New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	781369 =	42 (0.850)	7 (0.140) +G	3/282	7.6	14.8%	noncoding (1/76 nt)	lysZ	tRNA‑Lys
	?	NC_000913	= 2521126	39 (0.790)					intergenic (+2/‑45)	valX/valY	tRNA‑Val/tRNA‑Val
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAA  >  NC_000913/781229‑781505                                                                                                                                             |                                                                                                                                         aCATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATggg                                                                                                                                        <  1:218111/143‑1 (MQ=255)   aTCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTc                                                                                                                                      >  1:651929/1‑143 (MQ=255)   aTCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGCATGGGTc                                                                                                                                      >  1:569321/1‑143 (MQ=255)    tCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAACCCTTCAGGTAACACCCGTATGGGTCg                                                                                                                                     >  2:62923/1‑143 (MQ=255)       aaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCCTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTa                                                                                                                                  <  2:285750/143‑1 (MQ=255)          cccgATGGTACGCGCGAAGGCTAACGTTGCCTCAGAAACGGCCCGAAGACCGAGAGAGGCGAGTCCTCCTGCACGACCCACCAATCTTAAAGATTGGCCAAGTGTAATAGTCTTTCAGGTAACACCCGTATGGGTCGTTAGCt                                                                                                                               <  2:418408/140‑1 (MQ=255)            ataTGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCa                                                                                                                             <  1:681581/141‑1 (MQ=255)            agctGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGAACGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAAGCTCTCAGGTAACACCCGTATGGGTCGTTAGCTcc                                                                                                                             >  1:673341/4‑142 (MQ=25)              aTGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCGCAGt                                                                                                                           >  1:5603/1‑143 (MQ=255)                  gaaccGTGAAGGATAACGTGGCGCCAGCAACGGCCCGTCGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCGCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTGGGt                                                                                                                       <  2:169690/139‑1 (MQ=37)                         gAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAg                                                                                                                <  1:813978/143‑1 (MQ=255)                          aaGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGt                                                                                                               <  1:792554/143‑1 (MQ=255)                             gATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGa                                                                                                            >  1:548958/1‑143 (MQ=255)                                   gTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCACATGGGTCGTTAGCTCAGTCGGTAGAGCAGTTGACTTTTa                                                                                                      >  2:153738/1‑143 (MQ=255)                                    ttGGGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTaa                                                                                                     <  1:622022/143‑1 (MQ=255)                                        gcCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCaa                                                                                                 <  1:703780/143‑1 (MQ=255)                                         ggcgCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAAt                                                                                                >  1:357215/4‑143 (MQ=255)                                         ccAGCAACGGCCGGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAACGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAAt                                                                                                <  1:301698/143‑1 (MQ=255)                                         ccAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGCGTAAAAATCTCTCAGGTAACACCCGTATGGGGCGTTGGCCCAGTTGGTAGAGCAGCTGACTTCTCATccac                                                                                                >  2:538091/1‑140 (MQ=25)                                         ccAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGAGTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAAt                                                                                                <  1:717963/143‑1 (MQ=255)                                                   cccGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAgg                                                                                      <  1:342068/143‑1 (MQ=255)                                                             cggcgaagcgaGTCAGCTTGCACGACCCACCAATCATAAAGAGTGGCCCCGAGTAAAGATCTTGCAGGTAACACCCGTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCt                                                                            <  2:495832/141‑1 (MQ=25)                                                               gcgaagcgaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGc                                                                          >  2:475112/1‑143 (MQ=255)                                                                cgaagcgaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCa                                                                         <  1:433991/143‑1 (MQ=255)                                                                    gcgaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCATTAGCTCAGTTGGTAGAGAAGTTGACTTTTAATCAATTGGTCGCAGAATCGAATACTGCAAGAc                                                                     >  2:243797/1‑143 (MQ=37)                                                                           aTCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTCGGTAGAGCAGTTGGCTTGTAATCCGTTGGTCGCAGGGTCGAGTCCGGccgggtcgagcac                                                              >  2:368576/1‑131 (MQ=255)                                                                            tCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGGTCGAATCCTGCACGGCCCACCAAt                                                             >  2:351659/1‑143 (MQ=255)                                                                              cTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAAttt                                                           >  1:704894/1‑143 (MQ=255)                                                                                         accaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGATGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGGATCCTGCACGACGCACCAATTTAAGGGTGGGTa                                                >  1:225372/1‑143 (MQ=25)                                                                                          ccaATCTTAAAGATTGGCCCCGAGTCAAAATCTGTCGGGTAACTCCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTAc                                               <  1:155637/143‑1 (MQ=255)                                                                                                ttAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCGGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTag                                         >  1:317809/1‑143 (MQ=255)                                                                                                         ggCCCGGGGTAAACATCGTTCACGTCACACCCGTATGGGTCGTGAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAACGGTGGTTACTGGTAGAGAACGTGa                                <  1:704510/143‑1 (MQ=18)                                                                                                          ggccggAGTGACAATCGTGCCGGTAACGCCCGTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGaa                               <  2:561642/138‑1 (MQ=18)                                                                                                                      aaactgtCAGGTAACGCCCGGAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGc                   <  1:142234/137‑1 (MQ=21)                                                                                                                       aTCTTTCAGGTACCACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCATCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCg                  <  1:820827/143‑1 (MQ=255)                                                                                                                       aTCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCg                  >  2:521404/1‑143 (MQ=255)                                                                                                                                gTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACg         >  1:720319/1‑143 (MQ=255)                                                                                                                                gTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACg         >  1:404728/1‑143 (MQ=255)                                                                                                                                gTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACg         >  2:715978/1‑143 (MQ=255)                                                                                                                                  accccccGTCTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAAGCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGc       <  2:740202/139‑1 (MQ=255)                                                                                                                                  acccaccactcgggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAAGATGGATACTGGATGTGAAGGGGGAGGAAAAAGGTGGGTTCACAACggg       >  2:42332/12‑142 (MQ=11)                                                                                                                                   acacCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTCGCAACGGcc      >  1:540662/1‑143 (MQ=255)                                                                                                                                       ccGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGAGGTTACTGGTGGAGAACGTGAAGGATAACGTTGCGTTAGCTACGGCCCGaa  >  1:29050/1‑143 (MQ=255)                                                                                                                                             |                                                                                                                                         ACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAA  >  NC_000913/781229‑781505

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.