Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3798990	3799544	555	26 [24]	[24] 28	[waaU]–[waaZ]	[waaU], [waaZ]

ATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCTTTTGATTCTTCTGCACTGATGTCTTGAAGTTTAATAAATGGAATTACATCGTAAGAAATAGCTGTATCATCTGATAAATTATAAATATTAATATCTTTTACATTATCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACAACGGTACAGAGATCAGCAGTTCTTTGTGAATCT  >  NC_000913/3799353‑3799783                                                                                                                                                                                                 |                                                                                                                                                                                                                                               aTAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCTTTTGATTCTTCTGCACTGATGTCTTGACGTTTAATAAATGGAATTACATCGTAAGAAATAGCTGTATCATCTGATAAATTATAAATATTAATATCTTTTACATTATCATCCATAAAACGAAAAAATGGCACAATTTTAAATAAATCCCTATTTAATTACAAGGGCATGGGATTTTTATTTtcaacaaaaa                                                                                                                                                                                                  >  2:327292/1‑235 (MQ=255)                                                                  tGATGTCTTGAAGTTTAATAAATGGAATTACATCGTAAGAAATAGCTGTATCATCTGATAAATTATAAATATTAATATCTTTTACATTATCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGGCCAGAACAAATAATCCGCGCATACTTaa                                                                                                                                         >  1:587668/1‑231 (MQ=255)                                                                                                                            tAAATTATAAATATTAATATCTTTTACATTATCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAAAATAATGGCAtaaaaaaaaacaaaaaataaat                                                                        >  2:141623/1‑217 (MQ=255)                                                                                                                                                         tATCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAAt                                                                                                                                                                                                                                               <  2:1096187/42‑1 (MQ=255)                                                                                                                                                         tATCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAAt                                                                                                                                                                                                                                               >  1:1096187/1‑42 (MQ=255)                                                                                                                                                           tCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACCTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAGGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCaaa                                                                                                             >  2:846819/1‑170 (MQ=255)                                                                                                                                                           tCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACCTAATGCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACGTAAGTGAATATGCGATTTGAATTGCAGCaaa                                                                                                             <  1:846819/170‑1 (MQ=255)                                                                                                                                                            cATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTa                                       <  1:327292/239‑1 (MQ=255)                                                                                                                                                                cATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACa                                   >  1:584494/1‑239 (MQ=255)                                                                                                                                                                 aTAAAACGAAAAAATGGAAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTAGTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACaa                                  <  2:584494/239‑1 (MQ=255)                                                                                                                                                                   aaaaCGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCa                                                                                                         <  1:913574/166‑1 (MQ=255)                                                                                                                                                                   aaaaCGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCa                                                                                                         >  2:913574/1‑166 (MQ=255)                                                                                                                                                                     aaCGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCGTAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGAATGGCATGAGCAATAACCAAGACTAATGTCCTTGCACAAACAAACCAGAAGACCTTTTTTaaaaaaagga                              >  2:394818/1‑230 (MQ=255)                                                                                                                                                                     aaCGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGACTATGCGATTTGAATTGCAGAAAAGCCAATAGTATGGCATGAGCAATAACCa                                                                                 >  2:639257/1‑188 (MQ=255)                                                                                                                                                                     aaCGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCa                                                                                                         >  1:488606/1‑164 (MQ=255)                                                                                                                                                                     aaCGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCa                                                                                                         <  2:488606/164‑1 (MQ=255)                                                                                                                                                                     aaCGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCa                                                                                 <  1:639257/188‑1 (MQ=255)                                                                                                                                                                     aaCGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGAATGGCATGAGCAATAACCAAAACTAATGTCCTTGCAAAATCAAACAAAACGACCTTTTTTAAAAAACgga                              >  2:298229/1‑238 (MQ=255)                                                                                                                                                                      aCGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACAACGGTa                             <  1:394818/239‑1 (MQ=255)                                                                                                                                                                      aCGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACAACGGTa                             <  1:359093/239‑1 (MQ=255)                                                                                                                                                                          aaaaaTGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACAACGGTACa                           <  1:298229/237‑1 (MQ=255)                                                                                                                                                                                     tatTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACAACGGTACAGAGATCAGCAGtt              <  1:141623/239‑1 (MQ=255)                                                                                                                                                                                       ttttGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACaa                                  <  1:1101246/217‑1 (MQ=255)                                                                                                                                                                                       ttttGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACAACGGTACagag                        <  1:695647/227‑1 (MQ=255)                                                                                                                                                                                                 aTCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCaa                                                                                       >  1:337909/1‑154 (MQ=255)                                                                                                                                                                                                 aTCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCaa                                                                                       <  2:337909/154‑1 (MQ=255)                                                                                                                                                                                                 aTCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGAAATAACCAAAACTAATGTCCTTGCAAAATCCAACCAGACAACCCTTTTTAAACAACGGAACAgagactgtcatttataaaacacaa   >  2:1101246/1‑218 (MQ=255)                                                                                                                                                                                                 aTCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGAATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGCAAACGGTACAAAAAACAGAAGTTcctgtaccttat  >  2:695647/1‑228 (MQ=255)                                                                                                                                                                                                 |                                                                                                                                                                                                                                               ATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCTTTTGATTCTTCTGCACTGATGTCTTGAAGTTTAATAAATGGAATTACATCGTAAGAAATAGCTGTATCATCTGATAAATTATAAATATTAATATCTTTTACATTATCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACAACGGTACAGAGATCAGCAGTTCTTTGTGAATCT  >  NC_000913/3799353‑3799783

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