New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 309109590 (1.070)4 (0.050) 4/266 11.7 4.5% intergenic (+43/‑37) endA/rsmE DNA‑specific endonuclease I/16S rRNA m(3)U1498 methyltransferase, SAM‑dependent
?NC_000913 = 3091101 84 (1.070)intergenic (+49/‑31) endA/rsmE DNA‑specific endonuclease I/16S rRNA m(3)U1498 methyltransferase, SAM‑dependent
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3090949‑3091095
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccccacgcgGTTGTACGCGTGGGGTAGGGGTTAACAAAAAGAATCCCGCTAGTGTAGGTTAGCTCTTTCGCGCCTGGCAAGCGCGTTGCACATACGGGTTATGATTGCCCTGCACCTTCGCGATGCGTTCATCGCGCTCGCACTCCCAG  <  NC_000913/3091101‑3090962
                                                                                                                                                                                                                                                                                               
atccgttgcCCGACTGCGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCATATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCA                                                                                                                                                  <  2:123072/134‑1
 TCCGGTCACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTTCACTAGCGGGATTCTTTTTGTTAACCCCTACCCCAC                                                                                                                                                 <  1:1372452/143‑1
    GGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCG                                                                                                                                              >  1:1073637/1‑143
                  ggtggggGCGCGTTGAACGCATCGCGAAGGTGCAGGGCCATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGCGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGGTTGTACGCGTGGG                                                                                                                                <  1:420739/136‑1
                               TGAACGCATCGCGCAGGTGCAGGGCAATCATACCCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGGTTGTACGCGTGGGGTAGGGGTTAACA                                                                                                                   <  1:919833/143‑1
                                        CGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGGTTGTACGCGTGGGGTAGGGGTTAACAAAAAGAATC                                                                                                          <  2:985432/143‑1
                                            AAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGGTTGTACGCGTGGGGTAGGGGTTAACAAAAAGAATCCCGC                                                                                                      <  2:1394891/143‑1
                                                                                                                                            CCACGGGGTGGTGCGCGTGGGGCAGGGGTTAACAAGAAGAAGCCCGCTAGTGTAGGTTAGCTCTTTCGCGCCTGGCAAGCGCGTTGCACATACGGGTTATGATTGCCCTGCACCTTCGCGATGCGTTCATCGCGCTCGCACTC      <  2:867194/143‑1
                                                                                                                                            CCACGCGGTTGTACGCGTGGGGTAGGGGTTAACAAAAAGAATCCCGCTAGTGTAGGTTAGCTCTTTCGCGCCTGGCAAGCGCGTTGCACATACGGGTTATGATTGCCCTGCACCTTCGCGACGCGTTCATCGGGCTCGCACTC      >  1:658134/1‑143
                                                                                                                                             CACGCGGTTGTACGCGTGGGGTAGGGGTTAACAAAAAGAATCCCGCTAGTGTAGGTTAGCTCTTTCGCGCCTGGCAAGCGCGTTGCACATACGGGTTATGATTGCCCTGCACCTTCGCGATGCGTTCATCGCGCTCGCACTCC     >  2:357012/1‑143
                                                                                                                                                GCGGTTGTACGCGTGGGGTAGGGGTTAACAAAAAGAATCCCGCTAGTGTAGGTTAGCTCTTTCGCGCCTGGCAAGCGCGTTGCACATACGGGTTATGATTGCCCTGCACCTTCGCGATGCGTTCATCGCGCTCGCACTCCCAG  >  2:457584/1‑143
                                                                                                                                                                                                                                                                                               
ATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3090949‑3091095
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccccacgcgGTTGTACGCGTGGGGTAGGGGTTAACAAAAAGAATCCCGCTAGTGTAGGTTAGCTCTTTCGCGCCTGGCAAGCGCGTTGCACATACGGGTTATGATTGCCCTGCACCTTCGCGATGCGTTCATCGCGCTCGCACTCCCAG  <  NC_000913/3091101‑3090962

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.