New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1979489	1 (0.010)	106 (1.260)	59/284	0.3	99.1%	intergenic (‑274/‑264)	insA/uspC	IS1 repressor TnpA/universal stress protein
	?	NC_000913	= 2290111	NA (NA)					intergenic (‑32/+1)	insH1/yejO	IS5 transposase and trans‑activator/pseudogene, autotransporter outer membrane homology,putative transport, Not classified, putative ATP‑binding component of a transport system

AGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCCGGA  >  NC_000913/2289971‑2290253                                                                                                                                             |                                                                                                                                                aGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCAt                                                                                                                                               <  2:65587/143‑1 (MQ=31)  gAAAATCTCTTTTCTGGTCTGACGGTACTATCTCCACAACACTCTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATa                                                                                                                                              >  1:446886/1‑143 (MQ=11)  gAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATa                                                                                                                                              >  2:1134153/1‑143 (MQ=32)  gAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATa                                                                                                                                              >  2:838785/1‑143 (MQ=32)       tctcTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGCTGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTATTCGCACCTTCCATAACGCt                                                                                                                                         <  1:167862/143‑1 (MQ=255)         tctTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGt                                                                                                                                       >  1:628487/1‑143 (MQ=37)          ctTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTa                                                                                                                                      <  1:696102/143‑1 (MQ=38)          ctTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCATGTTCTATGGCTCCAGAGGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTa                                                                                                                                      >  1:1193159/1‑143 (MQ=255)          ctTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGGTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTa                                                                                                                                      <  1:964462/143‑1 (MQ=38)          cgtttCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTa                                                                                                                                      <  2:1381080/141‑1 (MQ=38)            tttCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGc                                                                                                                                    <  2:1212511/143‑1 (MQ=40)               cTGGTCTGACGGCGCTTACTGCTGGATTCACTGTCGACGTCGAAAACCTAGGGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGccac                                                                                                                                 <  2:324711/143‑1 (MQ=14)                  gTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAg                                                                                                                              >  2:1026312/1‑143 (MQ=255)                   tCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGACGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGCCTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGa                                                                                                                             >  1:587222/1‑143 (MQ=255)                       aCGGCTCCTACGGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑g                                                                                                                        <  1:1091912/143‑1 (MQ=255)                       aCGGCGCTCACTCCCGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑g                                                                                                                        <  2:1884/143‑1 (MQ=255)                        cggcggCTACTGCTGAATTCACTTTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑Ga                                                                                                                       <  1:1317809/143‑1 (MQ=255)                           cgcgTACTGCTGAATTCACTATCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCAGACCTTCCATAACGCTGAAGCCACCAGAACA‑Gatat                                                                                                                    >  1:592253/1‑143 (MQ=17)                               tACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCg                                                                                                                >  2:911632/1‑143 (MQ=255)                               ggctgctgGGTTCCCTGTCTGCGAAGGTAAGTTGATGAGTCATGATGAACCCTGTTCTATGGCTGCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCGGTAGCCACCAGAACA‑GATATTGCg                                                                                                                <  1:1430639/141‑1 (MQ=17)                                 ctgctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATCACGCAGTAACCACCAGAACA‑CATATTGCGGa                                                                                                              >  1:3385/1‑143 (MQ=255)                                  tgctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACGCTGTAGCCACCAGAACA‑GACATTGCGGaa                                                                                                             >  2:247438/1‑143 (MQ=255)                                  tgctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGaa                                                                                                             <  1:592152/143‑1 (MQ=255)                                  tgctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGaa                                                                                                             >  2:1349732/1‑143 (MQ=255)                                   gctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAGCA‑GCTATTGCGGAAc                                                                                                            >  2:653390/1‑143 (MQ=255)                                   gctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GCTATTGCGGAAc                                                                                                            >  2:943682/1‑143 (MQ=255)                                     tgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGa                                                                                                          >  1:1389891/1‑143 (MQ=255)                                              tGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGCACGACAAAGAGaa                                                                                                 >  2:1065207/1‑143 (MQ=255)                                              tGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGCACGACAAAGAGaa                                                                                                 >  1:625986/1‑143 (MQ=255)                                              tGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGaa                                                                                                 >  2:653036/1‑143 (MQ=255)                                              tGTCGGCGAAGGTAAGTTGATGACTCATGACGAACCCTGTTCTATGGCTCCAGATGACAAACATGCTCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAagagca                                                                                                 >  1:1091123/1‑141 (MQ=255)                                               gTCGGCGGAGGTAAGTGGATGACTCATGAACAACCCTTTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGaaa                                                                                                <  1:1380725/143‑1 (MQ=21)                                                   gCGAAGGTAGCTTGTTCCGTCATGGTGAACCCTGTTCTATTGCTCCAGATGACAAACATGATCTCATATCAGCTACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGa                                                                                            <  1:486812/143‑1 (MQ=21)                                                   gCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGa                                                                                            <  2:27933/143‑1 (MQ=255)                                                         gTAAGGTGATGGCACGTGATGAACCCTGGTCTATGGCTCCAGATGACAAACATGATGTCATATCAGGGACTGGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGa                                                                                      <  1:250145/143‑1 (MQ=25)                                                           aaGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGAtt                                                                                    <  1:73404/143‑1 (MQ=255)                                                              ttGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGAt                                                                                 >  1:9537/1‑143 (MQ=255)                                                              ttGATGACTCATGATGAACCCTGTTCTATGGCCCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGAt                                                                                 >  2:210267/1‑143 (MQ=255)                                                                 atgaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACCAACATGACCTCATCTCAGGGACTTGTCAGCACCTTCCCTAACGCTGTAGCCACGAGCAAA‑GACATTGCGGCACGAAAAAGCGAAAAAGAACCAGGTTggtacg                                                                              >  1:630371/1‑138 (MQ=17)                                                                   gaCTCGTGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGATGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCAtt                                                                            >  1:1203870/1‑143 (MQ=255)                                                                     cTCATGATGAACCCGGGTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGa                                                                          <  2:494266/143‑1 (MQ=255)                                                                      tCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACCAAGAGAAACCGAACCAGATTGCTGCATTGac                                                                         >  1:1228581/1‑142 (MQ=255)                                                                       cATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGc                                                                        >  1:1229570/1‑143 (MQ=255)                                                                          gatgaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACAAGGTTGATGCATTGAGCttt                                                                     >  1:1433285/1‑143 (MQ=255)                                                                          gatgaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCATCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCatt                                                                     >  1:924745/1‑143 (MQ=255)                                                                              accccTGTTCTATGGCTCCGGAGGACAAACATGATCTCCTATCAGGGACTTGTTCGCACCTGCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATc                                                                 <  1:1300191/141‑1 (MQ=255)                                                                              aaCCCTGTTCTATGGCTCCAGATGACCAACATGACCTCATAGCAGGGACTGGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATc                                                                 <  1:810315/143‑1 (MQ=255)                                                                                cccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACC‑GATATTGCGGGACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTATCAGCCt                                                               >  2:444345/1‑143 (MQ=255)                                                                                 ccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTa                                                              >  2:838448/1‑143 (MQ=255)                                                                                      tCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGCCAAAGAGAAACAGAACCAGACGGATGCATGGAGCTCTCCTCCCCTGaaa                                                         >  2:316098/1‑143 (MQ=25)                                                                                       cTAAGGCTCCAGATGACAAACAGGATCTCATGTCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAaat                                                        <  2:597116/143‑1 (MQ=255)                                                                                         aTGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAaatta                                                      >  2:1015830/1‑143 (MQ=255)                                                                                         aTGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAaatta                                                      >  2:736746/1‑143 (MQ=255)                                                                                         aTGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCG‑AGCAGAAGCAAGGGCGTTGGTAAAATACTATTGAACTGGGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAaatta                                                      >  2:1062061/1‑143 (MQ=9)                                                                                            actgaaGATGAAAAACAGGACGTCATAGCAGGGACTTGTGCGCACCTTCCATAACGCTGTAGCCACCAGCACA‑GATATTGCGGAACGACAAAGAGAAACAGTTCCAGATTGATGCATTGAGCTTTCATCCTATGAaattaatt                                                   <  2:721927/138‑1 (MQ=255)                                                                                             cTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTg                                                  >  1:50918/1‑143 (MQ=255)                                                                                              tCCAGATGACAACCATGATCTCATATCAGGTACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGc                                                 <  1:1075337/143‑1 (MQ=255)                                                                                                     gACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTaaa                                          <  1:81667/143‑1 (MQ=255)                                                                                                          aCATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCAt                                     >  2:1101989/1‑143 (MQ=255)                                                                                                          aCATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACACTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCAt                                     >  1:1265050/1‑143 (MQ=255)                                                                                                            aTGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTg                                   <  1:1110042/143‑1 (MQ=255)                                                                                                            aTGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTg                                   >  