Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 762,113 | T→C | 17.5% | S198P (TCC→CCC) | sucB → | dihydrolipoyltranssuccinase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 762,113 | 0 | T | C | 17.5% | 175.1 / 3.7 | 76 | S198P (TCC→CCC) | sucB | dihydrolipoyltranssuccinase |
Reads supporting (aligned to +/- strand): ref base T (41/18); new base C (4/12); total (45/31) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.01e-03 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
TGCTGGCTGAACACAATCTCGACGCCAGCGCCATTAAAGGCACCGGTGTGGGTGGTCGTCT‑GACTCGTGAAGATGTGGAAAA‑A‑CATCTGGCGAAAGCCCC‑GGC‑GAAAGAGTCTGCTCCGGCA‑GCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCAGCATGGCGGTTTCTACGCCGCG > NC_000913/761883‑762351 | ggttggcgaaacaacatccggACGGCAGCGCAGTTAAAGGCACCGGTGTGGGTGGTCGGCT‑GCCGCGTGAAGGTTGGGAAAA‑A‑CTTATGGCGAAACCCCG‑GGC‑GAAAGGGGCTTGTCCGGCA‑GCGGCTGCTCCGGCGGCCCAACCGGCTTGGGCGGCACGTAGGGAAAAACGTTCCCA‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCAAAAACCTCCACCGcc < 2:603883/219‑1 (MQ=255) cacaATCTCGACGCCAGCGCCATTAAAGGCACCGGTGTGGGTGGTCGTCT‑GACTCGTGAAGATGTGGAAAA‑A‑CATCTGGCGAAAGCCCC‑GGC‑GAAAGAGTCTGCTCCGGCA‑GCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACCCGCCT‑GCGTAACCGGGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCAc > 1:896853/1‑239 (MQ=255) ccacctcgcgccgccgccccATAAAAGGCCCGGGGGGGGGGGGCCGTCT‑GACTGGGGAGGGTGGGGAAAA‑C‑CTCCTGGC‑AAAGCCCCGGGC‑GAAAGGGCCCGGTCCGGCG‑GGGGCTGCCCCGGCGGCGCACCCGGCTCGGGCTGCCGGTAGTGAAAACCGTGCCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACCCCACCGCCATGCTGACCACg < 2:213938/221‑1 (MQ=255) cggccccAGGGCCATTAAAGGCACCGGTGGGGGTGGTCGTCT‑GACTCGTGAAGATGTGGAAAA‑A‑CATCTGGCGAAAGCCCC‑GGC‑GAAAGAGTCTGCCCCGGCA‑GCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACg < 1:92298/234‑1 (MQ=255) aCGCCAGCGCCATTAAAGGCACCGGTGTGGGTGGTCGTCT‑GACTCGTGAAGATGTGGAAAA‑A‑CATCTGGCGAAAGCCCC‑GGC‑GAAAGAGTCTGCTCCGGCA‑GCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACCaa > 1:786301/1‑239 (MQ=255) aGCGCCATTAAAGGCACCGGTGTGGGTGGTCGTCT‑GACTCGTGAAGATGTGGAAAA‑A‑CATCTGGCGAAAGCCCC‑GGC‑GAAAGAGTCTGCTCCGGCA‑GCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACCCCACCGCCATGCTGACCACGTTCAACGAAGTCaa > 1:1038750/1‑239 (MQ=255) aGCGCCATTAAAGGCACCGGTGTGGGTGGTCGTCT‑GACTCGTGAAGATGTGGAAAA‑A‑CATCTGGCGAAAGCCCC‑GGC‑GAAAGAGTCTGCTCCGGCA‑GCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGGGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAAACCCACCGCCATACTGACCACGTTCAACAAAATCaa > 2:87306/1‑239 (MQ=255) cgcCATTAAAGGCACCGGTGTGGGTGGTCGTCT‑GACTCGTGAAGATGTGGAAAA‑A‑CATCTGGCGAAAGCCCC‑GGC‑GAAAGAGTCTGCTCCGGCA‑GCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACa > 1:707174/1‑239 (MQ=255) ttAAAGGCCCGGGTGTGGGTGGTCGTCT‑GACTGGTAAAGATGTGGAAAA‑A‑CATCGGGCGAAAGCCCC‑GGC‑GAAAGAGTCTGCTCCGGCA‑GCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAg < 1:363416/239‑1 (MQ=255) ttAAAGGCCCCGGTGGGGGGGGTTGTGT‑GCCTCGGGAAGGTTGGGAAAA‑A‑CGTCGGGCGAACGCCCG‑GGG‑AAAAGGGCCTGCTCCGGCA‑AGGGGTGCTCCGGGGGCGCAACCGGCTTTGGGTGCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAg < 2:896853/239‑1 (MQ=255) ataaggctcccGGTG‑GGGGGGTCGGCTAGACGCGGGAGGTTGGGAAAAA‑C‑CACCTGGC‑AAAGCCCC‑CGCTGAAGGGGTC‑GCTCCGGGAGGCGGCGGCCCCGGCGGCGCACCCGGTGTGGGCGGCTGGTGGTAAAAACCGGTTCCC‑GATAACCCGCCT‑GCGTAAGCTGGTGGCAGAGCTTCTGCGGGAAGCGAAAAACCCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAg < 2:205204/230‑1 (MQ=255) aaaGGCCCGGGGGTGGGTGGTCGTCG‑GACTCGTGAAGATGTGGAAAA‑A‑CATCTGGCGAAAGCCCC‑GGC‑GAAAGAGTCTGCTCCGGCA‑GCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGcc < 1:574293/239‑1 (MQ=255) aCCGGTGTGGGTGGTCGTCT‑GACTCGTGAAGATGTGGAAAA‑A‑CATCTGGCGAAAGCCCC‑GGC‑GAAAGAGTCTGCTCCGGCA‑GCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCCGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGCTTAt > 1:39841/1‑239 (MQ=255) aCCGGTGTGGGTGGTCGTCT‑GACTCGTGAAGATGTGGAAAA‑A‑CATCTGGCGAAAGCCCC‑GGC‑GAAAGAGTCTGCTCCGGCA‑GCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGAGTAt > 1:926921/1‑239 (MQ=255) aCCGGTGTGGGTGGTCGTCT‑GACTCGTGAAGATGTGGAAAA‑A‑CATCTGGCGAAAGCCCC‑GGC‑GAAAGAGTCTGCTCCGGCA‑GCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGACGGTCTGCTGGAAGCGAAAAACTCCACCCCCATGCTGCCCACGTTCACCGAAGTAAAAATGAATCCGATTag > 1:942390/1‑238 (MQ=255) cGGTGTGGGTGGTCGTCT‑GACTCGTGAAGATGTGGAAAA‑A‑CATCTGGCGAAAGCCCC‑GGC‑GAAAGAGTCTGCTCCGGCA‑GCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGGGTCCC‑GATGACTCCCCT‑CCGTAAGCGTGTGGCCGAGCGTCTGCTGGAAGCGAAAAACTCCCCCCCCCTGCTGACCACGTTCAACGAAGACAACATGAAACCGATTATga > 2:239628/1‑238 (MQ=255) cGGTGTGGGTGGTCGTCT‑GACTCGTGAAGATGTGGAAAA‑A‑CATCTGGCGAAAGCCCC‑GGC‑GAAAGAGTCTGCTCCGGCA‑GCGGCTGCTCCGCCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGACCGTCTGCTGGAAGCGAAAAACTCCACCGCCATCCTGCCCACGTTCACCGAGGTCACACTGAAGCCGATTACgg > 1:573238/1‑239 (MQ=255) ggtgggggtcggcgtgcgatccGTGAAGATGGGGAAAA‑T‑CCTGTGGCAAATGCCCG‑GGC‑GAAAGGGTCTGCGCGGGGC‑GGGCGTGCCCGGGCGGCGCACCGGGCTCGGGGTGCACTAAGGGAAAAACGTGTCCG‑GAGGCCCCGCCT‑GGGAAAGCGTGTGGCAGAGAGTCTGCTGGAAGCAAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGa < 2:547049/218‑1 (MQ=255) tgggtggTCGTCT‑GACTCGTGAAGATGTGGAAAA‑A‑CATCTGGCGAAAGCCCC‑GGC‑GAAAGAGTCTGCTCCGGCA‑GCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAAATCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTg > 1:604534/1‑239 (MQ=255) ggtCGTCT‑GACTCGTGAAGATGTGGAAAA‑A‑CATCTGGCGAAAGCCCC‑GGC‑GAAAGAGTCTGCTCCGGCA‑GCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTaa > 1:63033/1‑239 (MQ=255) gttgggtcgccgcGTGAAG‑TGGGGAAAACA‑CGTGTGGCGAACGCCCC‑GGG‑AAAGGTGGCCGCCGCGGGA‑GCGGCTGCTCCGGCGGAGAAACCGGGTCGGGGTGCACTGAGTGAAAAGCGGGTCCC‑GATGACTCGCCT‑GGGTAAGCGGGTGGCAGGGCGTCTGCGGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTa < 2:631949/226‑1 (MQ=255) cgtcT‑GACTCGTGAAGATGTGGAAAA‑A‑CATCTGGCGAAAGCCCC‑GGC‑GAAAGAGTCTGCTCCGGCA‑GCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCa > 1:48536/1‑239 (MQ=255) cgtcT‑GACTCGTGAAGATGTGGAAAA‑A‑CATCTGGCGAAAGCCCC‑GGC‑GAAAGAGTCTGCTCCGGCA‑GCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAAAGGGTCCC‑GATGACTCGCCC‑GCGTAAGCGTGTGGCCGAGCGTCTGCTGGAAGCGAAAAACCCCACCGCCCTCTCGGCCACGTTCAACCAAGCTACCATGAACACGATTATggctgtcggacacga > 2:665635/1‑226 (MQ=255) ccgtttgcccGTGAAAAGGGGGAAAA‑ACCATTGGGCAAAAGCCCG‑GGG‑GAAAGAGTCTGCCCCGGCA‑GGGGCTTCCCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAg < 1:54035/229‑1 (MQ=255) tcT‑GACTCGTGAAGATGTGGAAAA‑A‑CATCTGGCGAAAGCCCC‑GGC‑GAAAGAGTCTGCTCCGGAA‑GCGGCTGATCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACCCCCCT‑GCGTAAGCGGGTGGCCGAGCGTCCGCTGGAAGCGAAAAACTCAACCGCCATGCTGACCACGTTCACCGAATACAACAGCAAGccagtacaggacaagcgaaaccaga > 2:566695/1‑216 (MQ=255) ggAAAA‑A‑CATCTGGCGAAAGCCCC‑GGC‑GAAAGAGTCTGCTCCGGCA‑GCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGCACTGCGTAAGCAGAACGGCGAAGCGTTTGaaa > 1:867139/1‑239 (MQ=255) a‑CATCTGGCGCAAGCCCC‑GGC‑GAAAGAGTCTGCTCCGGCA‑GCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCGGGTGGCAGCGAACAACCCCACCGCCATGCTGACCACGTTCAACGAAGTACACATGAAGCCCGTTTCGGGTGTTGGTAAGCATGACGGGGAAAGGTTTaaaaaagaac > 2:189349/1‑235 (MQ=255) cATCTGGCGAAAGCCCC‑GGC‑GAAAGAGTCTGCTCCGGCA‑GCGGCTGCTCCGGCGGCGCAACCGGCCCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGGTCAACGAAATCAACATAAAGCCGATTATGGAGCTCCGTAAACAATACGGGGAAGCGTTTGaaaaaacccg > 2:678209/1‑234 (MQ=255) gCCCC‑GGC‑GAAAGTGCTTGCTCCGGGT‑GCGGCTCCCCGGGGGGCCGCACCGGCTTGGGCGCGACGAGGGTAAAAACGTGCCGC‑GCGGACTCGCCT‑GGGTAAGCGTGGGGCAAGGCGTCTGTGGGAAGCGAAAAGCTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCt < 2:766943/239‑1 (MQ=255) cgccggagagtgtgtcgcccccGGCA‑GCGGCGGCCCCGGCGGTGCACCCGGGTCGGGCTGCACGGAGTGAAAAGCGTGCCCC‑GCTGCCTCGCCG‑GCATGAGCGGGCGGCAGAGGGTCGGGTGGAAGAAAAAAACCCCCCCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTc < 2:672111/217‑1 (MQ=255) c‑GGC‑GAAAGAGTCTGCTCCGGCA‑GCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAg > 1:365787/1‑173 (MQ=255) c‑GGC‑GAAAGAGTCTGCTCCGGCA‑GCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGGGAAGCGTTTGAAAAACGCCACGGCATCCGCCTgg > 1:1103084/1‑237 (MQ=255) ggC‑GAAAAGGTCTGCCCCGGGA‑GCGGCTGCTCCGGGGGCGCACCCGGCTTTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCt < 1:397719/239‑1 (MQ=255) tGCTCCGGCA‑GCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCtttt > 1:509440/1‑237 (MQ=255) tGCTCCGGCA‑GCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCt > 1:40390/1‑239 (MQ=255) tGCTCCGGCA‑GCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGGGAAGCGTTTGAAAAACGCCAAGGCATCCGTCTGGGCTTTATGTCCtttt > 1:893321/1‑237 (MQ=255) ggCTGCTCCGGCGGCCAACCCGGCCGTGGCTGACGGTAGTGAAAAACGTGCCCG‑GAGGACCCGCCG‑GCGAAAGCGGGTGGCAGAGCTTCTGCTGGAAGCAAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCg < 1:665635/238‑1 (MQ=255) gctgctCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTTAAGCGTTTGAAAAACGCCACGGCATCCGTCAGGGCCTTATGTCCTTCTAAGTGaaacgggg > 2:695568/1‑234 (MQ=255) ctgctCCGGCGGACCAACCGGCTCGGGCTGCACGTAGTGAAAACCGTGCCCC‑GATGACTGGCCT‑GCGAAAGCGGGTGGCAGGGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCggt < 1:678209/238‑1 (MQ=255) tCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACCCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTCCGGAGCAGCGTTTGAAAAAGCCCAACGACGCAGTTCAGGCTTTTTGTCCTTCTCCGTGAAAACGGGGGTTg > 2:50734/1‑239 (MQ=255) ccacaccggtttgggCTGCCGGTGGTGAAAAACGGGCCCC‑AATGCCT‑GCCTCGGGTAAGCGGGTGGCAGGGCGTGTGGTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCt < 2:48536/225‑1 (MQ=255) gCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGTTGGTTGAAGCCCTGAAACGTTACCCGGAAgg > 2:836437/1‑238 (MQ=255) aCGTAGTGAAAAACGTGTCCG‑GATGACTCGCCT‑GCGTAGGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTg < 1:905980/238‑1 (MQ=255) aCGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAACCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACCTGAAAGCGCTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGa > 1:214767/1‑239 (MQ=255) tgggAAAAAACTGTGCCGGATGCCTCGCCG‑GGGGAAGCGTGTGGCAGAGCGTTGGCTGGAAGCGAAAACCCCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGaa < 1:683425/234‑1 (MQ=255) aaCGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTCCGTAAGCAGTACGGTGaa > 1:237739/1‑137 (MQ=255) gtCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAACCGTTACCCGGAAGTGAACGCTTCTATCGCCg > 1:380871/1‑238 (MQ=255) gtCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCtt > 1:1025207/1‑229 (MQ=255) gtCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACgg > 1:901668/1‑239 (MQ=255) gtCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACg > 1:61359/1‑238 (MQ=255) gtCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGGGAACGCTTCTATCGACgg > 1:718168/1‑239 (MQ=255) gaccc‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGCAAGCGAAAAACTCAACCGCCATGCTGACCACGTTCAACGAAGTAAACATGAAGACGATTATGGAGCTGCGTAAGCAGTAAGGTGCAGCGATTGAAAAACGCCGCGGCATCCGTCTGGGCTGTCTGTCAGTCTACTGTAACGCGTGGGTTGAAGCCCTCGAACGTGTCCCGGacggcacacgtgtactcgcggg > 2:897655/3‑218 (MQ=255) ccc‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACCCTTCTATCGCCGGCg > 1:947758/1‑239 (MQ=255) aatgccctgCCT‑GGGTAACCGTTGGGGAGAGCGTTGGAGGGAACGGAAAACCGCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATg < 1:318272/231‑1 (MQ=255) gccTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACg < 1:239628/237‑1 (MQ=255) cGCCT‑GCGGAAGGGGGTGGCAGAGCGTCGGCTGGAATGCAAAAACCCCCCCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGt < 1:79395/239‑1 (MQ=255) gCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGtt > 1:785806/1‑239 (MQ=255) ccgt‑GCGTAGACGTGTGGCAGGGGTTATGGAGGAAGAAAAAAACCGCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGtt < 1:44551/236‑1 (MQ=255) ccT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAACCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGGGAACGCTTCTATCGACGGCGCTAACGGGGttt > 1:441419/1‑239 (MQ=255) cGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCCATGCAGTGGTTTAcc > 1:401627/1‑238 (MQ=255) gCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTACCGCCGGCGCTGCCGGGGTTTACCACAAca > 2:991138/1‑238 (MQ=255) gCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGGTGAAGCCCTGGAACGTTACCCGGAAGGGAAAGCTACTATCGACGGCGACGACGTgggtaccccaaaat > 2:381166/1‑227 (MQ=255) gtgGCAGGGCGTATGCTGGAAGCAAAAAACCCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTAtt < 1:151637/238‑1 (MQ=255) gtgGAAGGGCGTCTGCTGGAAGCGAAAACCCCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTAtt < 1:87306/238‑1 (MQ=255) tgGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCCCGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGGGACCGCTTCTACCGACCGCGAGACCGAGGTTTACCAAAAAAATTTc > 2:890236/1‑239 (MQ=255) tgGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGAACTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAAACCTTCTCTCGAGCGCGTTGCGCTGGTTTACCACAAccaattt > 2:799135/1‑233 (MQ=255) tgGAAGTGCGTCTGCTGGAAGCGAAAAACCCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTc < 1:316911/239‑1 (MQ=255) ggCAGGGCCTCTGCGGGAACGAAAAAACCCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTc < 1:890236/238‑1 (MQ=255) gggtgttggtgggaacgaaaaaaCCCCCCCGCCAGGGTGACCACGTTCAACGAAGGCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGt < 2:1038750/221‑1 (MQ=255) gagCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAg > 2:504503/1‑87 (MQ=255) gagCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAg < 1:504503/87‑1 (MQ=255) gctttttgtgGAAGAAAAAAACTCCACCGCTATGCTGACCACGTTCAACGAAGGCAACATGAAGCCGATTATGGATCTGCTTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCTGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGt < 2:509440/229‑1 (MQ=255) tggtgGAACAGAAAACCCCCACCGGCATGCTGACCAAGTTCAACGAAGTCAACATGAAGCCGATTATGGAACTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCAGCATg < 1:799135/236‑1 (MQ=255) gctgGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGCAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGGGGTTTCCCCAAACTATTTCACCGTCAgactgc > 1:407656/1‑234 (MQ=255) aaGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCt > 2:1052615/1‑120 (MQ=255) aaGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCt < 1:1052615/120‑1 (MQ=255) tCCCCCGCCATGCTGACCCCGTTCAACGAAGTCAACATGAAGCCGATTATGGACCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCAGCATGGCGGTTTCTACGCcgcg < 1:189349/239‑1 (MQ=255) | TGCTGGCTGAACACAATCTCGACGCCAGCGCCATTAAAGGCACCGGTGTGGGTGGTCGTCT‑GACTCGTGAAGATGTGGAAAA‑A‑CATCTGGCGAAAGCCCC‑GGC‑GAAAGAGTCTGCTCCGGCA‑GCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCC‑GATGACTCGCCT‑GCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCAGCATGGCGGTTTCTACGCCGCG > NC_000913/761883‑762351 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |