| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,490,509 | T→C | 17.7% | G480G (GGA→GGG) | oxc ← | oxalyl CoA decarboxylase, ThDP‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,490,509 | 0 | T | C | 17.7% | 121.9 / 2.2 | 62 | G480G (GGA→GGG) | oxc | oxalyl CoA decarboxylase, ThDP‑dependent |
| Reads supporting (aligned to +/- strand): ref base T (27/22); new base C (3/9); total (30/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.06e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
GGTAATATGGCCACTTTCAGTTCCTGCTGCAGGGTCGATGACCACATTAATAATGGTCGGTTTGCGCGACTGAATACCGGTGGTTAAAGCATGACGAAGTTCATCTGTCGTGGTGACGTTATAGCCAACGCCACGAAACGCATCCATTAATTTGTCATACCTTGCATGGTGCAACAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT‑GACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCA > NC_000913/2490287‑2490746 | ggTAATATGGCCACTTTCAGTTCCTGCTGCAGGGTCGATGACCACATTAATAATGGTCGGTTTGCGCGACTGAATACCGGTGGTTAAAGCATGACGAAGTTCATCTGTCGTGGTGACGTTATAGCCAACGCCACGAAACGCATCCATTAATTTGTCATACCTTGCATGGTGCAACAGATCCGTTGGTGATGGTGCACCACCGCCCCTGAGAT‑CAAAACCGTCTCCTCTCTAGATgcagc > 1:397656/1‑239 (MQ=255) tGGCCAGTTTCAGTTCCTGCTGCAGGGTCGATGACCACATTAATAATGGGCGGTTTGCGCGACTGAATACCGGTGGTTAAAGCATGACGAAGTTCAACTGTCGTGGTGACGTTATGGCCAACGCCACGAAACGCATCCATTAATTTGTCATACCTTGCATGGTGCAACAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCattatt < 1:233526/239‑1 (MQ=255) tGGCCACTTTCAGTTCCTGCTGCAGGGTCGATGACCACATTAATAATGGTCGGTTTGCGCGACTGAATACCGGTGGTTAAAGCATGACGAAGTTCATCTGTCGTGGTGACGTTATAGCCAACGCCCCGAAACGCATCCATTAATTTGTCATACCTTGCATGGTGCAACAGATCCGCTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACAACACCCCCTCTGAAGATGCCGCCaataat > 2:337087/1‑237 (MQ=255) tGGCCACTTTCAGTTCCTGCTGCAGGGTCGATGACCACATTAATAATGGTCGGTTTGCGCGACTGAATACCGGTGGTTAAAGCATGACGAAGTTCATCTGTCGTGGTGACGTTATAGCCAACGCCACGAAACGCATCCATTAATTTTTCATACCTTGCATGGTGCAACAAATCCGTTGGTGCTGGTGCACCAGCGCCACGGAGATAAAACACTGtctcttataaaaaatggaacccgcc > 2:371459/1‑218 (MQ=255) tttCAGTTCCTGCTGCAGGGTCGATGACCACATTAATAATGGTCGGTTTGCGCGACTGAATACCGGTGGTTAAAGCATGACGAAGTTCATCTGTCGTGGTGACGTTATAGCCAACGCCACGAAACGCATCCATTAATTTGTCATACCTTGCATGGTGCAACAGATCCGATGGTGATGGGGCACAAGCGCCACTGAGAT‑CAACACCGTCTCATCTGTAGATGCCGCCATTATTAAAAATa > 1:469605/1‑239 (MQ=255) caTTAATAATGGTCGGTTTGCGCGACTGAATACCGGTGGTTAAAGCATGACGAAGTTCATCTGTCGTGGTGACGTTATAGCCAACGCCACGAAACGCATCCATTAATTTGTCATACCTTGCATGGTGCAACAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCCACaa > 1:677493/1‑239 (MQ=255) caTTAATAATGGTCGGTTTGCGCGACTGAATACCGGTGGTTAAAGCATGACGAAGTTCATCTGTCGTGGTGACGTTATAGCCAACGCCACGAAACGCATCCATTAATTTGTCATACCTTGCATGGTGCAACAGAACCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCCCCTCTGTAGATGCCCCCATTATTAAAAATAAAGAACGTCACCGGCAGGTTTAATCGCCaa > 2:1016701/1‑239 (MQ=255) atGGTCGGTTTGCGCGACTGAATACCGGTGGTTAAAGCATGACGAAGTTCATCTGTCGTGGTGACGTTATAGCCAACGCCACGAAACGCATCCATTAATTTGTCTTACCTTGCATGGTGCACCAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGGAGATTCCCACATTATTACAAATAAAGCTCCTCACCGGCAGGTTAATTCGCAAAAACGttta > 2:883263/1‑238 (MQ=255) tGGTCGGTTTGCGCGACTGAATACCGGTGGTTAAAGCATGACGAAGTTCATCTGTCGTGGTGACGTTATAGCCAACGCCACGAAACGCATCCATTAATTTGTCATACCTTGCATGGTGCAACAGATCCGTTGGGGATGGTGCACCATCGCCACTGAGAT‑CAAAACCGTCCCCCCTGTAGATGCCGCCATTATTAAAAATAACGAACGCCACCGGCAGGTTAAATCGACAAAACGtttaa > 2:216745/1‑237 (MQ=255) gTCGGTTTGCGCGACTGAATACCGGTGGTTAAAGCATGACGAAGTTCATCTGTCGTGGTGACGTTATAGCCAACGCCACGAAACGCATCCATTAATTTGTCATACCTTGCATGGTGCAACAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGa < 1:248979/202‑1 (MQ=255) gTCGGTTTGCGCGACTGAATACCGGTGGTTAAAGCATGACGAAGTTCATCTGTCGTGGTGACGTTATAGCCAACGCCACGAAACGCATCCATTAATTTGTCATACCTTGCATGGTGCAACAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGa > 2:248979/1‑202 (MQ=255) gTCGGTTTGCGCGACTGAATACCGGTGGTTAAAGCATGACGAAGTTCATCTGTCGTGGTGACGTTATAGCCAACGCCACGAAACGCATCCATTAATTTGTCATACCTTGCAGGGTGCAACAGATCCGTTGGTGATGGTTCACCAGCGCAACTGAGAT‑CCAAACCGTCTCCTCTGGAAGTGCCGCCATTATTAAAAATAACCATCGTCACCGCCAGGTTATTTCCACaaaaccgtttaat > 2:969754/1‑229 (MQ=255) gTTTGCGCGACTGAATACCGGTGGTTAAAGCATGACGAAGTTCATCTGTCGTGGTGACGTTATAGCCAACGCCACGAAACGCATCCATTAATTTGTCATACCTTGCATGGTGCAACAGATCCGTTGGTGATGGTGCACCACCGCCAATGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGACCCTCCCCGGCAGGGTATCTCGCAAAAACGTTTCAAtttac > 2:850698/1‑237 (MQ=255) cTGAATCCCGGGGGTTAAAGCATGACGAAGCTCATCTGTCGTGGGTACGGTAAGGCCAACGCCACGAAACGCATCCATTAAGTTGTCATACCTTGCATGGTGCAACAGATCCTGTGGTGATGGTTCACCAGCGCCACTGAGAT‑CAACACCTGCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTg < 1:127530/238‑1 (MQ=255) gtggtTAAAGCATGACGAAGTTCATCTGTCGTGGTGACGTTATAGCCAACGCCACGAAACGCATCCATTAATTTGTCATACCTTGCATGGTGCAACAGATCCGTTGGTGATGGTGCACCACCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAAAAACAACCGTCACCGACAGTTTATATCCACAAACCGTTTCAATTTCCATCCCACGCAACCCaaaac > 1:205351/1‑237 (MQ=255) gtTAAAGCATGACGAAGTTCATCTGTCGTGGTGACGTTATAGCCAACGCCACGAAACGCATCCATTAATTTGTCATACCTTGCATGGTGCAACAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGCCACCGCCAGGTTTTATCGCCAAATCATTTCAATTTACATCCCACTAAAACCAAAAGAAca > 2:434415/1‑238 (MQ=255) aaaGCCAGACGGAGTTCATCTGTCGTAGTGACGTTATAGCCAACGCCACGAAACGCATCCATGAATTTGTCATACCTTGCATGGTGCAACAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTTACCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATc < 1:375268/239‑1 (MQ=255) gACGAAGTTCATCTGTCGTGGTGACGTTATAGCCAACGCCACGAAACGCATCCATTAATTTGTCATACCTTGCATGGTGCAACAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGAGGCCGCCATTATTAAAAATAACGAACGTCACCGGCCGGTTTAATCGCCAAACACTTTCAATTTCCATCCCCATAAAACAaaaaaaacaaaaacctaaa > 2:883035/1‑224 (MQ=255) gcggtgttaCGTTATAGCCCACCCCCCGAAACGGATCCATTAATTTGTCAATCCTTGCATGGTGCAACAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGga < 1:334055/231‑1 (MQ=255) tataGCAAACTCCACGAAACGCCTCCATTAATTTGTCATTCCTTGCATGGTGCAACAGATCCGTTTGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGt < 1:337087/238‑1 (MQ=255) aCGCCACGAAACGCATCCATTAATTTGTCATACCTTGCATGGTGCAGCAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAACCGTTTCAATTTCCATCCCACTAAAACACAAAACCCCATCACCCTCACTGGCGACAAcccggaaaacaaaaaaacccaccaa > 2:1061037/1‑216 (MQ=255) aCGCCACGAAACGCATCCATTAATTTGTCATACCTTGCATGGTGCAACAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGga > 1:617303/1‑219 (MQ=255) cGCCACGAAACGCATCCATTAATTTGTCATACCTTGCATGGTGCAACAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGCCAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTAAATGGCGACAACCGGCGACACAGAAGTCCCGccaaa > 1:829607/1‑234 (MQ=255) cACGAAACGCATCCATTAATTTGTCATACCTTGCATGGTGCAACAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCg < 1:216745/239‑1 (MQ=255) aCGAACCGCGTGCATTAATTTTGCATCCCTGCCAGGGTGCAACGAGTCCGTTGGGGCAGCGCCCCCACCGCCACCGAGGT‑CAACCCCGTCCCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGa < 2:829607/239‑1 (MQ=255) aCGCATCCATTAATTTGTCATACCTTGCATGGTGCAACAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCa < 1:1016701/239‑1 (MQ=255) cGCATCCATTAATTTGTCATACCTTGCATGGTGCAACAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGCCGACAACCGGAAAACCAGAAGTCACGCCAGCACCGATGGCac > 1:937465/1‑238 (MQ=255) aTACCTTGCATGGTGCAACAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGCAACCAAAATCACTATCACCTTCAATGGCGACAACCGGGGAACAAGAAGTCAAGCATGAACCGATGGCATACCCAAAACCGCTGccaa > 1:847731/1‑237 (MQ=255) tGCATGGTGCAACAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGCGAACCACAAGGCAACCCAACCCCCAGGCCAAAACCCAAACCGACGCCCaaaaaa > 2:572658/1‑233 (MQ=255) tGCATGGTGCAACAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCAACATCACCTTCAATGGCGACAACCGGTGAACCAAAAACCCCGCCAACCCCGATGGCAAAACCCaacaccgcacccaagaac > 2:1031380/1‑221 (MQ=255) tGCATGGTGCAACAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTAAATTTCCGTCCAACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCCAAGCAAAAGCCCATACCGAAGCCCacaaca > 2:122604/1‑233 (MQ=255) gCATGGTTCAACAGTTCCGTTGGTGATGGTGCCCCAGCGCCACTGAGAT‑CAACCCCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCGTCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT‑GACAcc < 1:122604/239‑1 (MQ=255) gCATGGTGCAAAAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT‑GACAcc < 1:572658/239‑1 (MQ=255) gCAGGGTGCAACGGTTCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACCCCGTCTCCTCTGTAGATGCCGCCATTAGTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT‑GACAcc < 1:969754/239‑1 (MQ=255) aaagggaacgaatattCCGTTTGTGAGGGGTCCCCAGGCCCACTGAAAA‑CAAACCCGTCCCCTTTGTAGATGCCGCCATTATTAAAAATAACGATCGTCAACGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTACAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT‑GACAcc < 2:71768/224‑1 (MQ=255) cATGGTGCAACAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCg < 1:1010401/206‑1 (MQ=255) cATGGTGCAACAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCg > 2:1010401/1‑206 (MQ=255) aaCAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACCCCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT‑GACACCCCAGGTAc < 1:617455/238‑1 (MQ=255) aCAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCCCCCTAGCACCGATGACATAGCCCCAACCGATGCCCAA‑AAAAACCCAGGAAcac > 2:249658/1‑237 (MQ=255) cAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGtctc > 1:154392/1‑50 (MQ=255) cAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGtctc < 2:154392/50‑1 (MQ=255) ccGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGCCAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCACACCCATGCCCCT‑TACACCCCCGGGACCCCAAAcc > 2:982953/1‑239 (MQ=255) ccGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCCCTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGGGACCCACAAATCCCGCAACACCCCAAGGCATAGCCCATACCAAACCCCAT‑GAAAACCCCGGTAcaaaaaaca > 2:969195/1‑231 (MQ=255) ccGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCCT‑GACACCCCCGGAACCACAATcc > 1:246454/1‑239 (MQ=255) ccGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGACGCCAACCGGAGAACCAAAAGACACGCTAGCACCAATGGCCAAACCCAAACCGACGCCCAA‑GACACCCCCGGGACCCCaaaac > 2:135376/1‑236 (MQ=255) ccGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATAACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCCATGCCCAG‑ACCACCCCAGGGACCACAATcc > 1:103436/1‑239 (MQ=255) ccGTTGGTGATGATGCACCAGCGCCACTCAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCAATATCACCTTCAATAGCGACAACCGGAGAACCAGAAGACACCCTAGCACCGATGGCATAGCCCAAACCGAACACCAT‑GAAACCCCAGGAACCaaaacac > 2:208977/1‑236 (MQ=255) ggTGCTGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATTACCTTCAATGGCGTCAACCGGGGAACCAGAAGTACCGCTATCCCCGATGGCATAGCCATAACCGATGCCCAT‑GACACCCCAGGTCCcacctgcctctta > 1:71768/1‑229 (MQ=255) tGGTGCACCAGCGCCCCTGAGAT‑CAACACCGTCTCCTCTGGAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT‑GACACCCCAGGTACCACAATCCAgacgacgac < 1:982953/239‑1 (MQ=255) ggggCACCAGCGCCCATGAGAT‑CAACACCGGTCCCTCTGTAGATGCCGCCATTAATAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT‑GACACCCCAGGTACCACAATCCAgacgacgac < 1:883263/235‑1 (MQ=255) ggTTCACCATCGCCACTGAGAT‑CAACTCCGTCTCCTCTGTAACTGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT‑GACACCCCAGGTACCACAATCCAgacgacgac < 1:434415/238‑1 (MQ=255) ggTGCCCCAGCGCCACTGAGCT‑CAACACCGTCCCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT‑GACACCCCAGGTACCACAATCCAgacgacgac < 1:883035/238‑1 (MQ=255) ggTGCACCAGCGGCACTGAGGA‑CAACACCGGCCCCTCTGTAGATTCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT‑GACACCCCAGGTACCACAATCCAgacgacgac < 1:459506/238‑1 (MQ=255) aCCAGGGCCCCTGAGAC‑CAACACCGTCTCCTCTGTAGATGCCGACATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT‑GACACCCCAGGTACCACAATCCAGACGACGACGTGGt < 1:208977/238‑1 (MQ=255) ccgcCACTAAAAT‑CCACCCCCCCTCCCTTGTAGATGCCGCCATTAATAAAAATACCGATCGTAACCGGCAGGTTATATCGACAAAACGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT‑GACACCCCAGGTACCACAATCCAGACGACGACGTGGTTtata < 2:937465/238‑1 (MQ=255) ccacataagacAACCCCGTCCCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATAACGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTGCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT‑GACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACat < 1:850698/229‑1 (MQ=255) aCTGAGAT‑CAACTCCGTCCCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT‑GACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACatat < 1:969195/239‑1 (MQ=255) aCTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGGCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT‑GACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACatat < 1:249658/239‑1 (MQ=255) ttaaaagagtcacccGTCTCCTTTTTTGATCCCGCCATTTTTAAAAATACCGACCGTCACCGGCAGGTTATAACGACAAATCGGTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT‑GACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACatat < 2:88613/226‑1 (MQ=255) tgtataagaggcagcGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT‑GACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACatat < 1:812238/225‑1 (MQ=255) aT‑CAACCCCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT‑GACACCCCAGGTACCACAATCCAgacgacgac < 1:537718/218‑1 (MQ=255) aT‑CAACCCCGTCTCCGCTGGAGATGCCGCCATTAATAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT‑GACACCCCAGGTACCACAATCCAgacgacgac < 1:790422/218‑1 (MQ=255) aT‑CAACACCGTCCCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGGACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCg < 1:31642/178‑1 (MQ=255) acccccGTTTCCTCTGAAGATGCCGCCATTATTAAAAATAACGGTCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT‑GACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCaataat < 1:986939/233‑1 (MQ=255) cccGTCCCTTCTTTATATGCCGCCATTTTTAAAAATAACCATCGTCCCCGGCAGGTTATAACGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT‑GACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTc < 2:469605/238‑1 (MQ=255) tctcCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACCACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT‑GACACCCCAGGTACCACAATCCAGACAACCACGGGGGTTATACATAACAAAAAAATTTCGGGc > 2:871795/1‑239 (MQ=255) tctcCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACCCTAGCACCGATGGCATAGCCCATACCGATGCCCATAGAC‑CCCCAGGCACCACAATCCAAACCACGACCAGGTTTATAccagcccctaaaacaaaacac > 2:537718/1‑219 (MQ=255) tctcCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTACCACCTTCAATGGCGACAACCCGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT‑GCCACCCCAGGAACCAAAATCCAGACAACACCGCGGGTTATAAAAATCAATAAAATATCGGGc > 2:1084756/1‑239 (MQ=255) ctcctcTGTAGATGCCGCCATTAATAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT‑GACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCa < 1:1031380/239‑1 (MQ=255) | GGTAATATGGCCACTTTCAGTTCCTGCTGCAGGGTCGATGACCACATTAATAATGGTCGGTTTGCGCGACTGAATACCGGTGGTTAAAGCATGACGAAGTTCATCTGTCGTGGTGACGTTATAGCCAACGCCACGAAACGCATCCATTAATTTGTCATACCTTGCATGGTGCAACAGATCCGTTGGTGATGGTGCACCAGCGCCACTGAGAT‑CAACACCGTCTCCTCTGTAGATGCCGCCATTATTAAAAATAACGATCGTCACCGGCAGGTTATATCGACAAATCGTTTCAATTTCCATCCCACTGAAACCAAAAGCACTATCACCTTCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT‑GACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCA > NC_000913/2490287‑2490746 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |