New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3946052	2 (0.040)	6 (0.130)	5/276	6.2	75.5%	noncoding (2350/2904 nt)	rrlC	23S ribosomal RNA of rrnC operon
	?	NC_000913	= 3946068	NA (NA)					noncoding (2366/2904 nt)	rrlC	23S ribosomal RNA of rrnC operon
Rejected: Coverage evenness skew score above cutoff.

ACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3945907‑3946052 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcTCGCGCCGTCACGCTCGCAGTCAAGCTGGCTTATGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTG  <  NC_000913/3946068‑3945928                                                                                                                                                                                                                                                                                                 gcgcggggTCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGAC                                                                                                                                                  <  1:525377/135‑1  tCCGTGATCCGGGTTGCTGACAGTGTTTGGTGGGTAGTTTGACTGGGGCTGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGATAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACT                                                                                                                                                 <  1:827079/142‑1  cccgtaggCCGGGGTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACT                                                                                                                                                 <  2:33250/135‑1                    GACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGGAGGGTGGCTGATCCTGGTCGGACATCAGGAGGTTAGTGCAGTGGGATAAGCCAGCTTGAGTGCGCGagtgcagagcggg                                                                                                                               >  2:90210/1‑130                       AGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCTCGCGCCGTCACGCTCGCA                                                                                                                            <  1:77405/143‑1                          GTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCTCGCGCCGTCACGCTCGCAGTC                                                                                                                         <  2:364941/143‑1                              GGTGGGTAGGTTGGCGGGGGCGGTCGCCTCCTAAAGAGTAACGGAGGAGCACGAGGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTCGTGCAATGGCATAAGCCAGCTTGACGGCTCGCGCCGTCACGCTCGCAGTCAAGC                                                                                                                     <  2:31710/143‑1                                           ACTGGGGCGGTCTCCCCCTAAAGAGTATCGGAGGGGCCCGAAGGTTGGCTGATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCTCGCGCCGTCACGCTCGCAGTCACGCTGGCTTATGCCAT                                                                                                        <  2:23366/143‑1                                              GGGGCGGTCTCCTCCGAAAGAGGAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCTCGCGCCGTCACGCTCGCAGTCAAGCTGGCTTATGCCATTGC                                                                                                     <  1:398952/143‑1                                                                                                                                               CTGCTCGCGCCGTCACGCTCGCAGTCAAGCTGGCTTATGCCCTTGCACTAACCTCCTGATGTCCGACCAGGATTCGCCAACCTTCGTGCTCCTCCGTTACTCCTCAGGCGGAGACCGCCCCAGTCCACCTACCCACCAGACAC    >  2:769696/1‑143                                                                                                                                               CTGCTCGCGCCGTCACGCTCGCAGTCAAGCTGGCTTATGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACAC    >  2:95643/1‑143                                                                                                                                               CTGCTCGCGCCGTCACGCTCGCAGTCAAGCTGGCTTATGCCATTGCACTAACCTCCTGATGTCCGACCAGGACTAGCCAACCCTCGTGCTCCTCCGTTACTCTTTAGGAAGAGCCCGCACCAGTCAAACTACCCACCAGACAC    >  2:28542/1‑143                                                                                                                                                 GCTCGCGCCGTCACGCTCGCAGTCAAGCTGGCTTATGCCATTGCACTAACCTCCTGCTGTCCGACCAGCATTAGCCAACCTTCGTGCTCCACCGTTAACCTTTAGGAGGAGACCGCCCCACCCAAACTCCCCACCAGACACgg  >  2:342149/1‑141                                                                                                                                                 GCTCGCGCCGTCACGCTCGCAGTCAAGCTGGCTTATGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTCCACTTTACGATGAGTCCGCCCAAGTCAAACTACCCACCAGACACTG  >  1:713177/1‑143                                                                                                                                                 GCTCGCGCCGTCACGCTCGCAGTCAAGCTGGCTTATGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTG  <  2:328821/143‑1                                                                                                                                                                                                                                                                                                 ACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3945907‑3946052 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcTCGCGCCGTCACGCTCGCAGTCAAGCTGGCTTATGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTG  <  NC_000913/3946068‑3945928

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.