1:1196781/1‑143 (MQ=255)                                                                                                            aTGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTg                                   >  1:461263/1‑143 (MQ=255)                                                                                                             tGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTgg                                  <  2:67679/143‑1 (MQ=255)                                                                                                               aTCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGt                                <  2:1304331/143‑1 (MQ=255)                                                                                                                 ctcATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACCGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTAc                              >  1:544354/1‑143 (MQ=255)                                                                                                                  tcATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGACCGACAACGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACa                             >  2:543732/1‑143 (MQ=255)                                                                                                                  tcATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACa                             >  1:196250/1‑143 (MQ=255)                                                                                                                  tcATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACa                             >  1:254153/1‑143 (MQ=255)                                                                                                                    atatCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGa                           <  2:627574/143‑1 (MQ=255)                                                                                                                     tatCAGGGACTTGTTCGCAGCTTTCATAACGCTGTAGTGATCGGTGCA‑GATGTTGCTGAGCGACAAAGAGGAACAGAAACAGATTGATGCATTGAGCGTTCATCCGATAAAAATAATTGCTGTTAAAAGCATTGGGTACAGaa                          <  1:709850/143‑1 (MQ=255)                                                                                                                          gggACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑AGTTCTGCAGTATTGCAAAGAGAAACACAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATAc                     <  1:1026312/143‑1 (MQ=255)                                                                                                                           tgactgtttCGGACCTCCCACAACGCTGTGGGCACGCGAACA‑GATAGTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCATTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATAcc                    <  1:526114/136‑1 (MQ=255)                                                                                                                           cgaccggtgcGCACCATCCACAACGCTATAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGTGTACAGAAAATAcc                    <  1:653390/134‑1 (MQ=255)                                                                                                                            gACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGGACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTAAACACTATGGTGTTAATTGCTGATAAAAGCATTGGGTACAGAAAATAgcc                   >  1:1405421/1‑143 (MQ=255)                                                                                                                             aCTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATAGTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCAGTGAGCTTTCATCCGATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCa                  <  1:678381/143‑1 (MQ=255)                                                                                                                              cTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCAt                 <  2:827946/143‑1 (MQ=255)                                                                                                                              cTTGTTCGAACCTTCAAGTTCCCTGCAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGATACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCAt                 <  2:725903/143‑1 (MQ=255)                                                                                                                               ttGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTCTGCAAGTAATTGCTGGTAACAGCATTGGGTCCCGAAAATACCCATa                >  2:1052614/1‑143 (MQ=255)                                                                                                                               ttGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATa                <  2:446886/143‑1 (MQ=255)                                                                                                                               ttGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATa                >  1:1184770/1‑143 (MQ=255)                                                                                                                               ttGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATCGATGCATGGAGCTTGCACCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATa                >  2:1289758/1‑143 (MQ=255)                                                                                                                                tgtgCGCACCTCCCATAACGCTGTAGCCCCCAGGACA‑GATATCGCGGAACGACAAAGAGAAACAGAACCAGATGGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAg               <  2:545893/143‑1 (MQ=255)                                                                                                                                  ttCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCCTCCTATGAAATTAATGGCTGTTAAAAGCATTGGGTACAGAAAATACCCAAAGCt             >  1:1439970/1‑143 (MQ=255)                                                                                                                                     gCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCa          >  2:1172922/1‑143 (MQ=255)                                                                                                                                       aCCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGCTGCATTGAGCTTTCATCCTATGAACTTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCtaaata        >  1:410358/1‑138 (MQ=255)                                                                                                                                        ctttCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAACTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATAc       <  2:1241588/141‑1 (MQ=255)                                                                                                                                        ccTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATAc       >  2:1320333/1‑143 (MQ=255)                                                                                                                                        ccTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATAc       >  2:1224053/1‑143 (MQ=255)                                                                                                                                        ccTTCCATAACGCTGTAACCACCAGAACA‑GATATTGCGGCACGACACAGAGAAACAGAACCAGATTGATACATTGAGCTTTCATCCTATGAAATTAATTGATGTTAAAAGCATTGGGTACAGAAAATACCGATAGCTCCATaa       >  1:200313/1‑142 (MQ=255)                                                                                                                                             cATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCCGGa  >  2:1351129/1‑143 (MQ=255)                                                                                                                                             |                                                                                                                                                AGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACA‑GATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCCGGA  >  NC_000913/2289971‑2290253

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.