New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 6423647 (0.950)3 (0.060) 3/278 7.5 5.8% coding (1545/2352 nt) polB DNA polymerase II
?NC_000913 = 64259 51 (1.060)coding (1522/2352 nt) polB DNA polymerase II
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CCTTTCAGCCAGACAAACGTTGAGTCGGTATCGCCGTAGATAACGTCGTAGCCCTGTGCTTCAATCAACGCTTTGGTTTGCCGCATGATCTGATGACCACGCATGGTGATCGACGATGCCAGCCGCGGATCGAAGAAGCGGCAGGCGGTGGTGCCGAGCACGCCATAAAAGGCATTCATGATGATTTTCAGCGCCTGCGACAGCGGTTTGTTACCCTGGCGTTTGGCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGC  >  NC_000913/64117‑64401
                                                                                                                                              |                                                                                                                                              
cctgtcggcgggACAAGCGTTGAGGCGGTATCGCCGTAGATAACGTCGTAGCGCTGTGCTTCAATCAACGCTGTGGTTTGCCGCATGATCTGATGACCACGCATGGTGATCGACGATGCCAGCCGCGGATCGAAGAAGCGGCa                                                                                                                                                <  2:350279/132‑1 (MQ=255)
   ttCAGCCAGACAAACGTTGAGTCGGTATCGCCGTAGATAACGTCGAAGCCCTGTGCTTCAATCAACGCTCTGGTTTGCCGCATGATCTGATGACCACGCATGGTGATCGACGATGCCAGCCGCGGATCGAAGAAGCGGGAGGc                                                                                                                                             >  2:558270/1‑143 (MQ=255)
          agccAAGCGTTGAGTCGGTATCGCCGTAGATAACGTCGTAGCCCTGTGCTTCAATCAACGCTTTGGTTTGCCGCATGATCTGATGACCACGCATGGTGATCGACGATGCCAGCCGCGGATCGAAGAAGCGGCAGGCGgtggtg                                                                                                                                      <  2:385325/140‑1 (MQ=255)
             cagccGTTGAGTCGGTACTGCCGTAGATGGCGTCGTAGCCCTGTGCTTCAATCAACGCTTTGGTTGGCCGCATGATCTGATGCCCACGCAGGGTGAGCGACGATGCCAGCCGCGGATCGAAGAAGCGGCAGGCGGTGGTGCCg                                                                                                                                   <  2:525089/139‑1 (MQ=255)
              aaaCGTTGAGTCGGTATCGCCGTAGATAACGTCGTAGCCCTGTGCTTCAATCAACGCTTTGGTTTGCCGCATGATCTGATGACCACGCATGGTGATCGACGATGCCAGCCGCGGATCGAAGAAGCGGCAGGCGGTGGTGCCGa                                                                                                                                  >  2:854309/1‑143 (MQ=255)
                tcGTTTAGTCGGTATCGCCGTTGATATCGTCGTAGCCCTGTGCTTCAATCCACGCTTTGGTTTGCCGCATGATCTGATGACCACGCATGGTGATCGACGATGCCAGCCGCGGATCGAAGAAGCGGCAGGCGGTGGTGCCggac                                                                                                                                <  2:771342/142‑4 (MQ=255)
                  gTTGAGTCGGTATCGCCGTAGATAACGTCGTAGCCCTGTGCTTCAATCAACGCTTTGGTTTGCCGCATGATCTGATGACCACGCATGGTGATCGACGATACCAGCCGCGGATCGAAGAAGCGACAGACAATGATACCGAGCAc                                                                                                                              >  2:512193/1‑143 (MQ=255)
                   ttggctCGGGAGCGCCGTAGATAACGGCGGAGCCCGGTGCTTCAATCAACGCGTTGGTTTGCCGCATGATCTGATGACCACGCATGGTGATCGACGATGCCAGCCGCGGATCGAAGAAGCGGCAGGCGGTGGTGCCGAGCACg                                                                                                                             <  2:203275/138‑1 (MQ=255)
                   ttGAGTCGGTATCGCCGTAGATAACGTCGTAGCCCTGTGCTTCAATCAACGCTTTGGTTTGCCGCATGATCTGATGACCACGCATGGTGATCGACGATGCCAGCCGCGGCTCGAAGAAGCGGCAAGCGGTGGGGCCGGGCCCg                                                                                                                             >  2:852810/1‑143 (MQ=255)
                      aggcGGTCTCGCCGTGGATAACGTCGTAGCCCGGTGCTTCAATGAACGCTTGGGTTTGCCGCATGATCTGATGACCACGCATGGTGATCGACGATGCCAGCCGCGGATCGAAGAAGCGGCAGGCGGTGGTGCCGACCACGCCa                                                                                                                          <  2:767111/140‑1 (MQ=255)
                           gTATCGCCGTAGATAACGTCGTAGCCCTGTGCTTCAATCAACGCTTTGGTTTGCCGCATGATCTGATGACCACGCATGGTGATCGACGATGCCAGCCGCGGATCGAAGAAGCGGCAGGCGGTGGTGCCGAGCACGCCATaaaa                                                                                                                     <  2:191497/143‑1 (MQ=255)
                                 ccGTAGATAACGTCGTAGCCCTGTGCTTCAATCAACGCTTTGGTTTGCCGCATGATCTGATGACCACGCATGGTGATCGACGATGCCAGCCGCGCATCGACGAAGCGGCAGGCGGTGGTGCCGAGCACGCCATAAAAGGCAtt                                                                                                               >  1:418005/1‑143 (MQ=255)
                                 ccGTAGATAACGTCGTAGCCCTGTGCTTCAATCAACGCTTGGGTTTGCCGCATGATCTGATGACCACGCATGGTGATCGACGATGCAAGCCGCGGATCGAAGAAGCGGCGGGCGGTGGTGCCGCGCACGcgaggaacggcgca                                                                                                               >  1:23937/1‑130 (MQ=255)
                                       aTAACGTCGTAGCCCTGTGCTTCAATCAACGCTTTGGTTTGCCGCATGATCTGATGACCACGCATGGTGATCGACGATGCCAGCCGCGGATCGAAGAAGCGGCAGGCGGTGGTGCCGAGCACGCCATAAAAGGCATTCacgat                                                                                                         >  2:370092/1‑143 (MQ=255)
                                            gtcgtAGCCCTGTGCTTCAATCAACGCTTTGGTTTGCCGCATGATCTGATGACCACGCATGGTGATCGACGATGCCAGCCGCGGATCGAAGAAGCGGCAGGCGGTGGTGCCGAGCCCGCCATAACAGGCAGTCAGGATGAttt                                                                                                    >  1:178224/1‑143 (MQ=255)
                                              cctAGCCCTGTGCTCCAATCAACGCTTTGGTTTGCCGCATGATCTGATGACCACGCATGGTGATCGACGATGCCAGCCGCGGATCGAAGAAGCGGCAGGCGGTGGTGCCGAGCACGCCATAAAAGGCATTCATGATGATTTTc                                                                                                  <  1:631359/141‑1 (MQ=255)
                                               tgatctctttgCTTCGATCCACGCTGTGGTTGGCCGCATGATCTGAGGACCACGCATGGTGATCGACGATGCCAGCCGCGGATCGAAGAAGCGGCAGGCGGTGGTGCCGAGCACGCCATAAAAGGCATTCATGATGATTTTCa                                                                                                 <  2:692422/134‑1 (MQ=255)
                                                     cTGTGCTTCAATCAACGCTTTGGTTTGCAGCATGATCTGATGACCACGCATGGTGACCGACGATGCCAGCCGCGGATCGAAGCAGCAGCAGGCGGTGGTGCCGAGCACACCATAAAAGGCAGGCACGACGATTCTCAGCGcca                                                                                           >  2:470752/1‑142 (MQ=255)
                                                      tgggCTTCAATCAACGCTTTGGTTTGCCGCAGGATCTGATGACCACGCATGGTGATCGACGGTGCCAGCCGCGGATCGAAGAAGCGGCAGGCGGTGGTGCCGAGCACGCCATAAAAGGCATTCATGATGATTTTCAGCGCCTg                                                                                          <  2:45041/140‑1 (MQ=255)
                                                          cTTCAATCAACGCTTTGGTTTGCCGCATGATCTGATGACCACGCATGGTGATCGACGATGCCAGCCGCGGCTCGAAGAAGCGGCAGGCGGTGGTGCCGCGCACGCCATAAAAGGCATTCATGATGATGTTCAGCGCCTGCGAc                                                                                      >  2:585855/1‑143 (MQ=255)
