BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	734,952	T→G	13.0%	pseudogene (820/1521 nt)	rhsO →	pseudogene, Rhs family

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	734,952	0	T	G	13.0%	198.0 / 3.4	103	pseudogene (820/1521 nt)	rhsO	pseudogene, Rhs family
Reads supporting (aligned to +/- strand): ref base T (31/54); new base G (11/7); total (42/61)
Fisher's exact test for biased strand distribution p-value = 6.69e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 106 total aligned reads displayed.

AGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAA‑GTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGCTGAATCCGGTTCAGTATATAGATTCAATGGG  >  NC_000913/734715‑735190

ggggtggtgTCCCCGCCGGTGCTGGGGCAGATGCTCGACCGGCTGGAAG‑GTGAAACCCTGGCTGCCCGGGTGAGTGAGGAAACCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑Gt                                                                                                                                                                                                                                                <  1:259228/235‑1 (MQ=255)

  tgttgtGTCCCCCCGGGTTGTGGTGCAGTTGCTCGACAGGCTGGAAG‑GTGAAATCCCGGCTGACCGGATGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCCTCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTgcg                                                                                                                                                                                                                                             <  2:434282/239‑1 (MQ=11)

  tgtgGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAA‑GTGAAATCCTGGCTGACCGGGGGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGGGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCACCACGGAAGGGGCAACAGAATG‑‑GGgc                                                                                                                                                                                                                                              >  1:637605/1‑238 (MQ=255)

   gtgattaaggggcaggTGCGGGGGCAGAGGCTCGACCGGCGGGAAA‑GTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTgcg                                                                                                                                                                                                                                             <  1:401927/224‑1 (MQ=11)

   gggttgcccccGGCGGTGGTGGGGGAGGTGCCCGACGGGGTGGAAA‑GTAAAATCCTGGCGGCCGGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTgcg                                                                                                                                                                                                                                             <  2:911409/230‑1 (MQ=11)

   ggggtgTTCCCGCGGGGTGTGGGGGAGATGCCCGGCCGGGTGAAAG‑GTGAAATCCGGGCTGACCGGGGGAGGGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTgcg                                                                                                                                                                                                                                             <  1:593539/236‑1 (MQ=11)

    tggtgTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAA‑GTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GGgcgcg                                                                                                                                                                                                                                           >  1:836612/1‑238 (MQ=37)

      gtttccccGCCGGTGCTGGTGCAGATGCTCGCCCGGCTGGAAA‑GTGAAAGCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAg                                                                                                                                                                                                                                          <  1:1076441/233‑1 (MQ=255)

        gtcccggccgGTGCGGGGGGAGATGCTCGACCGGGTGGAAA‑GGGAAATCCTGGCTGACCGGGGGGGGGGGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGaa                                                                                                                                                                                                                                        <  1:226024/232‑1 (MQ=11)

        gtTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAA‑GTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCCGATGGACCCGGGGTCCACG‑CCGGCGCGAAAAATCCACCAGGACCACGGCGACCATCGGGGCCT‑GCCCCCGGGGCTTTTCAACACGGAACGGGCACAAGACTG‑‑GGCGGCAGaaa                                                                                                                                                                                                                                       >  2:813905/1‑238 (MQ=11)

        gtTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAA‑GTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCCCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GGGCGCAGAAt                                                                                                                                                                                                                                       >  1:990779/1‑239 (MQ=37)

           cccGCCGGGGTGGGGCCAGATGCCCGACGGGTGTGAAA‑GGGAAAGCCGGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACg                                                                                                                                                                                                                                    <  1:481366/239‑1 (MQ=11)

            ccgccgGTGCTGGTGCAGATGCTCGACCGGCTGGAAA‑GTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGACTG‑‑GTGCGCCGAATACGa                                                                                                                                                                                                                                   >  1:922185/1‑239 (MQ=37)

              gccgGTGCTGGTGCAGATGCTCGACCGGCTGGAAA‑GTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGCAGGGGCAACAGAATG‑‑TGGCGCAGAATACGATg                                                                                                                                                                                                                                 >  1:625992/1‑239 (MQ=255)

                   tGCTGGTGCAGATGCTCGACCGGCTGGAAA‑GTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACC‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCG‑CCCACTGGGGCTTGTCCGCCCGGAAGGGGAAACAAAAAG‑‑GGGGGCaaaaaaaaggaaaaga                                                                                                                                                                                                                            >  2:612099/1‑227 (MQ=11)

                       ggggCAGATCCCCGACCGGCTGGAAA‑GGGAAATCCTGGCTGACCGGGTGAGGGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCa                                                                                                                                                                                                                        <  1:1095692/236‑1 (MQ=255)

                          cacaaggccagACCGGGTGGAAA‑GGGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAAc                                                                                                                                                                                                                      <  1:758404/228‑1 (MQ=255)

                           gcgggggcgcacccgggggAAAGGTGAAACCCGGGGCGGCCGGGTGGGTGGGGAAAGCCGCGGCGGGCGGGCAGCGGGCGGCCGGACGGTGGAGAAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAAc                                                                                                                                                                                                                      <  2:1105460/221‑1 (MQ=11)

                             gATGCTCGACCGGCTGGAAA‑GTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCTTCGTGCGGCCTGACGGGGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGCCCT‑GCCCCTGGCCCGTGTCACCACCGAACGGGCCACAAAATG‑‑GTGCGCAAAATACGa                                                                                                                                                                                                                                   >  2:401927/1‑222 (MQ=11)

                             gATGCTCGACCGGCTGGAAA‑GTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCCTCGCGGCCT‑GCCCCTGGCGCTTGGCAGCACGGCAGGGGCAACAACACG‑‑GGGCGCGCAAAACGATGAATGGGGCAACcagc                                                                                                                                                                                                                  >  2:763357/1‑239 (MQ=11)

                               tGCTCGACCGGCTGGAAA‑GTGAAACCCTGGCTGACCGGGGGAGTGGGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAACCCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACctgc                                                                                                                                                                                                                  <  1:1014149/237‑1 (MQ=255)

                                  tggccgggCGGGAAA‑GTGAAATCCGGGGTGGCCGGGGGGGGGGGGAAAGCCCCCGCGGGCTGGCATCGTGCGGCCTGACGGTGGAGAAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCCCCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCtgaat                                                                                                                                                                                                             <  2:59289/233‑1 (MQ=11)

                                   cGACCGGCTGGAAA‑GTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGGACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCG‑GCCGCTGGCGCTTGTCAGCCCGGAAGGGGCAACAGAAAG‑‑GTGCGCAGAAAACAATAAATGGGGCAACCCGCtgaatg                                                                                                                                                                                                            >  2:649008/1‑239 (MQ=11)

                                                     aaaTCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGACGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCAGCCTCa                                                                                                                                                                                            >  1:393660/1‑238 (MQ=255)

                                                        tCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCt                                                                                                                                                                                         >  1:278543/1‑238 (MQ=37)

                                                        tCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTg                                                                                                                                                                                        >  1:462740/1‑239 (MQ=37)

                                                           tggttggcggggtgggtGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTgcag                                                                                                                                                                                     <  1:649008/230‑1 (MQ=255)

                                                           tGGCTGACGGGGGGGGGGGGGAAGCCCGCCGCTGGCTGCAATCGTGGGGCCTGACGGGGGAGAAGAGG‑CAAAACCAGATGGCCCCGGTGTACACG‑CCGGCGCGAAAAATCCCCCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTgcag                                                                                                                                                                                     <  2:462740/239‑1 (MQ=11)

                                                           tGGCTGACCGGGTGAGGGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTgcag                                                                                                                                                                                     <  1:763357/239‑1 (MQ=37)

                                                             gCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGGACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTTGCAGCACTGAAGGGGCAAAAGAATG‑‑GGGCGCAGAAACCGCTAAATGGGGCAACCGGCTAAATAAAAAAAAACCgaaaaaaacgcgaga                                                                                                                                                                                   >  2:498667/1‑225 (MQ=11)

                                                                       gtagtgggAAAAGCGCCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTTCACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCg                                                                                                                                                                          <  1:907697/236‑1 (MQ=255)

