| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 647,210 | A→C | 24.3% | G100G (GGT→GGG) | citG ← | 2‑(5''‑triphosphoribosyl)‑3'‑dephosphocoenzyme‑A synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 647,210 | 0 | A | C | 24.3% | 98.7 / 4.8 | 59 | G100G (GGT→GGG) | citG | 2‑(5''‑triphosphoribosyl)‑3'‑dephosphocoenzyme‑A synthase |
| Reads supporting (aligned to +/- strand): ref base A (34/8); new base C (2/14); total (36/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.60e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATGGCGCGCCAGCCCAGCAGGG > NC_000913/646974‑647445 | gcaccGGTAAGGCCAAGCGTGTGGTAAAACCGTTGCCCTGCCGGCAGTTGAGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCAc < 1:473790/235‑1 (MQ=255) gCCAAGCTTTTGTAACAACGGTTGACCTGCCGGCAGTTGAGAATTATTGGTACGCAGTGCGCGATCGGTCAGGCCCCGGCAGAACCTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGc < 1:1044731/237‑1 (MQ=255) aaGCTGTTGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCGG‑CCTTTATGCGTGTTTACGCCCGCAGGGGCC‑CGGAACATATCACCTAAGCAAGCCATAc > 1:355530/1‑239 (MQ=255) tGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTgg > 1:981292/1‑239 (MQ=255) cAACCGTTGACCGGCCGTCCGTTGTGAATTATGGGTACGCAGTGCGCGATCGGTCGGGCCACGGAAAAAATTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTa < 1:92266/239‑1 (MQ=255) aCCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTaa > 1:254609/1‑238 (MQ=255) aCCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGGGTTTACGCCCGCAGGGGCG‑CGGAACAAATCACCTTAGCAAGCCATACCAATTggggggaa > 2:92266/1‑233 (MQ=255) ttGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACCTATCACCTTCGCAAGCCATACCAATTGAGCGTAATCCGt > 1:697287/1‑239 (MQ=255) ttGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACAGATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGt > 1:135384/1‑239 (MQ=255) tGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTg > 1:510444/1‑239 (MQ=255) gACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGCAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAAAATATAACCTTCGCAAGCCATACCCATTGGGGGGAACCCgggg > 2:906368/1‑239 (MQ=255) gACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCCTAccctgtctctttttcacatc > 1:974463/1‑220 (MQ=255) gACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGGTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑ACTG‑CCTTTATGCGTGTTTACGCCCCCAGTGGCG‑CGGAACATAACACACTCGCAAGCAAAACCAATTAGGGGTAACCCGTgg > 2:652168/1‑239 (MQ=255) gCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATCCCAATTGGGCGTAATCCGTGGAGTa > 1:763137/1‑238 (MQ=255) gCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGGGTTTACGCCCGCAGTGGCG‑AGGAACATATCACCTTCGCAAGCCATCCCAATTGGGCGTAATCCGTGGAGTa > 1:1104119/1‑238 (MQ=255) ccGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATCCCAATTGGGCGTAATCCTTGGGGTAc > 1:275755/1‑238 (MQ=255) aGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCGGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGGGTTTACCCCCCCAGGGGCC‑GGGAACAAATACCCTTCCAAAACCATCCCCATTGGGGGCAATCCGGGGGGAACCCCttt > 2:653964/1‑238 (MQ=255) aGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGGGTTTACGCCCGCAGGGGCG‑CGGAACATATCACCTTCGCCAGCCCAACCAATTGGGTGTAATCCGGGGGGTACCCCTTc > 2:822586/1‑239 (MQ=255) ttGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCAGTGGAGTACCGCTTCTGGG‑GCCAttt > 1:810520/1‑238 (MQ=255) cAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGCGTTGACGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATCCTTGTTTACACCCGCAGCTGCG‑CGGAACCTATCCCCCTCGAACCCCCTACCAATTGGGCGGCAACCGCGCGGAACCCCTCCTTGT‑GCCCTTTccccccacc > 2:406910/1‑232 (MQ=255) tttcggtcgtgttgcgccctcGGGAGAACTTTGGCGCCGGAGAACAACCTGTTGTTGGCTTTCCCGGTTGTTTGAGTTGAACCAAACGGCCAATTCCCGCAAATGGCAGCCCGAAACAAAAA‑AT‑GCTG‑CTTTTATCCGTGTTTCCGCCCGCAGTGGCG‑CGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACa < 2:1091176/218‑1 (MQ=255) ttCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGGGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCACAAGCCATACCAATTGGGCGCAATCCGGGGAGAACCGCTTCCGGG‑CCCATTTCCGCACCACAg > 2:471657/1‑238 (MQ=255) cgcgATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGGTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGAACATAGCAGCCCTAAAGAAAAA‑AT‑CCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGG‑GCCATTTCCGCAACACAGGc > 1:780224/1‑238 (MQ=255) gcgATCGGCCGGGCCACGGCAAAAACTGGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAACCGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCAc < 1:245528/239‑1 (MQ=255) cGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAAt > 1:913600/1‑239 (MQ=255) gtaaggcatgggaaaaacgcggccggcGTAGAACAAACTGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCAAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTGCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAAtt < 1:466054/217‑1 (MQ=255) gTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGCAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGGTTACGCCCGCAGTGGCG‑CGGACCAACTCACCTTCCCAAGCCATACCAATTGGCCGTAACCCGTGGAGAAACGCTT‑TGGTCGCCATTTCCCCACCCAAGCCACCaaaacc > 2:37140/1‑236 (MQ=255) gTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCC‑CGGAACATATCACCTTCGCAAGCCATACCACTTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCCCACTACAGGCACCAAAtta > 1:568574/1‑238 (MQ=255) cgcggaaaacaCTGGCCGCCGAAAAAAAAACGGTTGTTGGCTTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCGTCCCTAAAAAAAAA‑AT‑GCTG‑CCTTTAGGCGTGTTTACGCCCGAAGTGGCG‑CGGAAAATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGaa < 2:810520/228‑1 (MQ=255) caggggaaaaaCTGGCCGCCGTAGAACAAACGGTTGTGGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGaa < 1:506450/230‑1 (MQ=255) cGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACg > 1:1079719/1‑239 (MQ=255) acttggccggtgTAGAACAAACGGTTTTTGGCGTTCCCGGTTGGTTGAGTTGAAGCAACCGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTagc < 1:342545/228‑1 (MQ=255) aCGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAACTTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAacg > 1:1016465/1‑238 (MQ=255) tgttgGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCCCCAAATTCACGGAAACGGGCTAGCCAGCCCTGAATCGCCAGCGCGCTGc > 1:776949/1‑239 (MQ=255) tACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCa > 1:610458/1‑181 (MQ=255) ttggtggAGTTGAAGCAAACGGCCAATTGCCCAACATAGCAGCCTTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAAGCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTcc < 1:850596/238‑1 (MQ=255) ttggtggAGTGGAAGCAAGCGGCAAGTTGCCGCCGATAGC‑GCCCCAAAAAAAAA‑AA‑GGTGCCCTTAATCGGTGTTTCCCCTCGC‑GTGGGGCCGGACCATACCCCCTTCGAAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTcc < 2:296131/238‑1 (MQ=255) tttgttggttaagacaacgggCAAATTGCCCTACATAG‑AGCCCAAAAAAAAAAGAT‑GCGG‑TCGTTAGGTGTGTGTACGCCCGCAGTGCCG‑CGGATCATACCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAg < 2:275755/220‑1 (MQ=255) gagttgaAGAAAGCGGCCAATTGCCGCACAGAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCGGTGGCG‑CGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCa < 1:822586/239‑1 (MQ=255) aaCGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTCCGCCCGCAGTGGCG‑CGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTgc < 1:1092612/239‑1 (MQ=255) ccGGCCATTTTCCCAACATACCCGCCCTAAAAAAAAA‑AG‑TCTG‑CCTTTAGGCGTGTTTCCGCCGTGGGTGGCG‑CGGAACATATCGCCCTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCCCCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTgcg < 2:1094671/238‑1 (MQ=255) aCGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAACCGGGGTAGCCAGCCCTGACTCGCCACCCCGCTCCGGGGGAAATCTTCCAGCCCCCTATCTTTGTgc > 2:779877/1‑238 (MQ=255) cGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGGACCGCTTCTGGG‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCGGCGGGGGAAATATTCCAGCGCCATACCTTTGGgcgc > 2:720304/1‑239 (MQ=255) ccaattgcccccagaagccgcCCTAAAGAAAAA‑AT‑GCGT‑CCTTTAGGCGTGTTTACGCCCGCAGTGGCG‑CGAACCAATTCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCAc < 1:811719/223‑1 (MQ=255) ttGCCCCACATAGCAACCCAAAAGAAAAA‑AT‑GCTG‑CCTTTAGGCGTGTTTACGCCCGCAGGGGCG‑CGGAACATATCACCTGCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAg < 1:195725/239‑1 (MQ=255) tccaTAGCCACCCTAAAAAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGTAGTGGCG‑CGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATg < 1:264601/237‑1 (MQ=255) tccttcgcgcCCCAAAAAAAAA‑ATGGCTT‑CTTTTAGGGGGTTTTCCGCCCGGAGGGGCG‑CGGAATATCCCCCCTTCTAAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATg < 2:254609/231‑1 (MQ=255) agcagcCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCCGTTAATGCgtc > 1:405598/1‑236 (MQ=255) cagcCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAACCGCCAGCCCGCGCCGGTGGGAATCTTCCAGCGCCAAACCTTTTTGCCAACCCAAGTTAAtcgaaacc > 2:894587/1‑231 (MQ=255) tAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGGGGAAATCTTCCAGCGCCCTATCTTTTGGCCAACCCCAGTTAATGCGATCCCCGCgg > 1:427664/1‑238 (MQ=255) aaGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCatat > 1:998304/1‑201 (MQ=255) aaa‑aT‑GCTG‑CCTTTATGCGTTTTTACGCCCGCAGTGGCG‑CGGAACATATCCCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGttt < 1:471657/239‑1 (MQ=255) tttATGCGGGTTTCCGCCCGAGGGGGCG‑CGGAACACTGCCCCCTGCCAAGCCCTACCAATTGGGCGTAACCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGAt < 1:652168/239‑1 (MQ=255) aTGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTg > 1:892991/1‑238 (MQ=255) tttACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACCGATTGACTtcag > 1:1028870/1‑238 (MQ=255) tttACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGCTTGACTtcag > 1:174697/1‑238 (MQ=255) cggaGTGGCA‑CGGCACATCCCCCCGTCGCAAGCCATACCAATTGGGCGTAATCCGTTGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATgg < 1:37140/236‑1 (MQ=255) tatCCCCTCCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCGGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATGGCGCGCCAGCCCAGCAgg < 1:433181/239‑1 (MQ=255) atCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGGAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATGGCGGGCCAGCCCCGCAggg > 2:804551/1‑239 (MQ=255) | GCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTTGGCGTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTGCCGCACATAGCAGCCCTAAAGAAAAA‑AT‑GCTG‑CCTTTATGCGTGTTTACGCCCGCAGTGGCG‑CGGAACATATCACCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGT‑GCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATGGCGCGCCAGCCCAGCAGGG > NC_000913/646974‑647445 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |