| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 2 (0.040) | 49 (0.990) | 43/284 | 0.1 | 96.1% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 2 (0.040) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
TATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGC > NC_000913/4001504‑4001780 | tATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGCAGACATCGAAGCATCGGCACGTTTCTTTGAAGGCGACGACGGCCTGCATctc > 2:730289‑M1/1‑140 (MQ=255) aTCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGGCGGCCTGCATctccttcttctt > 2:430834‑M1/1‑131 (MQ=255) tCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttga < 1:315552‑M1/143‑19 (MQ=255) gAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCCCGTTTCTTTGAAGACGCCGACGGCCTGCATctccttcttcttctttgcag > 1:108728‑M1/1‑123 (MQ=255) gAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCAGCGCGGAACTGGAAGACATCGAAGCATCGGCGCGGCTCTTGGATGACGACGACGGCCTGCCTctcctccgtctgctttgctg > 1:819511‑M1/1‑123 (MQ=255) aaCCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGGTCCTTTGACGACGACGACGGCCTGCGTccccttcttcttctttgacga > 2:209042‑M1/1‑122 (MQ=255) cGGACGACGACGAGCGACTGCGCGTACAATCTGAGCTTGGCCAGAGCCTGGCAACCCGCGCGGAACTGGAAGACATCGAAGCATCGGCACGTTTGTTTGAAGACGACGGCGGCCTGCATctgcgtcttccacttttaaggtgc > 2:200075‑M1/1‑119 (MQ=255) cGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttctcctttgaagatgc > 1:529247‑M1/1‑119 (MQ=255) cGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACCACGGCCTGCATctccttcttcttctttgaagatgc > 1:71733‑M1/1‑119 (MQ=255) acggcgacgAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcgga < 2:708647‑M1/143‑28 (MQ=255) gacgacgaGCGACTGCGCGTACAATCTGACCTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaag < 1:259630‑M1/143‑30 (MQ=255) acgacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaaga > 1:520158‑M1/1‑113 (MQ=255) gacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCGTctccttcttcgtctttgaagatgcgggaggtc > 1:64339‑M1/1‑111 (MQ=255) gacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagctgcggaagctc > 1:670922‑M1/1‑111 (MQ=255) aGCGACTGCGCGTACAATCTGAACCTGGCCTGAGCCGCGCAACCCGCCCGCAACTGGAAGACATCGAAGCATCGACACTTTTCTTTGAAGACGACGACTTCCTGCAT‑‑‑‑‑CTCCTTCGTCTTCTTTGAAGATGCGGAAGATCACGc < 1:651706/143‑1 (MQ=255) gCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgacgatgcggaagctcccccc > 1:200020‑M1/1‑106 (MQ=255) gCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAActccttcttcttctttgaagatgcggaagctcacgcc > 1:652907‑M1/1‑106 (MQ=255) gggcggcgcgggcaACCTGAACTTGGCGAGGGCCTGGCAACCCGCCCGGAGCTGGAAGACATCGAAGCGTCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccg < 1:689157‑M1/138‑39 (MQ=255) cTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagaggcggaagatcacgccggca > 1:144615‑M1/1‑102 (MQ=255) cgcgTACCATCTGAGCTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaact < 2:238726‑M1/143‑45 (MQ=255) cgcgTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaact > 1:739343‑M1/1‑99 (MQ=255) tACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGGCGGCCTGCATctccttcttcttctttgaagatgcggacgagcacgccggtaactccac > 1:153725‑M1/1‑95 (MQ=255) aCAATCGGGCCTTGGCCCGAGCCTGCCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGTCACGTTTGTTTGAAGACGACGACGGCCTGCATctccttcttctttgaagatgcggaagatcacgccggtaactccactgtg < 2:710667‑M1/143‑50 (MQ=255) tCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccagtgtgg > 2:171613‑M1/1‑90 (MQ=255) tGAACTTCGCCAGAGCCTTGCAACCCCCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggca < 2:714750‑M1/143‑56 (MQ=255) gAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcaagccggtaactccactgtgtcat > 2:485783‑M1/1‑87 (MQ=255) aCTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACAGACCGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcattt < 1:670049‑M1/143‑59 (MQ=255) ctgagtcTGGCAATCCGCCCGGAACAGGAAGACATCGAAGCATCGGCACGTTTCGTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatcc < 1:594420‑M1/141‑66 (MQ=255) cAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgtggaagatcacgccggtaactccactgtggcatttaccatcc > 1:359953‑M1/1‑78 (MQ=255) ccTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgat > 1:839104‑M1/1‑73 (MQ=255) tGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaaggtgcggaagctcactccggtaactccactgcggcatttagcatccgagagca > 2:91978‑M1/1‑71 (MQ=255) gcccgtccgGAGCCGTAAGCCCTCGATGCATCGGCACGTTTCTTGGAAGACGACGGCTGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATcacggatggtaaat < 2:849486/142‑14 (MQ=255) ccgcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctc > 1:451169‑M1/1‑64 (MQ=255) aaCTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactct > 1:188558‑M1/1‑56 (MQ=255) tGGAAGACATCGACGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcg < 2:261885‑M1/143‑91 (MQ=255) ggAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatgggcggctgtttactctgcgt > 2:623559‑M1/1‑52 (MQ=255) aaGCCATGGAAGCATCGGCAGGTTTCTTTGAAGACGACGACGGCCTGCATttccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtga < 2:561029‑M1/143‑94 (MQ=255) aTCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttcctctgcgtgagcgtg > 1:15888‑M1/1‑45 (MQ=255) gAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgcagatgcggaaggtcacggcggtaactccactgtgccatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaac > 2:349366‑M1/1‑42 (MQ=255) gCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgggcgtgaactgc > 1:858380‑M1/1‑39 (MQ=255) cACGTTCCTTTGCAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcgcaacatcacgccggtaacgccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttt < 1:196037‑M1/143‑112 (MQ=255) gTTTCTTTGAAGACGACGACGGCCTGCATctccttcttattctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcggcggtttactctgcgtgagcggggactgcccgcttttcg > 2:354626‑M1/1‑29 (MQ=255) tttCTTTGAAGACGACGACGTCCTGCATcttcttcttcttcttagaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgt < 1:42162‑M1/143‑116 (MQ=255) tCTTTGGAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtct < 2:385417‑M1/143‑118 (MQ=255) ttGAAGACGACGACGGCCTGCAGctccgtcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgta < 2:262196‑M1/143‑121 (MQ=255) gAAGACGACGACTGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttatcatccgtaatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatc < 1:596961‑M1/143‑123 (MQ=255) gacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgggcgtgacctagctgcgtttcgtctgttgaggggcccac > 1:619694‑M1/1‑12 (MQ=255) gacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtgtcggatgcgtg > 2:538927‑M1/1‑12 (MQ=255) acgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgc < 1:294107‑M1/143‑133 (MQ=255) ccTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccgctgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgctcttcgtctgtatcgtatgcgtgcccgt > 1:604739‑M1/1‑7 (MQ=255) cTGCATctccttcttcttcattgaagatgaggaagatcacgccggtaactccactgtggcagttaccatccgtgatgctagagtgtttactctgcgtgagcgtgaactgaccgcttgtcgtccgcatcgaatgcgtgagggtg > 2:99570‑M1/1‑6 (MQ=255) | TATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGC > NC_000913/4001504‑4001780 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |