New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1396531 =NA (NA)25 (0.310) 5/272 11.2 NA coding (456/1017 nt) insH1 IS5 transposase and trans‑activator
?NC_000913 = 1428264 NA (NA)coding (463/981 nt) insH1 IS5 transposase and trans‑activator
Rejected: Coverage evenness skew score above cutoff.

CCGCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCT  >  NC_000913/1428135‑1428359
                                                                                                                                 |                                                                                               
ccGCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGcgg                                                                                    >  1:940470/1‑141 (MQ=17)
  gcgGTGGTGACCAGGCTGTGGGACAGGCCACTTTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGCTGCTACTCTGTGTTCATgtacgagcccgc                                                                                  >  1:756074/1‑132 (MQ=1)
             cAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCGTTCTTGGTCTGATGCAGCACCGGATCGGGTCGGTGCTCTTTGTTGGTGGTAGAGATGGGTGccgtgatga                                                                       >  1:1302328/1‑136 (MQ=11)
                                  ctTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCAGCTCCGGATCGCGTTGCTGCGCTTTGTTCTTCGTAGAGCTGGGTGCCTCAATGATGGCGGCagctagcatggtgc                                                  >  2:1388954/1‑130 (MQ=11)
                                   ttGGCATCGACACCAATGTGCGCCTCCATGCCAAAGTGCCACTGATGGCCATTCTTGGTCTGGTGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTGGGTGCAGCTCGGTGCTCCAAAGATGGGGGCATccacgccggtgcc                                                 >  1:634720/1‑134 (MQ=11)
                                                                                  gCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCTTGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCt  <  2:940470/143‑1 (MQ=255)
                                                                                                                                 |                                                                                               
CCGCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGATGGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCT  >  NC_000913/1428135‑1428359

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.