                                                                              ggAAAGCCGCCGGTTGCTGGCATGGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCg                                                                                                                                                                   <  1:912701/238‑1 (MQ=255)

                                                                               gAACGCCCCCGCTGGTGGGCTCCGGGCGGCTGGACGGGGGGGCA‑ATGCCAAAACGCGGTGGCCCCGGTGTAGCCG‑CCGGCGCGAAAAACCCACCTGTACCACTGCGCCCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCgg                                                                                                                                                                  <  2:747123/238‑1 (MQ=11)

                                                                               caatggcgccgtGGGCTGGCATTGTGCGGCCGGCCGGTGTAGAACAGG‑CAGAGCTAGATGGACCCGGTTGCGCCG‑CCGGCGCTAATAATCGACCTGGACACCTGCTCACATGCCGCCCT‑GCCGCTGGCGCTTGTCAGAACGGAAGGGGCAACAGAAGG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTTCTGAATGAAGAGAACCCGCATCAGCTGCAGCATCTTATCCGCCTGCCgg                                                                                                                                                                  <  2:590968/232‑1 (MQ=2)

                                                                                   cccccggctggctgGCATCGTGGGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTTTACCCG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGgcag                                                                                                                                                             <  1:787705/233‑1 (MQ=255)

                                                                                    ccctcgtggggtggcCTCGTGGGGGCTGGCGGTGGGCAAGTGG‑CAAACCCAGATGGACCCGGTGTACCCG‑CCGGCGGGAAATATCCACCTGTACCACTGCGACCATGGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGgcagc                                                                                                                                                            <  2:278543/228‑1 (MQ=11)

                                                                                     cggcggcgggtggcATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTCAACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGgcag                                                                                                                                                             <  1:645456/227‑1 (MQ=255)

                                                                                     cggcgcTGGTGGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑ACAATCCAGATGGCACCGGTGTCAACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGgcagc                                                                                                                                                            <  1:780512/235‑1 (MQ=11)

                                                                                     cgccgcTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCGGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GGGCGCGGAATACGATGAAGGGGGCAACCTGCTGAATGAATAGAACCCGAATCAGGTGAAACCGCTTAACCCCCGGCCCGGgcagca                                                                                                                                                           >  2:453627/1‑239 (MQ=11)

                                                                                     cgccgcGGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGgcagca                                                                                                                                                           <  1:287799/239‑1 (MQ=37)

                                                                                       ccgcTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGCCCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGt                                                                                                                                                         <  1:747947/239‑1 (MQ=37)

                                                                                             gctggcATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGCATG‑‑GTGCGCAGAATACGGTGAATGTGGCAACCTGCTGAATGAAGAGAAACCGCATCAGAGGCACAAGATTATCCCCCGTCCGGGgcaccggaagaaga                                                                                                                                                   >  2:1043375/1‑228 (MQ=11)

                                                                                               tggcATCGTGCGGCCGGACGGTGGAGCAGATG‑CAAAACAAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCCCCTGTACCACTGCGACCAGCGCGGCCT‑GCCTCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCGGGCTGCCGGGGTAGCAGTAtgatga                                                                                                                                                  <  1:314267/238‑1 (MQ=11)

                                                                                                       tGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTACCCCCCGCCCgggggcacaggacataacggaggccg                                                                                                                                          >  2:977685/1‑216 (MQ=11)

                                                                                                       tGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGAATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCg                                                                                                                                          >  1:714156/1‑238 (MQ=37)

                                                                                                         gggccggcgggTGGAGCAGATG‑CAAACCCACGTGGCCCCGG‑GTTCACGCCCGGCGCGAAAAACCCCCCTGCCCCACTGGACCCATCGCGGCCT‑GCCGGTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATTCGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGcc                                                                                                                                       <  2:732065/230‑1 (MQ=11)

                                                                                                          ggtcggccgggtgAGCAGGTG‑CAAAGCCAGATGGCACCGGTGGACCCC‑GCGGCGCGAAAAACCCCCCTGTCCCTTGGGCACCATCGGGGCCT‑GCCGGTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTAGCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGcc                                                                                                                                       <  2:772741/226‑1 (MQ=11)

                                                                                                          ggCCTGACGGGGGGGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGcc                                                                                                                                       <  1:56948/238‑1 (MQ=37)

                                                                                                                        gCAGATC‑CAAAACCAGATGGCCCCGGTGAACCCG‑CCGGCGCGAAAAATCCACCTGTACCACGGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGc                                                                                                                         <  1:327232/238‑1 (MQ=255)

                                                                                                                            ttG‑CAAAACCAGGGTGACCCGGGTTCCCCG‑CCGGGCCGAAAATCCCCCCTGTCCCAATGCGACCATCGGGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCg                                                                                                                    <  2:183995/238‑1 (MQ=11)

                                                                                                                            aTG‑CAAAACCAGGGGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCCCCTGTACCACGGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGc                                                                                                                         <  1:372284/234‑1 (MQ=255)

                                                                                                                              g‑CAAAACCAGATGGCCCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCg                                                                                                                                          <  1:997473/215‑1 (MQ=25)

                                                                                                                               gaaaaaCCAGATGGACCCGGTGTACCCG‑CCGGCGCGAAAAATCCCCCTGGACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCg                                                                                                                    <  1:931747/235‑1 (MQ=25)

                                                                                                                                       aGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCGGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGAATGATGAGGAGTCGGGCCTGTATTAAAACCGCCCCCCCcattactg                                                                                                           >  2:372284/1‑235 (MQ=11)

                                                                                                                                        gggggcccgggtgaccgcG‑CCGGCGGGAAAACTCCCCCGGTACCACTGCGACCA‑GGCGGGCTGGCCGGTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGAcc                                                                                                         <  2:1035482/222‑1 (MQ=11)

                                                                                                                                          tggccccgggtgacgcG‑CCGGCGCGAAAAACCCGCCTGTACCCCTGCGGCCATCGGGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTGTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATg                                                                                                            <  1:605957/221‑1 (MQ=11)

                                                                                                                                          tGGCCCCGGTGTCCACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGGGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGAcc                                                                                                         <  1:452431/237‑1 (MQ=25)

                                                                                                                                            ggcccgggttcacccgccgggcggAAAAACCCACCGTTACCACTGGGACCATGGCGGCCT‑GCCGTTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGc                                                                                                      <  1:498667/216‑1 (MQ=11)

                                                                                                                                                  gtgtACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAggg                                                                                               >  1:718378/1‑239 (MQ=35)

                                                                                                                                                   tggcaacG‑CCGGCGCGAAAAACCCACCGTTACCACGGCGACCAACGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAggg                                                                                               <  1:1043375/233‑1 (MQ=255)

                                                                                                                                                    gtccacG‑CCGGGGCAAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAgggg                                                                                              <  1:977685/235‑1 (MQ=25)

                                                                                                                                                      acccG‑CCGGCGCGAAAAATCCCCTGGTACCCCTGCGCCCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCCCGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAg                                                                                            <  1:813905/235‑1 (MQ=255)

                                                                                                                                                         accccGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAGGta                                                                                         <  1:363263/236‑1 (MQ=37)

                                                                                                                                                            ccggccgaaaaaaCCCCCCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAGGTatat                                                                                      <  1:624457/231‑1 (MQ=255)

                                                                                                                                                             cGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCCGGGGAGGAATATc                                                                                     >  1:14266/1‑239 (MQ=37)

                                                                                                                                                              ggCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAGGTATATc                                                                                     >  1:500911/1‑238 (MQ=37)

                                                                                                                                                                cgcgAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAGGTATATCAc                                                                                   >  1:607410/1‑238 (MQ=37)

                                                                                                                                                                cgcgAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTAAAACCCCACCCGCCATTATGACCCGCTGCAGGGGAGGTatataaa                                                                                   >  2:217478/1‑235 (MQ=255)

                                                                                                                                                                cccgAAAAACCCCCCCGCCCCCCGGCCACCATGGCGCCCG‑GCCCGTGGCGTTTGCCAGCACGGAAGGGTCAACAGAATG‑‑GTGCGCAGAATCCGATGAATGGGGCAACCTGCGGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAGGTATATCACt                                                                                  <  2:500911/237‑1 (MQ=11)

                                                                                                                                                                              ctgtcccgcgggcacctgcggggCCT‑GCCGCTGGCGCTTGTCAGCAGGGAAGGGGCAACAGAAGG‑‑GTGGCCAGAATCCGATGAAGGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAGGTATATCACTCAGGATCCGATTgg                                                                    <  2:836612/218‑1 (MQ=11)

                                                                                                                                                                               tgacccaccgcacccAACGGGGCCT‑GCCGGGGGCCGTTGTCAGGACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAGGTATATCACTCAGGATCCGATTggg                                                                   <  1:921415/226‑1 (MQ=11)

                                                                                                                                                                                 tACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCg                                                                                                                                                                   <  1:801184/141‑1 (MQ=39)

                                                                                                                                                                                 tACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCAACCGCTATTATGACCCGCTGCAGGGGGGGGAAATAACTCAGGAACCGATTGGGcg                                                                 >  2:1000716/1‑238 (MQ=255)

                                                                                                                                                                                 tACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GGGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCg                                                                                                                                                                   >  2:801184/1‑141 (MQ=255)

                                                                                                                                                                                        gCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACACCCGCCACCGCTATTATGACCCGCTGCCGGGGAGGTATATTACTCAGGATCCGCTTGGGCGGAAgggg                                                          >  2:901115/1‑239 (MQ=255)

                                                                                                                                                                                        gCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAGGTATATCACTCGGGATCCGCTTGGGCTGAAgggg                                                          >  1:507295/1‑239 (MQ=37)

                                                                                                                                                                                        gCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAGGTATATCACTCAGGATCCGATTGGGCTGAAgggg                                                          >  1:449020/1‑239 (MQ=37)

                                                                                                                                                                                        gCGACCATCGCGGCCT‑GCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTG‑‑GTGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGCAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCCCCACCGCCATTTTGACCCGCGGCAGGGGCCGAATAACCCCACGGATCAGCTTGGGCGGAAgggg                                                          >  2:919898/1‑239 (MQ=11)

                                                                                                                                                                                           aCCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCAAGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGAAGTATGATGAGGAGTCCGGCCTGTATTTCAACCGCCACCGCTATTATGACCCGTGGCCGGAGAGGTATATAACTCCGAGTCCGATTGGGCTGACGGGGGGa                                                       >  1:513186/1‑239 (MQ=11)

                                                                                                                                                                                                          ccGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGCATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGGGGGATATCACTCAGGAt                                                                            >  1:227389/1‑204 (MQ=255)

                                                                                                                                                                                                                     ggtggggcaagagggtgCAAAAGAAGG‑‑GTGCGCAAAAAACGGGGAATGGGGAACACGTCTGAATGAAGAGAACCCGCACAAGCTGGATCGGCTTATCCGCATGCCGGGGCAGCTGTAGGATGAGGGGTCCGGCCTGTATTACAACCGCCTCCGCTATTATGACCCGCTGCAGGGGAGGTATATCACTCAGGATCCGATTGGGCTTAAGGGGGGATGGAATTTTTATCAGTATCCGCTg                               <  2:637539/222‑1 (MQ=11)

                                                                                                                                                                                                                       gccgcccGGAAGGGAGAAAAGAATG‑‑GTCCGAAAAAATCGATGAAGGGGGCAACCTGCTGAATAAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCCCCGGCCGGGGCAGCGGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGCTGAAt                            <  2:607410/233‑1 (MQ=11)

                                                                                                                                                                                                                       gccgCAGGGAAGGGGCAAAAAAATG‑‑TGGCGAAGAATACGAGGAAGGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCGGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGCTGAAt                            <  2:718378/236‑1 (MQ=11)

                                                                                                                                                                                                                         acgcaggAAGGGCCAACAGAATG‑‑GTGCGAAGAATGCGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGTTTATCCCCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGCTGAATc                           <  1:453627/233‑1 (MQ=255)

                                                                                                                                                                                                                           cACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGcc                                                                                                                                       >  1:310819/1‑128 (MQ=35)

                                                                                                                                                                                                                           cACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGcc                                                                                                                                       <  2:310819/128‑1 (MQ=35)

                                                                                                                                                                                                                           cACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAAc                                                                                                                            >  1:737883/1‑139 (MQ=34)

                                                                                                                                                                                                                           cACGGAAGGGGCAACAGAATG‑‑GTGCGAAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGAAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAAc                                                                                                                            <  2:737883/139‑1 (MQ=21)

                                                                                                                                                                                                                             cggggggggCAAAAGAAGG‑‑GGGCCCACAATACGAGGAGTGGGGCACCCTGCGAAAGGAAGAGACCCCGCATCAGCGGCAGGCGCTTACCCGCCGGCCGGGGAAGCAGTATGATGAGGGTGCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAGGTATATCACTCAGGAGCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGCTGAATCCGGtt                      <  2:637605/234‑1 (MQ=11)

                                                                                                                                                                                                                             cGGAAGGGGCAACAGAATG‑‑GGGCGCAAAATTCGGTGAAAGGGGCAACCTGCTGAAGGAAAGAAACCCGCACCGGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTAGGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGCTGAATCCGGtt                      <  2:507295/239‑1 (MQ=11)

                                                                                                                                                                                                                             cGGAAGGGGCAAAAGAATG‑‑GGGCGTAGAATACGAGGAGTGGGACAACCGGCGGAATGAAGAGAACCCGCATCAGCTGCATCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGCTGAATCCGGtt                      <  2:14266/239‑1 (MQ=11)

                                                                                                                                                                                                                             cGGAAGGGGAAAAAGAAGG‑‑GGGCGCAGATGGGGTTAAAGGGGGCCACATGCGGAAGGGAGAGAACCCGCATCGGGTGCAGTAGCTTGTCAGCCTGCCGGGGCAGTAGTATGATGAGGAGGCCGGGCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGCTGAATCCGGtt                      <  2:513186/239‑1 (MQ=11)

                                                                                                                                                                                                                                aaGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAGGTATATGACTCCGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGCTGAATCCGTTTccg                   >  1:307125/1‑237 (MQ=21)

                                                                                                                                                                                                                                aaGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGCTGAATCCGGTTCAg                   >  1:971307/1‑239 (MQ=37)

                                                                                                                                                                                                                                    ggCAACAGAATG‑‑GGGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAGGTATATCACTCAGGATCCGATTGGGCTGAA‑GGGGGATGGAATTTTTATCAGTATCCGCTGAATCCGGTTCAGtata               <  1:451404/238‑1 (MQ=255)

                                                                                                                                                                                                                                        aCAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAGGTATTTCACTCAGGAACCGATTGGGCTG‑AGGGGGGATGGAATTTTTTTAAGTAACCGCGGAAACCGGTTCAGtataaaaat          >  2:451404/1‑234 (MQ=11)

                                                                                                                                                                                                                                        aCAGAATG‑‑GGGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGCTGAATCCGGTTCAGTATATAGa           <  1:292720/239‑1 (MQ=39)

                                                                                                                                                                                                                                              tG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAGGTATATCACTCAGGATCCCATTGGGCTGAAGGGGGGATGGACTTTTTATCATTATCCGCTGAATCCGCTTCAGAAAAAAGAATCaag     >  2:499335/1‑238 (MQ=11)

                                                                                                                                                                                                                                                   tGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGCTGAATCCGGTTCAGTATATAGATTCAATggg  >  1:179341/1‑239 (MQ=255)

                                                                                                                                                                                                                                                   tGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACACGCATCAGCTGCAGCAGCTTATCCGCCTGACGGGGCAGCAGTATGATGAGGAGCACGGCCTGTATTACAACCGCCACCGCCAATATGCCCCGCGGCAGGGGAGGTATATCACCACGGGTCCGATTGGGCTGCAGGGGGGATGGAAATTTTATCAGGTTCCGCTGAATCGGGTTCAGTATTAAGATTAAATagg  >  2:308266/1‑239 (MQ=11)

AGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAA‑GTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATG‑CAAAACCAGATGGACCCGGTGTACACG‑CCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCT‑GCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATG‑‑GTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGCTGAATCCGGTTCAGTATATAGATTCAATGGG  >  NC_000913/734715‑735190

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`