCAGCATATGGGCATTACCTTTGCCGCCAGCATTCt < 1:277805/238‑1 (MQ=255) | ATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCAT‑CATCATCTGGGGGATTGGCAACGGCGGG‑CAACCGACC‑GGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCA‑TGGTAATGTCGTTGCAAATGGTGATGT‑TTGC‑TTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCATTATGTCTATCTA‑CCCGTGGAATCAGGTTGGCACTGCCGGTAGCCCGTTCGTGCTGACGTTCCAGCATATGGGCATTACCTTTGCCGCCAGCATTCT > NC_000913/421382‑421842 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |