New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 258675NA (NA)77 (0.910) 63/284 0.2 100% intergenic (+776/‑1) crl/crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers/pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers
?NC_000913 1309405 = 0 (0.000)coding (865/1254 nt) kch voltage‑gated potassium channel

TCATATCTTTTGCCGAGAGTACAACAAACGCGTTATCTGCATCGTTATCACTCAGCGCCAGAATGGCCCGGCAACGATCGATTCCCGCTTTCTTTAATACAGAACTGTCATTACTGTCACCGGGGATAACATCAGCATTATCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGAATCGAATGTCCGCAAACAATAAAATGATCTTT  >  NC_000913/1309264‑1309543
                                                                                                                                             |                                                                                                                                          
cgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCg                                                                                                                                           >  2:1073803‑M2/142‑143 (MQ=255)
   tggcggctgttggtgctttggccgttactcatcaccccgtcagtagctgaacaggagcgacagctgatagaaacagaagccactggagcacctcaaacacaccatcatacactcaatcagtaagttggcagcatcaccCGCCt                                                                                                                                        <  1:151615‑M2/5‑1 (MQ=255)
          cggctgtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaaaaccatcatacactaattcagtaagttggcagcatcaccCGCCTAAGCGtt                                                                                                                                 <  2:275412‑M2/12‑1 (MQ=255)
           ggcggtgcttttgcccttacgctccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTg                                                                                                                                <  2:11146‑M2/13‑1 (MQ=255)
                tgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaccaccatcatacactaaatcagtaagttggcagcatcaccCGCAAAAGCGTTGCTCaa                                                                                                                           >  2:1261682‑M2/126‑143 (MQ=255)
                  cgtttgccgtgacgcagcaggccggcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGt                                                                                                                         <  2:1346139‑M2/20‑1 (MQ=255)
                     ttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGc                                                                                                                      <  2:503016‑M2/23‑1 (MQ=255)
                           ttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGata                                                                                                                <  1:932539‑M2/29‑1 (MQ=255)
                             acgcaccagcccgtcagtagcggagcaggagggacagctgatagaaacagaagccactggagcaccgcaaaaacaacatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATatc                                                                                                              <  1:309515‑M2/31‑1 (MQ=255)
                             acgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATatc                                                                                                              <  2:1099202‑M2/31‑1 (MQ=255)
                               gcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATatcat                                                                                                            >  2:834379‑M2/111‑143 (MQ=255)
                               gcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTACTTGATatcat                                                                                                            >  2:881021‑M2/111‑143 (MQ=255)
                                caccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatccgtcagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATatcatc                                                                                                           >  1:796060‑M2/110‑143 (MQ=255)
                                  ccaccccgacagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCtt                                                                                                         <  2:860944‑M2/36‑1 (MQ=255)
                                   caccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTc                                                                                                        >  1:597497‑M2/107‑143 (MQ=255)
                                    accccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCa                                                                                                       <  2:288785‑M2/38‑1 (MQ=255)
                                       ccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTACGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGc                                                                                                    >  1:1216887‑M2/103‑143 (MQ=255)
                                       ccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGGTATCATCTTCAGGc                                                                                                    >  2:101748‑M2/103‑143 (MQ=255)
                                       ccgtcagtagctgaacaggagggacagccgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGc                                                                                                    <  1:273023‑M2/41‑1 (MQ=255)
                                         gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCaa                                                                                                  <  2:1162461‑M2/43‑1 (MQ=255)
                                            agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGtt                                                                                               <  2:278373‑M2/46‑1 (MQ=255)
                                             gtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTg                                                                                              >  2:1343671‑M2/97‑143 (MQ=255)
                                             gtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagatggcagcatgaaaGGCCGAAGCGTTGCTCAACCTGCTAGACGCCAGCTTCAGGCAAGGTg                                                                                              >  2:596487‑M2/97‑143 (MQ=255)
                                              tagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGc                                                                                             >  1:1399399‑M2/96‑143 (MQ=255)
                                               agcggaacaggagggacagctgatagaaacagaagccactggcgcacctcaaaaacgccatcatgcactaagccagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCt                                                                                            <  1:1098849‑M2/49‑1 (MQ=255)
                                                      gaggagggacagctgatagaaacagaagcccctcgagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTACGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAAcc                                                                                     <  2:1386610‑M2/56‑1 (MQ=255)
                                                       aggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATTCTCTCCAGGCCAGTAGCTGCTAACCg                                                                                    >  1:386060‑M2/87‑143 (MQ=255)
                                                       aggagagacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCg                                                                                    <  1:729116‑M2/57‑1 (MQ=255)
                                                        ggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGt                                                                                   >  2:135510‑M2/86‑143 (MQ=255)
                                                          agggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTa                                                                                 <  2:1354076‑M2/60‑1 (MQ=255)
                                                           ttttcagctgatataaacagaagccactagagcacctcaaaaaaaccatcagacaccaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTAc                                                                                <  2:327085‑M2/61‑1 (MQ=255)
                                                           gggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTAc                                                                                <  2:327276‑M2/61‑1 (MQ=255)
                                                           gggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGATGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTAc                                                                                >  1:50469‑M2/83‑143 (MQ=255)
                                                                agctcatagaaacagacgccactgggtcacctcctccactccatcataccctaagtcagtaagttggcagcatcaccCGCCTCAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGtttt                                                                           <  2:602762‑M2/66‑1 (MQ=255)
                                                                  ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTAGGTTTTGt                                                                         >  1:419129‑M2/76‑143 (MQ=255)
                                                                  ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGt                                                                         >  2:1165570‑M2/76‑143 (MQ=255)
                                                                   tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTc                                                                        <  2:1261602‑M2/69‑1 (MQ=255)
                                                                     atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCATGCAAGTTCCTGATAACCGTTACGTTTTGTCcg                                                                      >  2:865635‑M2/73‑143 (MQ=255)
                                                                        gaaaccgactcaactgtagcaccccaaccacaccatcatccactaaatcagtaagttggcagcattaccCGCCCAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGTAAGTTGCTGATAACCGTTACGTTTTGTCCGCGt                                                                   <  1:118324‑M2/74‑1 (MQ=255)
                                                                        gaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCATTACGTTTTGTCCGCGt                                                                   >  1:688414‑M2/70‑143 (MQ=255)
                                                                         aaacagaagccactggagcacctcaaaaacaccatcatacactacatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCACGTTGCTTGATATCATCCTCCGGCAAGTTGCTGCTACCCGTTACGTCTTGCCCGCgtc                                                                  >  1:109207‑M2/69‑142 (MQ=255)
                                                                          aacggatgcctctggagcacctcaaagacgccatcatacactaagtcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTg                                                                 <  1:72590‑M2/76‑1 (MQ=255)
                                                                           acagaagccactggcgcacgtcaaaaacgccgtcatacgctaaatcagtaagttggccgcatctccCGTCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGa                                                                <  1:1243741‑M2/77‑1 (MQ=255)
                                                                            cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGAt                                                               <  2:745748‑M2/78‑1 (MQ=255)
                                                                            cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGAt                                                               <  2:733065‑M2/78‑1 (MQ=255)
                                                                             agaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTCGCTGATAACCGTTAAGTTTTGTCCGCGTTGAtt                                                              >  1:992919‑M2/65‑143 (MQ=255)
                                                                              gaagccactggagcacatcaaaaacaccatcatagactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTACCTGATAACCGCTACGTTTTGTATGCGTTGACTc                                                             >  1:232770‑M2/64‑143 (MQ=255)
                                                                               aagccactggagcaccgcaaaaacaccctcatacactaaatcagtaagttggcagcagcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCa                                                            <  2:519677‑M2/81‑1 (MQ=255)
                                                                                  ccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTAAAGTTGCTTGATATCGTCTTCAGCCAACTTGATGATAACCGGTACGTTGTGCCCGccgtgatgcgggt                                                         >  1:941241‑M2/60‑137 (MQ=255)
                                                                                     ctggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacaCGCCCAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCa                                                      <  1:868140‑M2/87‑1 (MQ=255)
                                                                                          gcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATc                                                 <  1:1186842‑M2/92‑1 (MQ=255)
                                                                                              ctcaataacaccaccatacgctacagcagcaagttggcagcatcacgCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTAAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTAt                                             <  1:1193072‑M2/96‑1 (MQ=255)
                                                                                              ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTAt                                             >  2:919908‑M2/48‑143 (MQ=255)
                                                                                               tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAGGCACTGCTCAAGTTGCTTGATATCATCTTCACGCAAGTTGCTGATAACCGTTACGTTTTGTCAGCGTTGATTCAGTTCAAGCATCGTCtt                                            >  1:475337‑M2/47‑143 (MQ=255)
                                                                                               tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAACCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAAACGTTACGTTTTGTTCGCGTTGATCAAGTTGAAAGATCGTAtt                                            >  1:622809‑M2/47‑143 (MQ=255)
                                                                                                  aaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTGAGTTGCAGGATCGTATTGAt                                         >  1:411529‑M2/44‑143 (MQ=255)
                                                                                                     acaccctcttactctaaattatttagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGTCAAGTTGCTGATATCCGTTACGTTTTGTCCTCGTTGATTCAGTTGCAGGATCGTATTGATGGc                                      <  1:766624‑M2/103‑1 (MQ=255)
                                                                                                      ctccttcctaacctacatcagtaagttggcggcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCg                                     <  1:1008157‑M2/104‑1 (MQ=255)
                                                                                                       accatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCga                                    >  1:992303‑M2/39‑143 (MQ=255)
                                                                                                       accatcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCga                                    >  2:410535‑M2/39‑143 (MQ=255)
                                                                                                         catcatacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCgaga                                  >  2:1330269‑M2/37‑143 (MQ=255)
                                                                                                          atcacacactccatcagtatgttggcagcatcactCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCCTCAGGCTAGTTGCTGGTAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGaa                                 <  1:95677‑M2/108‑1 (MQ=255)
                                                                                                              tacactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGAATCGa                             <  2:943590‑M2/112‑1 (MQ=255)
                                                                                                               acactaaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCCCGTTGATTCAGTTGCACGATCGTATTGATGGCGAGAATCGaa                            >  1:1446074‑M2/31‑143 (MQ=255)
                                                                                                                cactaactcagtacgttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTCGATATCATCTTCAGGCAAGTTGCTGATAACCGTTTCGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGAATCGAAt                           <  2:752728‑M2/114‑1 (MQ=255)
                                                                                                                   taaatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCCGGCGAGTTGCTGATAACCGTTACGTTTTGTCCTCGTTGGTTCAGTTGCAGGATCGTATTGATGTCGAGACTCGCATgtg                        >  2:157685‑M2/27‑142 (MQ=255)
                                                                                                                    agatcagtaaggtggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGAATCGATTGTcc                       <  2:1447312‑M2/118‑1 (MQ=255)
                                                                                                                    aaatcattaagttgggagcatccgcCGTCTATGCGTTGCTGAAGTTGCTTGATATCATCTTCAGGCAAGTGGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGAATCGAATGTcc                       <  1:941449‑M2/118‑1 (MQ=255)
                                                                                                                     aatcagtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGCATCGAATGTCCg                      >  1:521094‑M2/25‑143 (MQ=255)
                                                                                                                         agtacgtttgcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGAATCGAATGTCCGCaaa                  <  1:1178172‑M2/123‑1 (MQ=255)
                                                                                                                         agtaagttggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGAATCGAATGTCCGCaaa                  <  2:1369546‑M2/123‑1 (MQ=255)
                                                                                                                             agttggcagcatcaccCGCCTAAGCGCTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGAATCGAATGTCCGCAAACAAt              <  2:1433006‑M2/127‑1 (MQ=255)
                                                                                                                                 ggcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTATGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGAATCGAATGTCCGCAAACAATaaaa          <  2:1187162‑M2/131‑1 (MQ=255)
                                                                                                                                  gcagcatcaccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGAATCGAATGTCCGCAAACAATAAAAt         >  2:1152005‑M2/12‑143 (MQ=255)
                                                                                                                                      catcaccCGCCTAAGCGTGGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGAATCGAATGTCCGCAAACAATAAAATGATc     <  2:597497‑M2/136‑1 (MQ=255)
                                                                                                                                         caccCGCCTAATCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGAATCGAATGTCCGCAAACAATAAAATGATCttt  <  1:1073803‑M2/139‑1 (MQ=255)
                                                                                                                                         caccCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGAATCGAATGTCCGCAAACAATAAAATGATCttt  >  1:1199194‑M2/5‑143 (MQ=255)
                                                                                                                                             |                                                                                                                                          
TCATATCTTTTGCCGAGAGTACAACAAACGCGTTATCTGCATCGTTATCACTCAGCGCCAGAATGGCCCGGCAACGATCGATTCCCGCTTTCTTTAATACAGAACTGTCATTACTGTCACCGGGGATAACATCAGCATTATCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGAATCGAATGTCCGCAAACAATAAAATGATCTTT  >  NC_000913/1309264‑1309543

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.