BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	1,170,684	T→G	13.9%	H1094P (CAC→CCC)	mfd ←	transcription‑repair coupling factor

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,170,684	0	T	G	13.9%	201.3 / 2.5	109	H1094P (CAC→CCC)	mfd	transcription‑repair coupling factor
Reads supporting (aligned to +/- strand): ref base T (39/43); new base G (16/6); total (60/49)
Fisher's exact test for biased strand distribution p-value = 5.32e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 109 total aligned reads displayed.

TGCAGGGAAGTGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGATGAA  >  NC_000913/1170452‑1170919

tGCAGGGAAGTGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCCCGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCATTCAAATCCTGAATAAATTTCCGGCGCGTCGGACCATCAAGTCGGTAATGCTCCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATAAACGTGAatct                                                                                                                                                                                                                                           >  1:345327/1‑239 (MQ=255)

tGCAGGGAAGTGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTTGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCCAGGCGCTAATGCTGCGGCGGTTTTTGCAGCAAACCAACCAAACAGGCCGGATTAAAGTGGtttt                                                                                                                                                                                                                                           >  2:187497/1‑237 (MQ=255)

tGCAGGGAAGTGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCCAGGCGGTAATGCTGCGGCTGTTTTTGGCGGAAACCAATCAAACAGGCCGGAGTAACGTGAgtct                                                                                                                                                                                                                                           >  2:687034/1‑239 (MQ=255)

tGCAGGGAAGTGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCG‑TTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGCTTAACGGGAttct                                                                                                                                                                                                                                           >  1:1002998/1‑238 (MQ=255)

 gCAGGGAATGGCAAATATTTTTGTAATGTTGCAGGTGGGGGTGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGATCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGAttctt                                                                                                                                                                                                                                          <  2:428743/239‑1 (MQ=255)

  cAGGGAAGTGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAACTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGAttcttt                                                                                                                                                                                                                                         >  1:533306/1‑238 (MQ=255)

     ggAAGTGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCGGCAAACCAATCAACCAGGCCGGGTTAACGTGATTCTTCT‑Cg                                                                                                                                                                                                                                     >  1:679346/1‑239 (MQ=255)

     ggAAGTGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGGTTAACCGGATTCTTCT‑Cg                                                                                                                                                                                                                                     >  1:365245/1‑239 (MQ=255)

          tGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGACTAAATTTCAGGCCCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTTCAGCAAACCAAACAACCAGGCCGGATAAACGGGATTCTTTT‑Cgcgaaa                                                                                                                                                                                                                                >  2:219922/1‑234 (MQ=255)

          tGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAACTTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCCGTTTTTTAAGCCAACCAATCAAACCAGCCGGATTAACGGGATTTTTTT‑CGGCaaa                                                                                                                                                                                                                                >  2:1100399/1‑239 (MQ=255)

          tGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGTACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCCGGCCGGATTAACGGGATTCTTCT‑CGGCaaa                                                                                                                                                                                                                                >  1:618694/1‑239 (MQ=255)

          tGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCCAGCCAATCAACCAGCCCGGATTAACGGGATTTTTAT‑CGGCaaa                                                                                                                                                                                                                                >  1:465935/1‑239 (MQ=255)

          tGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCACCCAGGCCGGATTAACGTGATTCTTCT‑CGGCaaa                                                                                                                                                                                                                                >  1:565792/1‑239 (MQ=255)

          tGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGCTTAACGTGATTTTTTT‑CGGCaaa                                                                                                                                                                                                                                >  1:184989/1‑239 (MQ=255)

          tGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTTTTCT‑CGGCaaa                                                                                                                                                                                                                                >  1:431556/1‑239 (MQ=255)

          tGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAAACAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCaaa                                                                                                                                                                                                                                >  1:795679/1‑239 (MQ=255)

          tGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCCGTTTTTTCCGCAAACCAATTAACCCGCCCGGATTCACGGGCTTCTTCT‑CGGCaaa                                                                                                                                                                                                                                >  2:164712/1‑239 (MQ=255)

          tGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATACAGGCGGTAATGCTTCGGCTGGTTTTGCAGCAAACCAATCAACCAGGCCGGATTAAAGGGATTCTTTT‑CAGCaaa                                                                                                                                                                                                                                >  2:832499/1‑239 (MQ=255)

          tGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCAGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATACGATACGCGTTTTCCGCTCACTCAAATACTGCATAAATTTCAGGCGCGTCGGACCATCACGGCGGTAATTCTGCGGATGTTTTTGCAGCAAACAATCCCACCAGGCGGGATTCACGAGAtttcccaccgcaaa                                                                                                                                                                                                                                 >  2:743205/1‑227 (MQ=255)

            cAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCCAACCAATCAACAAGGCCGGATTAACGGGATTCTTCT‑CGGCAAAt                                                                                                                                                                                                                               >  1:422784/1‑238 (MQ=255)

                    ttGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGCTACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTTT‑CGGCAAATTCGTT‑CA‑c                                                                                                                                                                                                                     >  1:36826/1‑238 (MQ=255)

                         aaTGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGcc                                                                                                                                                                                                               <  1:79611/239‑1 (MQ=255)

                               gCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGGAAATTCGAT‑AC‑CCCCGCCTTtctc                                                                                                                                                                                                         >  1:1064784/1‑239 (MQ=255)

                                     gggggCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGAGATTCTTCT‑CGGCCAATTCGAT‑CACCCCCGCCTTTCTCATTa                                                                                                                                                                                                     >  1:504991/1‑238 (MQ=255)

                                         gccgaGAAACCCCCCCGGTTTGCCATTAAGCGATCGCGTTCCTTTCCCATTCACGCATAAACTGGCGTACCCATTCGATCCGCGTTTTCCGCTCACTCAAACCCTGAATAAATTTCAGGCGCTTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAATCCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CC‑CCCCGCCTTTCTCATTACCTTc                                                                                                                                                                                                <  2:141531/234‑1 (MQ=255)

                                          cgcAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCa                                                                                                                                                                                              >  1:814540/1‑239 (MQ=255)

                                                                     aGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGTTTAACGCGATTCTTCT‑CGGCAAATTCAAT‑CA‑CCCCCCCTTTCTCATTACCTTCCAGCTTCCTTAA‑CCCCCATTTCcgcg                                                                                                                                                                     >  2:135761/1‑236 (MQ=255)

                                                                         aTCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGCATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATCCTGCGGCTGCTTTTGCAGGAAACCAAGCAACCAGAGCGGGTTAACGTGACTCTTTT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTTTCACTCACTTCCACCTTCCTCTC‑CCCCAGTTTCTGCCCTTGcgg                                                                                                                                                              >  2:590739/1‑237 (MQ=255)

                                                                         aTCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGGGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCCATACCCTCCCGCCTCCCTGT‑CCCCCGTTTCtaccccctcgg                                                                                                                                                              >  2:763358/1‑229 (MQ=255)

                                                                         aTCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAAAGGGATTCTTTT‑CGGCCAATTCGAT‑CA‑CCCCCCCTTTCCACTTACATCCCACCTTCCTGAA‑CCCCACGTTCttgcatttctg                                                                                                                                                              >  2:386609/1‑229 (MQ=255)

                                                                          tCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGCTTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCCTTCTCATTACCTTCCAGCTTCCGTGT‑TCCCAGTTTCTGCGCTTGCTg                                                                                                                                                              >  1:39986/1‑238 (MQ=255)

                                                                          tCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGCGATTCTTTT‑CGGCAAATTCGTT‑CG‑CCCCGCCTTTCCCATTACCTTCCATCTTCCTTAT‑CCCCaactttggccccttggtg                                                                                                                                                             >  2:433642/1‑222 (MQ=255)

                                                                            cgttttttttCCATTTCCCCCATAACAGGTCGTACCCTTTTTATTCGCGTTTTTCGTCCACTCAAATCCTGATATAATTCCAGGCGCGTCGGACACTCAAGGCGGGAAGGCGGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGAGTAACGGGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGgcg                                                                                                                                                           <  2:628644/231‑1 (MQ=255)

                                                                              tttCTCTTCCAGTTCACGCAAAAACGGGCGTACCCATTCGATACGCGTTTTCCGCTACCTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCa                                                                                                                                                         <  1:1100399/238‑1 (MQ=255)

                                                                                 ctctTCCCGTTCACCCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGAc                                                                                                                                                      <  1:19321/239‑1 (MQ=255)

                                                                                 ctctTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGGTTAACGTGATTTTTCT‑CGGCAAATTCGGT‑CA‑CCCCGCCTTTTCCATTACCTTCCAGCTTCCTGATCCCCCGGTTTCGGC‑CTTGCTgggcccaac                                                                                                                                                      >  2:941485/1‑232 (MQ=255)

                                                                                 ctctTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGAc                                                                                                                                                      <  1:219922/239‑1 (MQ=255)

                                                                                 ctctTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCCGGCGCAGAc                                                                                                                                                      >  1:805688/1‑239 (MQ=255)

                                                                                    ttCCAGTTCCCGCATAAACTGGCGTCCCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACggg                                                                                                                                                   <  1:832499/239‑1 (MQ=255)

                                                                                    ttCCAGTTCACCAATAAACTGGCGTACCCATTCTATCCGGTTTTTCCGATCAGCAAAACCGCGAAAAAATTTCAGGCGCGGCGGACCACCAAGGCGATAAGGCTGCGGCTGTTTTTGCAGCAACCCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CC‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACggg                                                                                                                                                   <  2:184989/239‑1 (MQ=255)

                                                                                      ccAGTTCCCCAATAAAGTGGGTTTCCCATTGGATACGGTTTTTCCCGTCCCCAAAACTCTGAATAAATTTCAGGCGCCTCGGACCATCAAGGCGGTAATGCTGCGGCTTTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGGGATTCTTCT‑CGGCAAATTCGAC‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCa                                                                                                                                                 <  2:431556/239‑1 (MQ=255)

                                                                                      ccAGTTACCGCATAAACTGGCGTACCCTTTCGATCCGCGTTTTCCGCTCCCTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCa                                                                                                                                                 <  2:53017/239‑1 (MQ=255)

                                                                                        aGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGCTTCTTCT‑GGGCAAATTCGCT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGCT‑CCACAGTTTCTGCGCTTGCTGCGCCAGCCGGGCAat                                                                                                                                               >  1:515506/1‑239 (MQ=255)

                                                                                          ttCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCt                                                                                                                                                                                       >  1:110278/1‑198 (MQ=255)

                                                                                           ttccccATAACCCGGTGTCCCCATTGGATACCCGTTTTCCGCCCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATc                                                                                                                                            <  2:805688/234‑1 (MQ=255)

                                                                                            cACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGGTTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCCGTTTCTGCCCTTGCTGGCGCAAACGGGCAATATcc                                                                                                                                           >  1:544722/1‑239 (MQ=255)

                                                                                            cACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGCTTAACGGGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGTTGGCGCAGACGGGCAATATca                                                                                                                                           >  1:299952/1‑238 (MQ=255)

                                                                                              cGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCCTTACCTTCCAGCTTCCTGAT‑CCCCAGATTCTGCGCTTGCTGGCGCCGCCGGGCAATATCca                                                                                                                                          >  1:477515/1‑238 (MQ=255)

                                                                                              cGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGGAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGGGATTCTTCT‑CGGCAAATTCGAT‑CC‑CCCCGCCCTTCTCATTACCTTCCCACTTCCTGAT‑CCCCCAGTTCTGCGCTTGTTGGCGCCACCGGGCAataccaac                                                                                                                                         >  2:410301/1‑234 (MQ=255)

                                                                                                caaataccggcctccccAGTCGATGCGGGTTCTCCGCTCCCTAAAAGCCTGAATAAATTTCAGGCGCGAGGGACCATCAAGGCGGTAATGCGGCGGCTGTTTGTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CTCCGCCTGTCTCATTCCCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCcagca                                                                                                                                       <  2:991734/225‑1 (MQ=255)

                                                                                                    aaCTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CCGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAACTTCCCTAT‑CCCCACTTTTTCCGCTTGCTCGCCCACACGGGCAAAATCcacccaggt                                                                                                                                   >  2:764487/1‑232 (MQ=255)

                                                                                                     ccTGGCGTCCCCGTTCGATCCGGGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCCCCTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAATCCAATCAACCAGGCCGGATTAACGTGATTCTTCC‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTa                                                                                                                                  <  1:209273/238‑1 (MQ=255)

                                                                                                         gCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCCAACCAATCAACCAGGCCGGATTAACGGGATTCTTTT‑CGGCAAATTCGGT‑CA‑CCCCGCCTTTTCCATTACCTTCCACCTTCCCGGT‑CCCCAGTTTCGCCGCTTTCTGGGGCAACCGGGCCAAATCcacacggggacagc                                                                                                                              >  2:1013651/1‑227 (MQ=255)

                                                                                                         gCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCa                                                                                                                                                 >  2:283113/1‑220 (MQ=255)

                                                                                                         gCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCa                                                                                                                                                 <  1:283113/220‑1 (MQ=255)

                                                                                                         gCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTAcgc                                                                                                                               >  1:806643/1‑238 (MQ=255)

                                                                                                         gCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑AA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CGCCAGATTCTGCGCTTTCTGTCGCAGACGGGCAATATCCAGCAGGGtcagc                                                                                                                               >  1:1040387/1‑234 (MQ=255)

                                                                                                          cttACCCATTCGATTCGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTAcgcg                                                                                                                              <  1:135761/236‑1 (MQ=255)

                                                                                                                 aTTCGATTCCCGGTTTCCGCTCACTCAAAGCCTGAATAAAGTTCGGGCGTGCCGGACCAGCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGAAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CC‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCt                                                                                                                      <  2:379834/239‑1 (MQ=255)

                                                                                                                   tCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTACTGCTGCGGCTGTTTTTGCAGCAAACCAAACAACCAAGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CC‑CCCCGCCCTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCCGTTTCTGCGCTTTCTGGCCCCACCGGGCAATATCCAGCCGGGGACCCGCCGGATCTgg                                                                                                                    >  2:923173/1‑239 (MQ=255)

                                                                                                                     gATCCGCGTTTTCCGCTCCCTCAAACCCTGAATAAATTTCAGGGCCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CC‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGgca                                                                                                                  <  1:521570/239‑1 (MQ=255)

                                                                                                                             ttttCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCCGCAGGCCg                                                                                                          >  1:687710/1‑239 (MQ=255)

                                                                                                                               ttCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACCGGCAATATCCAACAGGGTACGGGCCGGATCTGGCAGCAGGCCGaa                                                                                                        >  1:390809/1‑239 (MQ=255)

                                                                                                                                tCCGTTCACTCAAATCCTGAATAAATTTGCGGCCAGTCGGACCATCAAGGCGGTAATGCTGCCGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAG‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAg                                                                                                       <  1:671091/239‑1 (MQ=255)

                                                                                                                                  cGCTCCCTAAAATCCTGAATAAATTTCAGGCGCGCCGGACCAGCAAGGCGGTAATGTTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CT‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGcg                                                                                                     <  2:795679/239‑1 (MQ=255)

                                                                                                                                  cGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAACCCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGcg                                                                                                     <  1:941485/239‑1 (MQ=255)

                                                                                                                                   cctcctctaaaCCCTGAAAAATTTCCGGGCGCCTCGGACCATCCAGGGGGTAAGGCCGGGGCTGTTTTGGCAGCAAACCAATCAACCAGGCCGGATTAACGGTATTCTTCC‑CGGCAAATTCGATCCC‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGcg                                                                                                     <  2:504991/231‑1 (MQ=255)

                                                                                                                                       cctcaAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTAcgcg                                                                                                                              <  1:483036/208‑1 (MQ=255)

                                                                                                                                             atcatggaaaaattgtcagcgcGTCGCAACACAAAGGGGGTTATGCGGGGGCTTTTTGTGCAAGAAACCAATCAACCAGGCCGTGTTAAGGTGATTCCTCT‑CGGCAAATTCGAT‑CC‑CCCCGCCTTTCTTATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGCACGCGCCGGATCTGGCAGCAGGCCGAAGCTATCGATAAGCt                                                                                          <  2:618694/221‑1 (MQ=255)

                                                                                                                                             acccttattaaatttccgcgggctCGGAACAGCAAGGCGGTAAAGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCt                                                                                          <  2:365245/216‑1 (MQ=255)

                                                                                                                                              tCCTGAATAAATTTCAGGCGCGTCGGACCACCAAGGGGGTAATGCGCCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCa                                                                                                                                                 <  2:532791/183‑1 (MQ=255)

                                                                                                                                                   aaataaTTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTCCGGCTGTTTTTGCAGCAAACCAATCACCCCGGCCGGATTAACGTGATTCGTCT‑CGGCAAATTCGAT‑CC‑CCCCGCCTTTCTCATTACCTTCCATCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACtt                                                                                    <  2:1064784/235‑1 (MQ=255)

                                                                                                                                                   aaTAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCCATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCCAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCATCTTCCTGAT‑CCCCAGTTTCTCGCCTTGCTGGCGCGGACGGGCAATATCCAGCAGGGTACGCCCCCGACCTGGGCGCAGCACGAAGAGATCGAAAAACCCGa                                                                                       >  2:299008/1‑236 (MQ=255)

                                                                                                                                                   aaTAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCCGGCCGGATTAACGTGATTCTTAT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCACCAGGGTACCGGCCGGATCTGGCAGCAGGCCGCAGCGAACGATAAGCACGACtt                                                                                    >  1:407341/1‑239 (MQ=255)

                                                                                                                                                   aaTAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCCGCTTCCTGAT‑CCCCAGTTTCTGCGCTTTCTGGCCACAACGGGCAAACTCCCGCAGGGAACGCCCCGGATCTGGCCGCAGGCGGaaaggagcggaaaacgagactt                                                                                    >  2:730520/1‑219 (MQ=255)

                                                                                                                                                   aaTAAATTTCAGGCGCGTCGGAACATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGGGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCACGCCTTTCTCATTACCTTACAGCTTCCTGAT‑ACCCCGTTTCTGCGCCTGCTGGCGCCGACGGGCACTATCCCGCCGGGGACGCCCCGGCTCTGGCAGCGGGCCGacacgctaggaaagcagcaatt                                                                                    >  2:630093/1‑218 (MQ=255)

                                                                                                                                                        aTTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCcagca                                                                                                                                       >  1:532791/1‑183 (MQ=255)

                                                                                                                                                        aTTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGAGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGAACGCGCCGGACCTGGCAGCAGGCCCAAGCGATCGATAAGCTCGCCTTTGa                                                                                 >  1:1011151/1‑237 (MQ=255)

                                                                                                                                                             aGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCtt                                                                           >  1:17806/1‑238 (MQ=255)

                                                                                                                                                               gcgcGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCCGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGTACTCTTc                                                                          >  1:713026/1‑237 (MQ=255)

                                                                                                                                                                                    gttattcggggggtGTTTTTGCCACAAACCCAGCAACCAGGCCGGTTTAACGTGATTCTTCT‑CGGCAATACCGAT‑CC‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGgcg                                                    <  2:17806/225‑1 (MQ=255)

                                                                                                                                                                                    gTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCCCGACTTTGATCTCTTCCAGt                                                                      >  1:1062405/1‑220 (MQ=255)

                                                                                                                                                                                     tAATGCTGCGGCTGATTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑TA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTCCGCTTGCTGGCGCAGACGGGCAATATCCAGTAGGGTACCCGCCGGCTCTGGCAGCAGGCCCAAACGATCGCTAAGCTCAACTTTGATCTCTTCCAGTTCGTTTTCCCTTTTGgc                                                     >  1:664638/1‑236 (MQ=255)

                                                                                                                                                                                          tgcggtcTGTTTTTGCCGCAACTCAACCAACACGGCCCGTTTACCGTGATTCTGCC‑CGGACAATTCCAT‑CC‑CCCCGCCGTTCTCATGTCCTTCCAGTGTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGGaa                                             <  2:515506/233‑1 (MQ=255)

                                                                                                                                                                                          ctgcGGCTTTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CC‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCaa                                             <  1:511656/239‑1 (MQ=255)

                                                                                                                                                                                           cgcGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGGT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCaa                                             <  1:1013651/237‑1 (MQ=255)

                                                                                                                                                                                            gcGGCTGTTTTGGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATa                                           <  1:386609/239‑1 (MQ=255)

                                                                                                                                                                                             cGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATAc                                          >  1:117114/1‑239 (MQ=255)

                                                                                                                                                                                                   tttttCCAACAAACCTATCAACCAGGCCGAATTAACGTTTTTCTTCT‑CGGCAAATCCGAT‑CT‑CCCCGCTTTGCTCATTACCTTCCAGCTTCCTAAT‑CCCCAGTTTCGGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATACGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACCTTTGt                                    <  2:533306/239‑1 (MQ=255)

                                                                                                                                                                                                     tttcactcacaCCAATCCCCCCGGCCGTATTTACGTTTTTTTTCG‑CGACAAATTCGTT‑CC‑CCCCGCCGTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCCGTTTCGGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAg                                  <  2:422784/229‑1 (MQ=255)

                                                                                                                                                                                                            caACCCATTCACCCAGGCCGTTTTATCTGTATTTTGCT‑CGGCAAATTCGAC‑CC‑CCCCCCCTTTCTCATTCCCTTCCAGTTTCCTGAT‑CCCCAGTTTCTGCGCTTGCGGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACa                           <  2:544722/239‑1 (MQ=255)

                                                                                                                                                                                                            caAACCAATCAACCAGGCCGGATTAACGTGATTCTTCC‑CGGCAAATTCGAT‑CC‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACa                           <  1:730520/239‑1 (MQ=255)

                                                                                                                                                                                                                 caaaccaCCAGGCCGAGTTAACTGTCTTCTTCT‑CGGCAAATTCGAC‑CC‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAAGATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGAcgc                      <  2:228366/233‑1 (MQ=255)

                                                                                                                                                                                                                      caCCAGGCCGGTTTGACGTTTTTCTCCT‑CGGCAAAGTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGtt                 <  2:63490/238‑1 (MQ=255)

                                                                                                                                                                                                                      accccggCCGTATTTACGTGTTTCTTCT‑GCGCAAATTCGAT‑TC‑CCCCGGCTTTCTCATTCCCTTCCAGCTTCCTGAT‑CCCCATTTTCTGCGCTGGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGtt                 <  2:477515/234‑1 (MQ=255)

                                                                                                                                                                                                                      aaccgggcagttttACCGTGCTTCTTCT‑CGGCAACTTCGTT‑CC‑CCCCGCCTTCATCATTACCTTCCAGCTTCCTGCT‑CCCCAGTTTCTGCGCTTGCTGGGCCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTGTGATCGCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGtt                 <  2:637864/227‑1 (MQ=255)

                                                                                                                                                                                                                          aGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTGGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGCCAATCGGTTTGAGGACGGACAGCCGCGCGtttagt             >  1:938587/1‑235 (MQ=255)

                                                                                                                                                                                                                            gCCGGTTTCACTTGATTCTTCC‑CGGAAAATCCGCT‑CA‑CCCCCCCTTTCCCATTGCCTTCCAGCTTCCGGAC‑CCCCGGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTc           <  2:117114/239‑1 (MQ=255)

                                                                                                                                                                                                                             ccGGATTAACCTG‑TTCTTTTCCGCCAAATTCCAT‑CC‑CCCCTGCTGTCTCATTACCTGCCAGCTTCCTGAT‑CCCCAGTTTCGGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTc           <  2:36826/238‑1 (MQ=255)

                                                                                                                                                                                                                                     ccGTGATTCTTCT‑CGGCAAATTCGAT‑CC‑CCCCGCCTTTCTCATTCCCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGATGaa  <  1:278008/238‑1 (MQ=255)

TGCAGGGAAGTGCAAAGAATTTGTAAATGTTGCAGATGGGGGCGCAGAAACGCCCCCGATTTACCATTAAGCGATCGCGTTCTCTTCCAGTTCACGCATAAACTGGCGTACCCATTCGATACGCGTTTTCCGCTCACTCAAATCCTGAATAAATTTCAGGCGCGTCGGACCATCAAGGCGGTAATGCTGCGGCTGTTTTTGCAGCAAACCAATCAACCAGGCCGGATTAACGTGATTCTTCT‑CGGCAAATTCGAT‑CA‑CCCCGCCTTTCTCATTACCTTCCAGCTTCCTGAT‑CCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAATATCCAGCAGGGTACGCGCCGGATCTGGCAGCAGGCCGAAGCGATCGATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGATGAA  >  NC_000913/1170452‑1170919

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`