                                                           ttCAATCAACGCTTTGGTTTGCCGCATGATCTGATGACCACGCATGGTGATCGACGATGCCAGCCGCGGATCGAAGAAGCGGCAGGCGGTGGTGCCGAGCACGCCATAAAAGGCATTCATGATGATTTTCAGCGCCTGCGACa                                                                                     >  1:126339/1‑143 (MQ=255)
                                                           ttCAATCAACGCTTTGGTTTGCCGCATGATCTGATGACCACGCATGGTGATCGACGATGCCAGCCGCGGATCGAAGAAGCGGCAGGCGGTGGTGCCGAGCACGCCATAAAAGGCATTCATGATGATTTTCAGCGCCTGCGACa                                                                                     >  1:214884/1‑143 (MQ=255)
                                                           ttCAATCAACGCTTTGGTTTGCCGCATGATCTGATGACCACGCATGGTGATCGACGATGCCAGCCGCGGATCGAAGAAGCGGCAGGCGGTGGTGCCGAGCACGCCATAAAAGGCATTCATGAGGATGTTCAGCGCCAGCGGCa                                                                                     >  1:211316/1‑143 (MQ=255)
                                                           ttCAATCAACGCTTTGGTTTGCCGCATGATCTGATGACCACGCATGGTGATCGACGATGCCAGCCGCGGATCGAAGAAGCGGCAGGCGGTGGTGCCGAGCACGCCATAAAAGGCAATAACGTTGTCACTCAGCGCCCGCGAcg                                                                                     >  2:638277/1‑142 (MQ=255)
                                                              aatcgaCGCTTTGGTGTGCCGCATGATCTGATGACCACGCATGGTGATCGACGATGCCAGCCGCGGATCGAAGAAGCGGCAGGCGGTGGTGCCGAGCACGCCATAAAAGGCATTCATGATGATTTTCAGCGCCTGCGACAGCg                                                                                  <  2:476185/143‑1 (MQ=255)
                                                                 caaCGCTTTGGTTTGCCGCATGATCTGATGAACACGCATGGGGAGCGACGATGCCAGCCGCGGATCGAACAAGCGGCAGGCGGTGGTGCCGAGCACCCCATAAAAGGCATTCATGAAGATTTTCAGCGCCGGCGACAGcagat                                                                               >  2:748828/1‑139 (MQ=255)
                                                                       tttGGTTTGCCGCATGATCTGATGACCACGCATGGTGATCGACGATGCCAGCCGCGGATCGAAGAAGCGGCAGGCGGTGGTGCCGAGCACGCCATAAAAGGCATTCATGATGATTTTCAGCGCCTGCGACAGCGGTTTGTTAc                                                                         >  1:561126/1‑143 (MQ=255)
                                                                          ggTGTGCCGCAGGGTCTGATGACCACGCAGGGTGATGGCTGATGCCAGCCGCGGATCGAAGAAGCGGCAGGCGGTGGTGCCGAGCACGCCATAAGAGGCATTCATGATGATTTTCAGCGCCTGCGACAGCGGTTTGTTACCCt                                                                      <  2:817482/143‑1 (MQ=255)
                                                                                    ctGATCGGATGACCACGCATGGTGATCGACGATGCCAGCCGCGGATCGAAGAAGCGGCAGGCGGTGGTGCCGAGCACGCCATAAAAGGCATTCATGATGATTTTCAGCGCCTGCGACAGCGGTTTGTTACCCTGGCGTTTGGc                                                            <  2:393265/142‑1 (MQ=255)
                                                                                        gcTGATGACCACGCATGGTGATCGACGATGCCAGCCGCGGATCGAAGAAGCGGCAGGCGGTGGTGCCGAGCACGCCATAAAAGGCATTCATGATGATTTTCAGCGCCTTCGACAGGCGTTTGTTCCCCTGGCGTTTGGCTTcc                                                        >  1:308993/2‑142 (MQ=255)
                                                                                              gaCCACGCATGGTGATCGACGATGCCAGCCGCGGATCGAAGAAGCGGCAGGCGGTGGTGCCGAGCACGCCATAAAAGGCATTCATGATGATTTTCAGCGCCTGCGACAGCGGTTTGTTACCCTGGCGTTTGGCTTCATCgcgc                                                  >  1:824770/1‑143 (MQ=255)
                                                                                               acgaCGCGTGGTGGTCGACGTGGCCAGCCGCGGATCGAAGAAGCGGCAGGCGGTGGTGCCGAGCACGCCATAAAAGGCATTCATGATGATTTTCAGCGCCTGCGACAGCGGTTTGTTACCCTGGCGTTTGGCTTCATCGCGcc                                                 <  2:283256/140‑1 (MQ=255)
                                                                                                 cACGGAGGGTGATCGACGATGCCAGCCGCGGAGCGAAGAAGCGGCAGGCGGTGGTGCCGAGCACGCCATAAAAGGCATTCATGATGATTTTCAGCGCCTGCGACAGCGGTTTGTTACCCTGGCGTTTGGCTTCATCGCGCCCg                                               <  2:178224/143‑1 (MQ=255)
                                                                                                     cATGGTGATCGAGGATGCCAGCCGCGGATCGAAGAAGCGGCAGGCGGTGGTGCCGAGCACGCCAGAAAAGGCATTCATGATGATTTTCAGCGCCTGCGACAGCGGTTTGTTACCCTGGCGTTTGGCTTCATCGCGCCCGTGcc                                           <  2:317912/143‑1 (MQ=255)
                                                                                                      aTGGTGATCGACGATGCCAGCCGCGGATCGAAGAAGCGGCAGGCGGTGGTGCCGAGCACGCCATAAAAGGCATTCATGATGATTTTCAGCGCCTGCGACAGCGGTTTGTTACCCTGGCGTTTGGCTTCATCGCGCCCGTGCCa                                          >  2:510172/1‑143 (MQ=255)
                                                                                                      aTGGTGATCGACGATGCCAGCCGCGGATCGAAGAAGCGGAAGGCGGTGGTGCCGAGCACGCCATAAAAGGCATTCATGATGATGTTCAGCGCCTGCGACAGCGGTTTGTTACCCTGGCGTTTGGCTTCATCGCGCCCGTGCCa                                          <  1:333669/143‑1 (MQ=255)
                                                                                                      aTGGTGAGCGACGAGGCCAGCCGCGGAGCGAAGAAGCGGCAGGCGGTGGTGCCGAGCACGCCATAAAAGGCATTCATGATGATTTTCAGCGCCTGCGACAGCGGTTTGTTACCCTGGCGTTTGGCTTCATCGCGCCCGTGCCa                                          <  1:559350/143‑1 (MQ=255)
                                                                                                          tGATCGACGATGCCAGCCGCGGATCGCAGAAGCGGCAGGCGGGGGGGCCGAGCACGCCATAAAAGGCATTCATGATGATTTTCAGCGCCTGCGACAGCGGTTTGTTACCCTGGCGTTTGGCTTCATCGCGCCCGGGCCAGATg                                      >  1:400484/1‑143 (MQ=255)
                                                                                                             tggaccaggCCAGCCGCGGAGCGAAGAAGCGGCAGGCGGTGGTGCCGAGCACGCCATAAAAGGCATTCATGATGATTTTCAGCGCCTGCGACAGCGGTTTGTTACCCTGGCGTTTGGCTTCATCGCGCCCGTGCCAGATGTTa                                   <  2:706304/135‑1 (MQ=255)
                                                                                                               gacgaTGCCAGCCGCGGATCGAAGAAGCGGCAGGCGGTGGTGCCGAGCACGCCATAAAAGGCATTCATGATGATTTTCAGCGCCTGCGACAGCGGTTTGTTACCCTGGCGTTTGGCTTCATCGCGCCCGTGCCAGATGTTCGt                                 >  1:708951/1‑143 (MQ=255)
                                                                                                                   ctGCCGGCCGCGGGTCGACGAAGCGGCCGGCGGTGGTGCCGCGCTCGCCATTTGTGGTATTAATGATGTTTTTCAGCGCCTGCGACAGCGGTTTGTTCATCGGTGTTTTTGGTTCATCGCGCTCGTGCCAGATGTTAGTcaca                             <  2:217708/142‑1 (MQ=255)
                                                                                                                   aTGCCGGCCGCGGATCGACGAAGCGGCAGGCGGTGGTGCCGAGCGCGCCATAGAAGGCATTCATGATGCTTTTCAGCGCCTGCGACAGCGGTTTGTTACCCTGGCGTTTAGCTTCATCGCGCCCGTGCCAGATGTTAGTcaca                             <  2:750539/143‑1 (MQ=255)
                                                                                                                           cgcgGATCGAAGAAGCGGCAGGCGGTGGTGCCGGGCACGCCATACAAGGCATTCATGATGATTTTCAGCGCCTGCGACAGCGGTTTGTTACCCTGGCGTTTGGCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCgg                     <  1:631696/143‑1 (MQ=255)
                                                                                                                           cgcgGATCGAAGAAGCGGCAGGCGGTGGTGCCGAGCACGCCATAAAAGGCATGCATGATGATTTTCAGCGCCTGCGACAGCGGCTTGTTACCCTGGCGTTTGGCTTCATCGCGCCCGTGCCAGATGTTAGCCACAATCTCCgg                     >  2:116222/1‑143 (MQ=255)
                                                                                                                             cgGATCGAAGAAGCGGCAGGCGGTGGTGCCGAGCAAGCCATAAAAGGCATTCAGGATGATTTTCAGCGACTGCGACAGCCGTTGGTTACCCTGGCGTTTGGCTTCATCGCGCCCGTGGCAGATGTCCGTCACAAtcacaagcc                   >  2:84471/1‑136 (MQ=255)
                                                                                                                               gATCGAAGAGGCGGGAGGCGGAGGGGCCGAGCACGCCATAAAAGGCATTCATGATGATTTTCAGCGCCTGCGACAGCGGTTTGTTACCCTGGCGTTTGGCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCggcagg                 <  1:45572/143‑1 (MQ=255)
                                                                                                                                 tCGAAGAAGCGGCAGGCGGTGGTGCCGAGCACGCCATAAAAGGCATTCATGATGATTTTCAGCGCCTGCGACAGCGGTTTGTTACCCTGGCGGTTGGCTTCATCGCGCCCGTGCGAGATGATAGTCACAATCTCCggcagaca               >  2:282618/1‑143 (MQ=255)
                                                                                                                                   gaggaagCGGCAGGCGGTGGTGCGGAGCACGCCATAAGAGGCATTCATGATGATTTTCAGCGCCTGCGACAGCGGTTTGTTACCCTGGGGTTTGGCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAAt             <  2:142896/140‑1 (MQ=255)
                                                                                                                                      gaagCGGCAGGCGGTGGTGCCGAGCACGCCATAAAAGGCATTCATGATGATTTTCAGCGCCTGCGACAGCGGTTTGTTACCCTGGCGTTTGGCTTCATCGCGCCCGTGCCCGATGTTAGTCACAATCTCCGGCAGGCCATGtt          >  1:12702/1‑143 (MQ=255)
                                                                                                                                         gCGGCAGGCGGTGGTGCCGAGCACGCCATAAAAGGCATTCAGGATGATGTTCAGCGCCTGCGACAGCGGCATCGTACCCTGGCGTTTGGCCTCATCGCGCCCGTGCCACCTGCTCGGCACAATCGCCGGCACCCAATgccttt       >  2:563141/1‑138 (MQ=255)
                                                                                                                                           ggCAGGCGGGGGTGCCGAGCACGCCATAAAAGGCATTCATGATGATTTTCAGCGCCTGCGACAGCGGTGTGTTACCCGGGCGTTTGGCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTtct     <  1:732464/143‑1 (MQ=255)
                                                                                                                                            gCAGGCGGTGGTGCCGAGCACGCCATAAAAGGCATTCATGATGATTTTCAGCGACTGCGACAGCAGAATGTTCAGCTTCCGCTTGGCTTCATCCCGCCCGTGCCAGATGTCACCCACATTCTCCGGCAGGCAATATATTtctc    >  1:396436/1‑143 (MQ=255)
                                                                                                                                              aGGCGGTGGTGCCGAGCACGCCATAAAAGGCATTCATGATGATTTTCAGCGCCTGCGACAGCGGTTTGTTACCCTGGCGTTTGGCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTcgc  <  1:854309/143‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                              
CCTTTCAGCCAGACAAACGTTGAGTCGGTATCGCCGTAGATAACGTCGTAGCCCTGTGCTTCAATCAACGCTTTGGTTTGCCGCATGATCTGATGACCACGCATGGTGATCGACGATGCCAGCCGCGGATCGAAGAAGCGGCAGGCGGTGGTGCCGAGCACGCCATAAAAGGCATTCATGATGATTTTCAGCGCCTGCGACAGCGGTTTGTTACCCTGGCGTTTGGCTTCATCGCGCCCGTGCCAGATGTTAGTCACAATCTCCGGCAGGCAATGTTTTTCTCGC  >  NC_000913/64117‑64401

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.