New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 1396531 = | NA (NA) | 25 (0.310) | 5/272 | 11.2 | NA | coding (456/1017 nt) | insH1 | IS5 transposase and trans‑activator |
? | NC_000913 | = 1428264 | NA (NA) | coding (463/981 nt) | insH1 | IS5 transposase and trans‑activator | |||||
Rejected: Coverage evenness skew score above cutoff. |
CCGCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCT > NC_000913/1428135‑1428359 | ccGCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGcgg > 1:940470/1‑141 (MQ=17) gcgGTGGTGACCAGGCTGTGGGACAGGCCACTTTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGCTGCTACTCTGTGTTCATgtacgagcccgc > 1:756074/1‑132 (MQ=1) cAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCGTTCTTGGTCTGATGCAGCACCGGATCGGGTCGGTGCTCTTTGTTGGTGGTAGAGATGGGTGccgtgatga > 1:1302328/1‑136 (MQ=11) ctTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCAGCTCCGGATCGCGTTGCTGCGCTTTGTTCTTCGTAGAGCTGGGTGCCTCAATGATGGCGGCagctagcatggtgc > 2:1388954/1‑130 (MQ=11) ttGGCATCGACACCAATGTGCGCCTCCATGCCAAAGTGCCACTGATGGCCATTCTTGGTCTGGTGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTGGGTGCAGCTCGGTGCTCCAAAGATGGGGGCATccacgccggtgcc > 1:634720/1‑134 (MQ=11) gCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCTTGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCt < 2:940470/143‑1 (MQ=255) | CCGCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCT > NC_000913/1428135‑1428359 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |