| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,842,793 | T→G | 24.6% | G141G (GGT→GGG) | gdhA → | glutamate dehydrogenase, NADP‑specific |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,842,793 | 0 | T | G | 24.6% | 117.8 / 2.7 | 70 | G141G (GGT→GGG) | gdhA | glutamate dehydrogenase, NADP‑specific |
| Reads supporting (aligned to +/- strand): ref base T (21/28); new base G (18/3); total (39/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.33e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTCGCGTGGTATGGGTTGATGATCGCAACCAGATACAGGTCAACCGTGCATGGCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCTTCACCGGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGG > NC_000913/1842558‑1843011 | ttCGCGTGGTATGGGTTGATGATCGCAACCAGATACAGGTCAACCGTGCATGGCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGTTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGt < 1:239747/236‑1 (MQ=255) cgTGGTATGGGTTGATGATCGCAACCAGATACAGGTCAACCGTGCATGGCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGCGGTAAAGGCGGCAGCGATTTCGATCCGCACGGAAAAACGGAAGGGGAAGGGa > 1:1072095/1‑239 (MQ=255) cgTGGTATGGGTTGATGATCGCAACCAGATACAGGTCAACCGTGCATGGCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAAAAAACCTTCAAAAATGCCCCTACTCCTCTGCCGATGGGCGGTGGTCAAGGCGGCACCGATTTCGATCCGACAGGAAAAAGCGAAGGTGagggga > 1:1043013/1‑234 (MQ=255) cgTGGTATGGGTTGATGATCGCAACCAGATACAGGTCAACCGTGCATGGCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAAGCGGTATGCGCTTCCATCCGTCCGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTAATCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGACTTCGATCCGAAAGGAAAAAGCGAAGGGGAAGTGa > 1:113858/1‑239 (MQ=255) ggttggggTTGATGATCGCAACCAGATACAGGTCAACCGTGCATGGCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATg < 1:876643/233‑1 (MQ=255) atgatCGCAACCAGATACAGGTCAACCGTGCATGGCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGGGGCAGCGATTTCGATCCGAAAGGAAAAAACGAAGGTGAAGAGATGCGGTTTTGCCAg > 1:779155/1‑239 (MQ=255) atgatCGCAACCAGATACAGGTCAACCGTGCATGGCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCCATGGGCGGGGGGAAAGGGGGCAACGATTTCTGTCCCAAAGGAAAAAGGGAGGGGGAAGGGGTGGGGTTTTGccca > 2:600462/1‑237 (MQ=255) tgatCGCAACCAGATACAGGTCAACCGTGCATGGCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCCGTTAACCTTTCCATTCTCAAATTTCTCGGCTTTGAAACAACCTTCCAAAATGCCCTGACCACTCTACCCATGGGCGGTGGGCAAGGCGGCCGCGATCTCTAGCCGCAAGAAAAAAGCGAAGGGGaacagtgggggttttgacacg > 2:317691/1‑220 (MQ=255) tgatCGCAACCAGATACAGGTCAACCGTGCATGGCGTGTGCAGTTCAGCTCTGCCATCGGACCGTAAAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCCAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGGAGTGATGCGGTTTTGCCAgg > 1:860743/1‑239 (MQ=255) actccacaccactaaaGGTAAACCGGGGCTGGCGTGTGCCGTTCAGCTCTGCCATCGGCCCGTACCAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCCCAAATTCCTCGGCTTTGAACAAACTTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGgcg < 2:959787/224‑1 (MQ=255) cGCAACCAGATACAGGTCAACCGTGCATGGCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAACGGCGGCAGCGATTTCGATCCGAAAGGCAAAAGCGAAGGGAAAGTGTTGCGGTTTTGCCAGgcgag > 1:406349/1‑237 (MQ=255) cGCAACCAGATACAGGTCAACCGTGCATGGCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGGAAGGGAAAAACGAAGGGGAAGGGGTGCGTTTTTGCCAggg > 1:467454/1‑235 (MQ=255) cGCAACCAGATACAGGTCAACCGTGCATGGCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCACCGATTTCGATCCGAAAGGAAAAAGCGAAGGGGAAGGGATGCGGTTTTTCCAGgc > 1:181974/1‑236 (MQ=255) cGCAACCAGATAACGGGCAACCGTGCATGGGTGGTGCATTTCCGCCTTGCCAGCGGCCCGTACAAAGGCGGTTTGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑Ct < 2:329027/239‑1 (MQ=255) cAACCAGATACAGGTCAACCGTGCATGGCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGGAAGGAAAAAGCGAAGGTGAAGTGATGCGGTTTTGCCAGGCG‑Ctga > 1:3138/1‑239 (MQ=255) ccccagctgcctgtaacccGTGCATGGCGTGTGCAGTTCCGCTCTGCCATCGGCCCGTACAAAGCCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGCAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑Ctga < 2:406349/221‑1 (MQ=255) aaCCAGATACAGGTCAACCGTGCATGGCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑Ctga < 1:1077401/238‑1 (MQ=255) tACAGGTCAACCGTGCAGGGCTTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTg < 1:621734/237‑1 (MQ=255) aGGTCAACCGTGCATGGCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGGGAAGGGATGGGTTTTTGGCAGGCG‑CGGCTGACCGACC‑tt > 1:166026/1‑238 (MQ=255) gTCAACCGTGCATGGCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCCAATTCCTCGGCTTTTAACCACCCCTCAAAAATGCCCTTACTACCCTGCCGATGGGGGGTGGTAAAGGCAGCAGCGGTTTCGATCCCAAAGGAAAACGGCCGGGTCACGTGAGTCGTTTTTCCCAGgccgcgtagaacaaacagt > 2:621734/1‑221 (MQ=255) gTCAACCGTGCATGGCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAACGAAGGGGAAGTGATGCGTTTTTGCCAAGCG‑AGTATGACTGAAA‑Tgga > 1:911469/1‑237 (MQ=255) gTCAACCGTGCATGGCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAAGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAACGTGAAAGGATGGGTTTTTGCAAGGCG‑TTGATGACTGAAC‑Tga > 1:437576/1‑237 (MQ=255) gTCAACCGTGCATGGCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGGGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAACGAAGGGGAAGGGAGGCGTTTTTGCAAgggcctgtggaacgaacttg > 1:959972/1‑220 (MQ=255) gTCAACCGTGCATGGCGCGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGGATGCGCTTCCATCCGGCAGTTAACCTTTCCATTCTCAAATTCCTCGGCCTTGAACAAACCTTCAAAAATGACCCGACTAACCTGCCGCTGGGCGGGGGTAAAGGGCGCAGCGATTTCGGTCCGCACGGAAACACCGAAGGGGAAGTAGCTCGTTTTTGTCAGGAG‑CTGAGGAcgtaccctg > 2:85577/1‑230 (MQ=255) aCCGTGCATGGCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGGAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGGGAAGGGATGCGTGTTTGCCAGGGG‑CGGGTGACTTAAC‑GGGATCg > 1:181333/1‑238 (MQ=255) tGCATGGCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTACATTTTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGGAAAAGCGCAGGTGGAGGGATGCGGTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTAACGCCAcc > 1:255870/1‑239 (MQ=255) cGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGGGAAGGGATGCGTTTTTTCCAGGCG‑CTGAGGACTGAAC‑CGGATGCCCACCTggggcg > 1:1061745/1‑236 (MQ=255) gtgCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGGGAAGTGATGGGTTTTTGCCAGGCG‑CCGATGACTGAAC‑TGTATCGCACCCCGGGCGCGGa > 1:944867/1‑239 (MQ=255) tgCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGGGATGCGTTTTTGCCAGGCG‑CTGGTGACTGAAC‑TGTATCGCCACCTGGGCGCGGAt > 1:973077/1‑239 (MQ=255) ttCAGCTCTGCCATCGGCCCGTACAAAGGCGGTCTGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAGATTCCTCGGCTTTGAACAAACCTTCAAAAAGTCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGACTGGATTTCGATCCGAATGGAAAAACCGGATGGTAAGTGAAGCGGTTTTGCCCGGGT‑CTGTGGACTGGAC‑GGCAACACCACCGGGgccgggacacgac > 2:431955/1‑228 (MQ=255) ctctGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGGGGTAAAGCCGGCAGCGACTTCGATCCGAAAGGAAAAAGCGCAGGTGAAGGGAGGCGTTTTTGTACTGGG‑CTGCTGAC‑GAACATGTAAGGCCACCTGGGCGCGAAGACAGACGTTc > 2:56743/1‑239 (MQ=255) tGCCCTCGGCCCGTACAAAGGCGGTTTGCGCTTCCACCGGTACGTTAACCTTTCCATTCCCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCgg < 2:982006/239‑1 (MQ=255) ccATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGGGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCa > 1:257430/1‑239 (MQ=255) ccATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAAACTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGGGAAGCGATGCGGTTTTGCCAGGCG‑CTGATGACTGAAC‑TGATTCGCACCCTGGGCCGGGATACCGACGGTCCGGcc > 1:53692/1‑238 (MQ=255) ccATCGGACCGTACAAAGGCGGGTTGCGCATCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGTCTTTGAACAAACCTTCAAAAATGCCCTGACTAATCAGCCGATGGGCGGAGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGGGAAGTGATGCGTTTTTTCCGGGCGACAGA‑GAATTAAC‑GGTATCGACACCTggggggggtaacgcaggtaaccagg > 2:338498/1‑217 (MQ=255) tCGGCCCTTACAAAGGCTGTATGCGCTTCCATCCGTCAGTTATCCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGt < 2:467454/239‑1 (MQ=255) ctcgacaaggggcgttttggcTTCCAACAGTCCATTAACCTTTCCATGTTCAAATTCCCGGGCTTTCGAAAAACCCTCAAAAATGCCCTGACTACGCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGatat < 2:386490/220‑1 (MQ=255) cccgaCAATGGCGTTTTGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCACGGCTTTGAACAATCCTGCAAAAATGCCCTGACCACCCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGatat < 2:85741/235‑1 (MQ=255) cGTACAAGGGGGGTATGCGCTTCCATCCGTCAGTTACCCTTTCCATTCTAAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGatat < 1:1067332/238‑1 (MQ=255) cGGTATGCTCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTtgg < 2:966172/237‑1 (MQ=255) gcccTTCCATCCGGCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTg < 1:259426/236‑1 (MQ=255) cTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAGAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGGGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCCCGGTTACCACCGTTCCGGCAGGGGATATCGGGGTTGGTGGTCGTGAAg > 1:500249/1‑239 (MQ=255) ttCCATCCGTAAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGt < 1:861920/239‑1 (MQ=255) ccATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGGGGTAACGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGGGATGCGTTTTTGCCAGGCG‑CTGATGACGGAAC‑TGTATCGCACCCTGGGCGCGGATACCGCAGTTCGGGCAGGGGCTATCgggggttgggggggggaaggcg > 2:861920/1‑221 (MQ=255) tttccTTTCCATTCTAAAATTTGTCGGCTTTGACCAAACCTTAAAAAAGGCCCTGTCTACTCGGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTTTCGCCACCTGGGCGCGGATCCCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCg < 2:467483/235‑1 (MQ=255) tctcAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGaaaa < 1:285658/239‑1 (MQ=255) ctcAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGGGGGCGTGAAGTAGGCTTTATGGCgggggggttggaaaa > 1:646622/1‑228 (MQ=255) tcAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGACGGTGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGGATCGCCACCTGGGCGCGGATACCGCCGTTCCGGCAGGTGATATCGGGGTTGGGGGGCGGGAAGTCGGCTTTTTGGCgggggggggaagaaaa > 2:642919/1‑227 (MQ=255) tcAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGTTACCGACGTTCCGGCAGGTGATATCGGGGCTGGAGGTCGCGAAGTCGGCTTTATGGCGGGgaggtcggaaaaa > 1:1075669/1‑228 (MQ=255) tattcctcccgtttgtaaccaacTTCAAAACTGCGCTGTCTCCTCTGCCGAGTGGCGTGTGTAAAGGCGGCAGCTATTTCGTTCCGAAAGGAACACGCGAAGTGGCAGTGTTGCGTTTTTGCCAGGCT‑CTTATGACTGAAG‑TGTATCGCCACCTGGGCGTGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAACTCTGCTTTATGGCGGGGATGATGAAAAAGctc < 2:297510/217‑1 (MQ=255) aaTTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGctc < 1:388481/239‑1 (MQ=255) aaTTCCCGGGCTTTGAACAAACCCTCAAAAATCCCCCGACTACCAGGGCCATGGGCGGTGGTAAAGGCTGCAGCGATGTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGctc < 2:911469/239‑1 (MQ=255) cGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGt < 2:860116/201‑1 (MQ=255) cGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGt > 1:860116/1‑201 (MQ=255) tGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGGGATATCGGGGTTGGTGGACGGGAAGCCGGCTTTATGGCGGGGGGGATGacaaaaaagtcccacaacacc > 1:704728/1‑222 (MQ=255) aaaacccTCCAAAAATCCCTTGACAACTCTGCCGAGGGGGGTTGGTAAGGGGGGCAGCGTTTTCGATCCAAAAGGAAAAGGCGAGGTTGAAGTGGTGCTTTTTTGCCGGTCG‑CTGATGACTGAAC‑TGTATCGCCCCCGGGGCGCGGATCCCGACGTCCCGGCAGGTGATATCGGGGTTGTTGTTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCACCAATCCCGCCt < 2:113858/234‑1 (MQ=255) aCCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCg < 2:328754/169‑1 (MQ=255) aCCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCg > 1:328754/1‑169 (MQ=255) aCCTTAAAAAAGGCCCTGACTACTTGGCCGATGGGGGGTGGTAAAGGCGGCAGCGATTCCGATCCGAAAGGAAAAAGGGAAGGTAAAGTGATGCTTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGt < 1:578378/239‑1 (MQ=255) cAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCTGAAAGGAAAAAGCGAAGGTGAAGTGATGCATTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGGGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTagg > 1:350735/1‑191 (MQ=255) cAAAAATCCCCTGCTTCCTGTGCGGGGGGGCGGGTGAAAAGGCGGCGGCGATTTCGATCCGAAGGGAAAAAGCGAAGGGGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGATC‑TGTACCGCCACGGGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGGCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCTTCa < 2:854185/239‑1 (MQ=255) cccttgatctcttggcGAGGGGGGGTGGTAAAGGCGGCAGCGTTTTGGATCCGAAAGGAAAAAGCGAGGTTGAAGTGTGGCTTTTTGGCCAGGGG‑CTGATGACTGAAC‑GTTATGGCCACCTGGGGGCGGATACCGCGTTTCCGGCAGGTGATATCGGGGTTGGTGGTCGGGAAGCCGGCTTTATGGCGGGGATGATGAAAAGGCTCTCCAACAATACCGCCTGCGTCTTCACCGGTaa < 2:3138/223‑1 (MQ=255) cccggaattctcgGCCGATGGGCGGGGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCTTCACCGGTAAg < 1:613879/230‑1 (MQ=255) ccggACTTCCCTGGCGAGGGGCGGGGGTAAGGGGGGCAGGGATTTGGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑TTGATGACTGAAC‑TGTATGGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGGGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCTTCACCGGTAAg < 1:85577/235‑1 (MQ=255) ctctGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAGAAAAACCTCCCACAACAACACCTCCCGCTTCCCCGGCGAGGGGCTTTCa > 1:643894/1‑239 (MQ=255) ggggggggTGGTAAAGGGTGCGGGTTTTCCGAGCCGAAAGGAAAAAGCGAAGGTGAAGTTATGCGTTTTTGGCAGGCC‑GTGATGACTGAAT‑TTTACCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGAGGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCTCCACCGGTAAGGGCCTTTCATTTggcgg < 2:181333/237‑1 (MQ=255) tgggggggtttAAGGGGGGGAGCGTTGTCGACCGGAGGGGAAAAAGAGAAGGGTGAGTGAGGTGTTTTTGCGGGGCG‑TCGATGACTAAAT‑TGTCTCGCCCCCTGCGCGCGTATCCCGGAGTGCCGGGAGTTGATTCCGGGGGTGTTGTTCGTGAAGCCGGCTTTATGGCGGGGATGATGAAAAAGCTCCCCACCAATGCCGCCTGCGTCTTCACCGGTAAGGGCCTTTCATTTggcgg < 2:591259/228‑1 (MQ=255) cAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCG‑TTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGaaa > 1:775231/1‑162 (MQ=255) cAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCG‑TTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGaaa < 2:775231/162‑1 (MQ=255) gATTCCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCCCCAACAATACCGCCTGCGTCTTCACCGGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTa < 1:600462/238‑1 (MQ=255) aaaGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAAGATTCCCACAATAACGCCCGCGGCTTCCCCCGTGAGGGCCTTTTCTTTTTCGGGAGTCTTATTTTCCCCGCAGCCACCCGccccgg > 1:465290/1‑231 (MQ=255) | TTCGCGTGGTATGGGTTGATGATCGCAACCAGATACAGGTCAACCGTGCATGGCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCG‑CTGATGACTGAAC‑TGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCTTCACCGGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGG > NC_000913/1842558‑1843011 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |