| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 781369 = | 42 (0.850) | 9 (0.190) +GAG |
4/278 | 6.8 | 18.1% | noncoding (1/76 nt) | lysZ | tRNA‑Lys |
| ? | NC_000913 | = 2521004 | 41 (0.830) | noncoding (76/76 nt) | valU | tRNA‑Val | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAA > NC_000913/2520865‑2521141 | aaTTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAact > 1:640485/1‑143 (MQ=255) gAAAATGCGTTGACGCAGTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTa < 2:645541/143‑1 (MQ=255) aaaaTGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAactacataaagtag < 1:836048/143‑10 (MQ=255) aaaaTGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAg < 1:710524/143‑1 (MQ=255) aaaTGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGAGTAGCGCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAacgccgtgacgtagt > 1:256229/1‑130 (MQ=21) tGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGtctc < 1:10422/143‑1 (MQ=255) gCGTCGACTCATTCTGGAACCGCCCTAGAATGCGACCCCACACAGCGGGGGTGATCAGCGCAGCTGGGCGAGCACCTCCCTTACAAGGAGCGGGTGGGCTGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTcc < 1:123903/143‑1 (MQ=18) ttGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCTCCTTTCTGTCGCCTccgcc > 1:779457/1‑143 (MQ=21) tCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCTACTTTCTGTCGTCTCCGCCGTGTa > 1:75695/1‑143 (MQ=255) tCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTa > 1:486588/1‑143 (MQ=255) tCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTa > 1:475186/1‑143 (MQ=255) tCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACCTTCTGTAGTCTCCGCCgtgtc > 1:67060/1‑142 (MQ=255) tCATTTTGAACTCTCCCTATAATGCGACTACACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGCCGGCGGTTCGATCCCGTCATCACCCCCCAACTACTTTATGTAGTCTCCGCCGTGTa > 1:789047/1‑143 (MQ=255) aTTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGc > 1:304739/1‑143 (MQ=255) ctgcctagtaTGCGCCTCCACACCGCGTGGGGGATTAGATCACCTGGGAGAGCACCTCCCTTGCTGTTAGGGGCTCGGCGTTTCGAGCCCGTCATCACCCACCAACTACGTTATGTAGTCTCCGCCGTGTAGCAAGAAATTga < 2:793163/134‑1 (MQ=21) ctcCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTga < 1:383777/143‑1 (MQ=255) cccgagacaGCGGGTGTGATGAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTGTGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAg < 2:126500/137‑1 (MQ=25) cacacaGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCGCGTAATAACACACAAACTAATTTATGTAGTCTTCAACGTGAAGCAAGAAATTGAGAAGTGGGAGATTacata > 1:422872/1‑139 (MQ=21) cacacaGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTCTGTAGTCTCCTCCGTGTAGCAGGAAACTGAGAAGTGGGTGATTAGCTc > 1:611367/1‑143 (MQ=255) acaGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGCAATTGAGAAGTGGGTGATTGGCTCAGc > 1:401616/1‑143 (MQ=255) gCGGTGGGGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTgg < 2:262270/143‑1 (MQ=255) ggggggGATTAGCTCGGCTGGGACAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTTTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGga < 2:270194/143‑1 (MQ=255) gggggTGATTAGCTCAGCTGGGAGAGCCCCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGga < 1:80287/143‑1 (MQ=255) gggTGATTAGCTCAGCTGGGAGACCCACTCCATTATGGGTTGGTTGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGgaga < 1:808832/143‑1 (MQ=37) gttaTTACCCCAGCTGGGACCGCACCTCCGTTTCAAGGAGGGGGTCGGCCGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGc < 1:27321/140‑1 (MQ=37) tCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTCTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCtt > 1:283080/1‑143 (MQ=255) cgaccaccacCCGTACAAGGAGGGGGCCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTGATGTAGGCGGCGCCGTGTAGGAAGAGATTGGGGAGCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAaggagg < 1:160488/139‑1 (MQ=25) cTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGACTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTcgg > 1:643717/1‑143 (MQ=255) cccTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCTCCGGTCGGTAGCTTCGTCGGTGCAGCAGGTGATTGATAATTGGGTGATTATCGGTGCTGGGGGTGCACGTCCCCTCCCTGGAGGGGGGcgccg > 2:518709/1‑143 (MQ=2) cgccAAGCAGCGGGTCGGCGGTGCGATCCCGTCAGAACCCGCCAACTAGTTTATGTACTCCCCGCCCTGTAGCAAGAAATTGAGACGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGtt < 1:360944/140‑1 (MQ=21) aaGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACCTACTGTCGGTAGCCTCCGCCGTGCAGCCAGAAATGCAGCGGGGGGGGATTGGCTCTGCTGGGAGAGCACGACCCTGGCGGGGGGCGGGTCGGCGGGACGAt > 2:726194/1‑143 (MQ=12) aagatggccgcggTTCGATCCCGTCATCACCCACCAACTACCTTATGTAGGCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCg < 1:406722/134‑1 (MQ=25) ggTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCCAGAAATTGAGAAGTGGGGGATTAGCCCAGCTGGGAGAGCACCTCCCTTACACGGAGGGGGGCGGCGGGGCGATCCCGgcat > 2:265003/1‑143 (MQ=37) tCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTCTGTAGTCTCCGCGGTATAGCAAGAGACTGCGAAGCGCGTGATTAGCTCAGCTGGGAGAGCACCTACCGTACAGGGAGGAGATCGCCGGACAGACCCCGgcatcc > 2:77977/1‑142 (MQ=19) ggcggTTCGATCCCGTCAGTACTGCCCTACTACTTTATGTAGCCTCCGCGGTGTAGCAAGAAATTGAGCAGTGGGTGATTAGTTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATcacc < 1:552066/143‑1 (MQ=18) gcggTTCGATCCCGTCATCACCCACCACCTCCTTTAGGTAGCCTCCGCCGTGTAGCAATACACTGTGAAGTGGGTGATTAGCGGCGCTGGGAGAGCACCTCCCTCACAAGTAGGGGATCGGCCGATCGGCCCCCTCATcaccc > 2:389413/1‑143 (MQ=16) cggtaccagccccTCATCCCCCCCCATCTCCCTTATGTAGTCTCCGCCGTGCAGCAACAACTTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATcaccca < 1:519049/134‑1 (MQ=17) ccGTCATCACCCGCCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTtctc < 1:680397/143‑1 (MQ=255) atcaCCCACCATCTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAg < 1:833199/143‑1 (MQ=255) atcaCCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGAGGCACGATCCCGTCATCACCCAACGCttggtggcgag > 2:830374/1‑134 (MQ=21) ccaccaACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTcaa > 1:457844/1‑143 (MQ=255) | AATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAA > NC_000913/2520865‑2521141 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |