| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,046,443 | A→C | 15.9% | V866G (GTG→GGG) | gcvP ← | glycine decarboxylase, PLP‑dependent, subunit P of glycine cleavage complex |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,046,443 | 0 | A | C | 15.9% | 184.4 / 3.2 | 82 | V866G (GTG→GGG) | gcvP | glycine decarboxylase, PLP‑dependent, subunit P of glycine cleavage complex |
| Reads supporting (aligned to +/- strand): ref base A (45/20); new base C (6/11); total (51/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.24e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGTCGCCGTAAACATCATCCAGACGTTTCACTGTCGGCCAGTATTTGTCTGCCACACCTGCCGGGAATACCGCAACTTCACGGCTGTACGGATGCGCCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATCGAGAATACATTCGTGCGCCACGCGACCGTCGCGACCGGTATACAGCACCGGGAAGGCATCCTGCAGGCGGCTGGCAATATAGTTGGCGTT > NC_000913/3046210‑3046678 | ggTCGCCGTAAACATCATCCAGACGTTTCACTGTCGGCCAGTATTTGTCCGCCACACCTGCCGGGAATACCGCAACTTCACGGCTGTACGGATGCGCCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGCGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCCCGGGTAGCCAGCCTCCGGTCCCTAACGCGATCCCGTTCCACttt > 1:531044/1‑238 (MQ=255) gCCTTAAACCTCATCCAGACGTTTCACTGTCGGCCAGTATTTGTCTGCCACCCCTGCCGGGAATACCGCAACTTCACGGCTGTACGGATGCGCCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCttt < 1:739399/239‑1 (MQ=255) ccGTAAACATCATCCAGACGTTTCACTGTCGGCCAGTATTTGTCTGCCACACCTGCCGGGAATACCGCAACTTCACGGCTGTACGGATGCGCCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCACCGCTCCGTTAAAGCGACCCAGTTCCCCTTTGCttta > 1:353081/1‑238 (MQ=255) cGTAAACATCATCCAGACGTTTCACTGTCGGCCAGTATTTGTCTGCCACACCTGCCGGGAATACAGCAACTTCACGGCTGTACGGATGCGCCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGCCACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCCTCGCGTCGATAAAGCGATCCAGTTCCCCTTTGCTTTCa > 1:983688/1‑239 (MQ=255) atcCAGACGTTTCACTGTCGGCCAGTATTTGTCTGCCACACCTGCCGGGAATACCGCAACTTCACGGCTGTACGGATGCGCCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCCCCTGGGCAATTTCTGCGGGGCAAGCCAGCACCCCGTCGATAAAACGATCCACTTCCCCTTTGCTTTcgaatccctagg > 2:111666/1‑228 (MQ=255) atcCAGACGTTTCACTGTCGGCCAGTATTTGTCTGCCACACCTGCCGGGAATACCGCAACTTCACGGCTGTACGGATGCGCCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCCGGTTATCT‑TCCAGCGGCCAGACCACGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCTCGTCGATAAAGCGCTCCAGTTCCACTTTGCTTTCAGATTCAGTCg > 1:667520/1‑239 (MQ=255) tcCAGACGTTTCACTGTCGGCCAGTATTTGTCTGCCACACCTGCCGGGAATACCGCAACTTCACGGCTGTACGGATGCGCCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGCTAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCgg > 1:25512/1‑239 (MQ=255) aCGTTTCACTGTCGGCCAGTATTTGTCTGCCACACCTGCCGGGAATACCGCAACTTCACGGCTGTACGGATGCGCCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCa > 1:562359/1‑238 (MQ=255) aCGTTTCACTGTCGGCCAGTATTTGTCTGCCACACCTGCCGGGAATACCGCAACTTCACGGCTGTACGGATGCGCCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCCCGTCGATAAAGCGATCCAGTTCCCCTTTGCTTTCAGATTCAGTCGGttaa > 1:705947/1‑236 (MQ=255) cGTTTCACGGTCGGCCAGTATTTGTCTGCCACACCTGCCGGGAATACCGCAACTTCACGGCTGTACGGATGCGCCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCG‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTc < 1:935952/236‑1 (MQ=255) ttCACTGGCGGCCAGTTTTTTTCTGCCCCACCTGCCGGGAATTCCGCAACTTCACGGCTGTACGGATGCGCCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCAt < 1:1067220/239‑1 (MQ=255) tCACTGTCGGCCAGTATTTGTCTGCCACACCTGCCGGGAATACCGCAACTTCACGGCTGTACGGATGCGCCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATc > 1:9753/1‑239 (MQ=255) ggCCAGTATTTGTCTGCCACACCTGCCGGGAATACCGCAACTTCACGGCTGTACGGATGCGCCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCCGACACCGTCTTTCACCTGGTCAATTTCTGCGCGGTTAGCCCGCATCCCGTCTATAAAGCGATCCAGTTCCACTTTCCTTTTGGTTTCACTCGGTTAAAcactcaccgcaa > 2:947892/1‑227 (MQ=255) gTATTTGCCTGCCACACCTGCCGGGAATTCCGCAACTTCCCGGCTGTACGGATGCGCCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCa < 1:811184/239‑1 (MQ=255) tATTTGTCTGCCACACCTGCCGGGAATACCGCAACTTCACGGCTGTACGGATGCGCCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCCCGGATAGCCAGCCTCGCGCCCCTAAAGCGAACCAGTTACACTTTGCTTCCCGATTCAGTCGGTTCAACCACCACCGTACCCGccc > 2:973887/1‑237 (MQ=255) tttGTCTGCCACACCTGCCGGGAATACCGCAACTTCACGGCTGTACGGATGCGCCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCACCGTACCCGCCACCg > 1:248625/1‑239 (MQ=255) ccACACCTGCCGGGAATACCGCAACTTCACGGCTGTACGGATGCGCCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCCCCTGGTCCATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGGGATCCAGTTCCCCTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACgca > 1:313151/1‑237 (MQ=255) aaTACCGCAACTTCACGGCTGTACGGATGCGCCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGCCGGCGCGTg > 1:111198/1‑239 (MQ=255) tccgggttcgcCCCCTCGGGCACCAGTTCCGTCTGAATGTGCGGCCTGTTCACCAGCGGGTTATCT‑TCCAGGGGCCAGACCCCGGCTTTCCCCTGGTCAATTTCGGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCCCTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTTGATCAGgcg < 2:248625/231‑1 (MQ=255) tACGGATGCGCCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCTTCGGCGCGTGGAAACCAGAGCCGACCAGgc > 2:778223/1‑238 (MQ=255) tACGGATGCGCCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAggg > 1:266960/1‑237 (MQ=255) tACGGATGCGCCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCAGCCACCGGGAACGCCATCGTCGGCGCGTGGAAACCGAAGTCGATCAGgc > 1:62942/1‑238 (MQ=255) tACGGATGCGCCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCCTTCCGATTCAATCGGTTCAACCATTCGCGTACCCGCCCCCGGGAACGACATCCGCGGGCGGTGGAAACCGTAGTCGGGCAGgcc > 2:870176/1‑238 (MQ=255) tACGGATGCGCCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGACAGCCAGCATCGCGGCGATAAAGCGATCCCGTTCCCCTTTGCTTTCAGATTCATTCGGGTCAACCCTCAGCTTACCCGCCACCCGGCACGCCAACTCCGGCGCCGGGAAAccccaatgggacaagcg > 2:172491/1‑224 (MQ=255) gcgcCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAGTTTCTGCGCGGATAGCCAGCATCGCGTCGCTAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGCCACCACCGGACCGTGGGAACCGAAGtacaccaaggggtgggca > 2:474467/1‑222 (MQ=255) gcgcCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGTTCAGGCGCTTGGCa > 1:307746/1‑239 (MQ=255) gcgcCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGCCGCGTGGAAACCGCAGCCGATCAGGCGCTTGGCa > 1:1081279/1‑239 (MQ=255) cccccccccgggCGCCCTGTTTGCTCTGAATGTGGGGCGCTTTCACCAGGGGGTT‑TCTCCCCAGCGGCCAGACCCCGGCTTTCCCCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCCCTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTCCCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGc < 2:757385/228‑1 (MQ=255) cccACTCGGCGACCAGGTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATAAGCGTACCCGCCACCGCGAACGACATGGTCGGCGCGGGGAAACCGTAGTCGATAAGGCGCTTGGCAat > 1:620856/1‑238 (MQ=255) cccACTCGGCCACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCCCGTCGATAAAGCGGTCCAGTTCCACTTTGCTTTCAGATTCACTCGGTTCAACCATCAGCGTACCCGCCACCGGGACCAACACCGACGCCCCGTGGAACCCGTCCACGATCCGGCGCTTGGCaaa > 2:661139/1‑237 (MQ=255) ccGGCGACCAGTTCGCTCTGAATGGGCGGCGCGTTCACCAGCGGGTTAGCG‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAg < 1:1005216/238‑1 (MQ=255) ggCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGc > 1:482056/1‑238 (MQ=255) gCGACCGGTTCGCTTTGAATGTGCGGCGGCTTCACCAGCGGTTTATCT‑TCCAGCGGCCAGACCCCGGCTTTCCCCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTc < 1:947892/239‑1 (MQ=255) gTTCGCTCGGAATGGGCGGCGCGTTCCCCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATg < 1:574513/239‑1 (MQ=255) cggcgCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCa > 1:1019921/1‑239 (MQ=255) cggcgCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGGGGAAACCGTAGTCGATCAGGCGCTTGGCAAAATCCAGCCCGCGTATGCCGGTTTCTTCTTTCa > 1:1017787/1‑239 (MQ=255) gcccggtttcccAGGGGGTTTATT‑TCCCGGGGCCAGCCCCGGGTTTTCCACGGTTCAATTTCTGCGCGGATAGGCAGGTCCGCGGAGATAAAGCGATCCAGTTCCCCTGTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTCCCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAg < 2:806816/229‑1 (MQ=255) gcgcGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGc > 1:404550/1‑239 (MQ=255) tCACCAGCGGGTTACCT‑CCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCCCTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTTTTCTTTCAGCGGGCGa < 1:411945/239‑1 (MQ=255) aaggacacattt‑tCCCGCGGCCCGACCCCGGCTTTCCCCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATc < 2:606106/228‑1 (MQ=255) cacggttgcttctacaccGGCCAGACCCCGTCTTTCCCCTGGCCATTTTCTGAGCTGATCGCCAGCATCGCGTCGTAAAAGCGCTCCAGTGCCCTTTTGCTTCCAGATACAGGCTGTTCAACCAGCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATc < 2:472696/222‑1 (MQ=255) gggTTATCT‑TCCAGCGGCCAGACACGGGCATTCACCCGGGCAATTTGTGCGCGGAAAGCCAGCATCGCGTCGATAAAGCGAGCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATc < 1:31674/236‑1 (MQ=255) ggTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGGCCGTGGAAACCGTAGTCGACCAGCCGCCTGGCACTACCCAGCCCCTTGATGCCGGTTTTTTCTTTCACGGGGCGAATACCgaga > 2:870841/1‑239 (MQ=255) ggTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCATACCCGCCACCGGGAGCGACATCGACGGCGCGTGGATACCGTAGTCCTTCAGGCCCTTCGACATATCCAGCTCGCTACTGCCGGTTTCTTCTTTCAGCgagggactaacgcaa > 2:199609/1‑225 (MQ=255) tATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGGGAATATCGAGAATa > 1:966959/1‑239 (MQ=255) aGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATCGAGAATACATTCGt > 1:603696/1‑238 (MQ=255) cGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTGTCTTCTTTCAGAGGGCGAATATCGCGAATACATTCGTgc > 1:701840/1‑238 (MQ=255) gCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATCGAGAATACAt > 1:606106/1‑230 (MQ=255) cTTTCACCTGGTCAATTTCCGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATCGAGAATACATTCGTGCGCCACGCGACCGTc < 1:778223/238‑1 (MQ=255) tCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCCGCGGGCGAATATCCGGAAAAAATTCGGGCGCCCCGCGAccctgcgga > 2:285922/1‑232 (MQ=255) tccctgtctattttcgtggcgGATGGCCCGCCTCGGGGCGTAAAAGGCATCCAGGTCCCCTTTGCTTTCAGACTCGGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATCGAGAATACATTCGTGCGCCACGCGACCGTCGCGAc < 2:996661/221‑1 (MQ=255) tcccTGGTCAATTTCTGCGGCGTTAGCCAGCCTCGGGTCGATAAAGGCATCCGTGTCCCCTTGGTTTCCAGATTCAGCGGGTGCAACCTCCAGCGTACCCGCCCCCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATCGAGAATACATTCGTGCGCCACGCGACCGTCGCGAc < 2:252694/237‑1 (MQ=255) ccccctgTCATTTTCCGGCCGGATAGCCAGCACCGCGTCGATAAAGCCACCCAGTCCCACTTTGCTTTCAGTTTCAGTCGGTTCAACCACCAGGGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATCGAGAATACATTCGTGCGCCACGCGACCGTCGCGAc < 2:1093388/233‑1 (MQ=255) ccccTGGTCAATTTCTGGGGGGGTAGCGAGCAGCGCGGCGATAAAGCGATCCAGTTCCACTTTGCTTTAAGATTCGGGCGGGTCAACCAGCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATCGAGAATACATTCGTGCGCCACGCGACCGTCGCGAc < 2:562359/237‑1 (MQ=255) cACCTGGTCAATTCCTGCGCGGATAGCCAGCAGCGCGTCGATAAAGCGATCCAGTTCCCCTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATCGAGAATACATTCGTGCGCCACGCGACCGTCGCGAc < 1:824114/239‑1 (MQ=255) cACCCGGTCAATTTGCGCGCGGAAGGCCCGCAGCGGGGCGATAAAGCTATACGGGTCCCCTTTGCTTACAGATTGAGGCGGTTCAACAATCAGGGTACCCCCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATAGCCAGCTCGCTGATGCCGGTTTCTGCTTTCAGCGGGCGAATAGCGAGAATACAGTCGTGCGCCACGCGACCGTCGCGAc < 2:212310/239‑1 (MQ=255) ggTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGAGAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGGGGAAACCGTAGTCGATCAGGCGCTTGGCAATATc > 1:777927/1‑157 (MQ=255) gTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAg < 1:1032161/71‑1 (MQ=255) gTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAg > 2:1032161/1‑71 (MQ=255) gTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCCACCATCAGCGTACCCGCCACCGGAAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATAAGGCGCTTGGCACTATCCGGCTCGCGGATCCCGGTTTCTTCTTTCCGCGGGCGAAAATCGGACAACCATTCGTACGCCACGCCACCGTCGCGACAgggaa > 2:984560/1‑236 (MQ=255) gTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATCGAGAATACATTCGTGCGCCCAGCGACCGTCGCGACCGGtat > 1:979044/1‑239 (MQ=255) gTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATCGAGAATACATTCGTGCGCCACGCGACCGTCGCGACCGGtat > 1:404523/1‑239 (MQ=255) caatttcgtgccgGATAGCCAGCAACGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCAACAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATCGAGAATACATTCGTGCGCCACGCGACCGTCGCGACCGGtata < 1:973887/227‑1 (MQ=255) tttcgggccgGATCGCCAGCATCGGGTCGATAAAGGGATCCAGTTCCACTTTGCGTTCAGATTCAGTCGGTTCAACCATCAGCCTACCCGCCACCGGGAACGACAGCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATCGAGAATACATTCGTGCGCCACGCGACCGTCGCGACCGGTATACAGc < 1:984560/231‑1 (MQ=255) cgcgGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCTTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCACCTCGCTGATGCCGGTTCTTTCTTTCACCGTGCGAATATCGAGAGTACATTCGTGCGCCACCCGCCCGTGCCCCCCGGAATACAGCACCgga > 2:222242/1‑238 (MQ=255) cgcgGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATACCGAGAATACATTCGTGGCCCACCCGCCCGCCGCGACCGGAATCCAGCACCcgg > 1:1045455/1‑239 (MQ=255) cgcgGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCATGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCCGCTCGCTGATGCCGGGTTCTTCTTTCAGCGGGCGAATATCGAGAATACATTCTTGCGCCACCCGACCGTCCCGCCCGGAAAAAAGCACCggg > 2:1023956/1‑239 (MQ=255) gATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAAAATTGGGAATACATTCGTGCGCCACGCGACCCCCGCCGCCGGGAAACACCACCGGGAAgg > 2:1033646/1‑239 (MQ=255) aTAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGTTGCCGGTTTCTTCTTTCAGCGGGCGAATATCGAGAATACATTCGTGCGCCACCCGACCGTCCCGCCCGGTATACAGCACCGGGAAGGc > 1:949000/1‑239 (MQ=255) tCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCATGCGCTTGGCAATATCCAg > 1:572032/1‑133 (MQ=255) cgTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGCTTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATCGAGAATCCATTCCTGCGCCACCCGCCCGTCGCGACCGGTATACAGCCCCGGGAAGGCATCCTCCAggcg > 1:1093127/1‑238 (MQ=255) cgTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATCGAGAATACATTCGTGCGCCACGCGACCGTCGCGACCGGTATACAGCACCGGCAAGGCATCCTCCAggcg > 1:535784/1‑238 (MQ=255) ttCGATAAACCTGTCCCGTTCCCCTGTGCTTTCAGATTGACTCGGTTAAACCACTAGCTGACCCGCGACGGGGAACGACATAGTCGGCGCGGGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATCGAGAATACATTCGTGCGCCACGAGACCGTCGCGACCGGTATACAGCACCGGGAAGGCATCCTGCAggcggc < 2:531044/238‑1 (MQ=255) gccGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATCGAGAATACATTCGTGCGCCACGCGACCGTCGCGACCGGTATACAGCACCGGGAAGGCATCCTGCAggcggc < 1:285922/237‑1 (MQ=255) gTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATCGAGAATACATTCGTGCGCCACGCGACCGTCGCGACCGGTATACAGCACCGGGAAGGCATCCTGCAggcggc < 1:1033646/239‑1 (MQ=255) gTCGAAAAAGCGATCCAGTTCCACTTTGCTTGCAGATTCAGCCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATCGAGAATACATTCGTGCGCCACGCGACCGTCGCGACCGGTATACAGCACCGGGAAGGCATCCTGCAggcggc < 1:111666/239‑1 (MQ=255) tgcataaacgctcccAGTGCCACTTGGCTTTCAGATCCAGCCGGTTCACCCATCAGGGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATCGAGAATACAGTCGTGCGCCACGCGACCGTCGCGACCGGTATACAGCACCGGGAAGGCATCCTGCAGGCGGCt < 2:523042/226‑1 (MQ=255) gtgaaaagggggtCCAGTTCCCCTTTGTTTTCAGATCCAGGCGGTTCACCCATCAGCGTCCCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATCGAGAATACATTCGTGCGCCACGCGACCGTCGCGACCGGTATACAGCACCGGGAAGGCATCCTGCAggcggc < 2:404523/226‑1 (MQ=255) cgtaaaaggcttCCAGTCCCACTTGCGTTTCAGGTTGCGTCGGTTCACCCAGCAGCGTACCCGCCACCGGGAACGACATCGGCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATCGAGAATACATTCGTGCGCCACGCGACCGTCGCGACCGGTATACAGCACCGGGAAGGCATCCTGCAGGCGGCt < 2:25512/227‑1 (MQ=255) tCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATCGAGAATCCATTCGTGCGCCACGCGACCGTCGCGACCGGTATACAGCACCGGGAAGGCATCCTCCAGGCCGCGGGCAACTTAGtt > 1:478970/1‑239 (MQ=255) ttCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATCGAGAATACATTCGTGCGCCACGCGACCGTCGCGACCGGTATACAGCACCGGGAAGGCATCCTGCAGGCGGCGGGCAATATAGTTGGCGt > 1:932443/1‑239 (MQ=255) tCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATCGAGAATACATTCGTGCGCCACGCGACCGTCGCGACCGGTATACAGCACCGGGAAGGCATCCTGAAGGCGGCTGGCAATATAGTTGGCGtt > 1:191932/1‑239 (MQ=255) aCTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGt > 1:1042047/1‑82 (MQ=255) | GGTCGCCGTAAACATCATCCAGACGTTTCACTGTCGGCCAGTATTTGTCTGCCACACCTGCCGGGAATACCGCAACTTCACGGCTGTACGGATGCGCCCACTCGGCGACCAGTTCGCTCTGAATGTGCGGCGCGTTCACCAGCGGGTTATCT‑TCCAGCGGCCAGACACCGGCTTTCACCTGGTCAATTTCTGCGCGGATAGCCAGCATCGCGTCGATAAAGCGATCCAGTTCCACTTTGCTTTCAGATTCAGTCGGTTCAACCATCAGCGTACCCGCCACCGGGAACGACATCGTCGGCGCGTGGAAACCGTAGTCGATCAGGCGCTTGGCAATATCCAGCTCGCTGATGCCGGTTTCTTCTTTCAGCGGGCGAATATCGAGAATACATTCGTGCGCCACGCGACCGTCGCGACCGGTATACAGCACCGGGAAGGCATCCTGCAGGCGGCTGGCAATATAGTTGGCGTT > NC_000913/3046210‑3046678 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |