| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,825,217 | G→T | 10.6% | Q137K (CAA→AAA) | spy ← | periplasmic ATP‑independent protein refolding chaperone, stress‑induced |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,825,217 | 0 | G | T | 10.6% | 388.7 / 2.4 | 136 | Q137K (CAA→AAA) | spy | periplasmic ATP‑independent protein refolding chaperone, stress‑induced |
| Reads supporting (aligned to +/- strand): ref base G (52/65); new base T (16/2); total (69/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.01e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.20e-01 | |||||||||||
Only 100 of 137 total aligned reads displayed.
ACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAGCGGCGGACGTTTCATCTGGTCACGCTGGCCTTTCATGATTTCGCGGATCTGCTGTTTCTGCGCGT > NC_000913/1824980‑1825450 | ccggggggtgtttacgggCAACTGGGTTGTTTTAGGTTAGTGGTGATGGGGTTTTTTTAACACTTGTTGGAAAAGAAAAAAAAAA‑CCCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGc < 1:1200880/223‑1 (MQ=255) cGTGGATGGTTATCGGCAACTCGGGTGATTGACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGAAGTGGACAAGACCGCGGGCTCTTCGGTTTTTTCG‑TTAAGGATTATTTAGCAGGTGGAGGGACTTTCTCTTTTTGCCCTGGGCGTTCTGTTAA‑ACCCTCCTCAAAAATA‑G‑A‑AATAAAATTCtt > 2:825722/1‑239 (MQ=255) aTGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGCCAAGACCG‑GCGGTCTTAAGTTTTTTTGCTGAAAGATTTTTTAGCCGTTTCAGGCATTTTACCTTTTTCGCCCGGAGGTTCTGTCCG‑AGCGTTTTCCAAATTA‑G‑C‑ATTCAATTGtttttttt > 1:1275387/1‑237 (MQ=255) gttcgcgaactgggggttgtttACGTGTGTGGTGATCGTGTTTTTTTAACATCTTTGAGAGAAGAAAAAAAAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGtt < 1:1355270/219‑1 (MQ=255) gacacgtggtggATTTGCTTTGGTGGTGATCGGTTTTTTTTTACACGTGTTAGAGAAGAAAAAAAAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGt < 2:40510/228‑1 (MQ=255) cTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTTAAGGTTTTTTGCTGAAAGATTATTTAGCAGTTGCCGGCATTTTACCTTTTTCCGCTGGACGTTTTTTTAG‑ACCCGTCTCAAAATTA‑GAC‑TTTAAATttttttttttttctgccggcacg > 2:136085/1‑224 (MQ=255) cTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGGCTTAAGTTTTTTGGCTGAAAGATTATTCCGCCGGTGCAGGCATTTTTCCTTTTTCCGCTGGACGGTCTGTCAG‑AAGCCTCTCAAAATTATG‑A‑TTTAATTTGCTTTTTTTTTTCCgggccagg > 2:1114894/1‑233 (MQ=255) tACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGAATATTCAGCAGTTGCAGGCCTTTTACCTTTTTCCGCCGGACGTTTTGTCAG‑ACGCTTCTCAACATTA‑G‑C‑ATTAAATTTCTTTTTTTTTTTCGCCGGCAGGAGGTT‑GTaaaa > 1:1357860/1‑238 (MQ=255) tACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGCCTTAAGTTTTTTTGCCGAAAGATTATTCAGCAGTTTCAGGCCTTTTACCTTTTGCCGCTGGACGGTCTGTCAG‑AAGCTTCTCCAAATTA‑T‑C‑CTTTAATTTCTTTTTCTGTTCCGGCGTCAGGTGTTT‑GTaaaa > 1:1240299/1‑238 (MQ=255) tgttttgacttgtttttttttACATTGGTTGGAAAAAAAAAAAAAAA‑CCCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGtt < 2:1098981/225‑1 (MQ=255) tggtgATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTTAAGTTTTTTTGCTGAAAGATTATTCAACAGTTTCCGGCCTTTTACCCTTTTCCGCTTGGAGTTTTGTCAT‑ACGCGTCTCAAAATTA‑G‑C‑ATTAAATTTCTTTTTTTTTTCCGGCGCCGGGCTGTT‑GTAAAtttttt > 2:1095947/1‑234 (MQ=255) tggtgATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTTAAGTTTTTTGGCTGGAAGAGTATTCAGCAGTTGCAGGCATTTTACCTTTTTCCGCTGGGAGTTTTGTCAG‑ACGGTTCTCAAAATTA‑G‑C‑ATTAAATTTCTTTTTCTGTTTCGGCGTCAGGAAGTT‑GTAAATTTTGt > 1:951036/1‑236 (MQ=255) ttttttttACAATTGTTTGAAAAAAAAAAAAAAACACCGCCCATCCTGTCCACCTCATTACTGGAAGGTAGTGGACAAGACCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCAt < 2:816048/238‑1 (MQ=255) tttttttACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCATCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTTAAAGTTTTTGCCTGGAAGATTATTCATCGCTTGGAGGCATTTTATCTTTTTCCGCAGGCGGTTTTTTTAG‑ACGATTGCCCAAATTA‑T‑C‑ATTAAATTGCTTTTTCTGTTCCTGCGCCAGGAGGTT‑TTACATTTTGTGTT‑GGGGTTcctgtt > 2:741709/1‑235 (MQ=255) ttttagaaaaagaaaaaaaaa‑aCCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGt < 1:1065352/226‑1 (MQ=255) ttgaaaaaaaaaaaaaaaaaa‑cCCGCCGATCCTGTCCCCCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGt < 2:159469/226‑1 (MQ=255) tttGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTTTAGTTTTTTTGCTGAAAGATTATTCAGCAGGTGGAGGGATTTTTACTTTTTCCGCTGGACGGTTTTTCAG‑AAGCTTCTCAAAATTA‑A‑CAATAAAATTTCTTTTT‑TTTTTTGGCGGCAGGATGTT‑GTAAAATTTTTTTT‑GGGGTTTCAtttggggccccatggta > 2:1006902/1‑226 (MQ=255) tGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTTAAGTTTTTTTGGTGAAAGATTATTCAGCAGTTGCAGGCATTTTATCTTTTTCCGCCGGACGTTCTGTCAT‑GAGCGTCTCAAAATTT‑G‑C‑ACTAAAATTCTTTTTTTTTTTCGGGGGCCGGAGTTT‑GTAAAATTTGTTCT‑GGGttttccttttggcccccaatttg > 2:146550/1‑217 (MQ=255) tGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGCAGTGGACAAGACCG‑GCGGTCTTAAGTTTTTTAGGTGAAAAATTATTCCGCAATTGCACGCATTTTACCTTTTTGCGCTGGACGGTCTTTCAG‑ACGCTTCCCCAAATAA‑G‑C‑ATTAAATTGGTTTTTTTTTTCCGGGCTCCGGTTTTT‑TATAATTTTTTTTT‑GGGGTTCCCTTGGGGCCCGCATTTTAgg > 2:1336437/1‑238 (MQ=255) agaaaaAAGAAA‑TCCGGCGGTCCTGTCCACCGGATTTCGGCAAGGTGGTGGACAAGACCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTgc < 2:32856/239‑1 (MQ=255) aagaaaagaaa‑CCCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTgcg < 1:330609/238‑1 (MQ=255) aaaaaaaaaaa‑aCCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTTAAGTTTTGTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTgcg < 1:1174510/236‑1 (MQ=255) ccTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCg < 1:278358/238‑1 (MQ=255) ctttCCCCCGCATTACTGCAAGGTAGTGGACAAGACCG‑GGGGTTTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGAt < 2:1228476/236‑1 (MQ=255) cTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGAt < 1:1095947/239‑1 (MQ=255) gTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTTAAGTTTTTTTGCTGGAAGATTATTCAGCAGGTGCAGGCCTTTTACCTTTTTCCGCTGGACGGTCTGTCAA‑ACGCTTCTCAAAAATA‑A‑C‑CATTAATTTCTTTTTTTTTTCCCGCGTCCTGTGGTT‑TTAAAATTTGTTTT‑GGGGTTTCCTGTTCCCCAGCAAGGTAGCTTTTCCGTTTTTTTCCCtttttttggttt > 2:921162/1‑232 (MQ=255) tcccacGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTg < 1:1336437/234‑1 (MQ=255) cGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTTTTAAGTTTTTTGGCTGAAAGATTATTTCGCAGTTGGAGGCATTTTACCTTTTTTCGCTGGGAGGTCTTTCCG‑ACGCTTTTCAAAATTA‑A‑C‑CTTTAATTGCTTTTTCTGTTCCTGCGGCCGGGGGTTGGTAAATTTT‑TTCT‑TGGTTTTCCTTTGGGCCCGCCGGTTAGCTTTGCGCTGTTTTTTCAtttttttggtatggggt > 2:691631/1‑226 (MQ=255) cGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTTAAGTTTTTTTGCTGGAAGATTATTTAGCAGTTGCAGGCCTTTTTCCCTTTTCCCCCGGACGTTCTTTCCG‑ACGCTTTTCAAAATTA‑G‑A‑CTTTAATTGCTTTTTTTGTTCCCGCGTCCGGATGTT‑TTAAATTTTGTTTT‑TGGTTTTCCTTTTCGCCAGCCTTTTGACTTTTGCCTGTTTTTCCATTTTTTCGATTTGCGCt > 2:582178/1‑238 (MQ=255) cGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATTTGCGCCAGCATGTTAGCTTTTCGCTGTTCTTCCATTTTTTCGGTCtcggct > 1:1114478/1‑233 (MQ=255) cGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGCCTTTTGTTTTTTGGGTGAAAGGTTATTCAGCAGATGGAGGCATTTTTCCTTTTTCCGCTGGCCGGTCTGTCAG‑ACACTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTTTGTTTCGGCGTCAGGGTGTT‑GTAAATTTTTTTTT‑GGGTTTTCATTGTCGCCCGCATGTTAACTTTGAGCTGTTTTTCCATTTTTTTGATCTgcggt > 2:932770/1‑236 (MQ=255) gCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTc < 1:574006/239‑1 (MQ=255) tACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCCTTTTACCTTTTTCCGCTGGACGTTCTGTTAA‑ACGCTTCTCCAAATTA‑G‑C‑ATTTAATTGCTTTTTTTGTTCCGGCGTCAGGATGTT‑GTAAATTTTTTTTT‑GGGTTTTCTTTTGGGCCCGCATGTTAGCTTTGCGCTGTTTTTCCATTTTTTCGATTTGCGCTTCCGCt > 2:471777/1‑239 (MQ=255) cTGCAAGGTAGTGGACAAGACCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTTCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGGTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTTCATTTTTTCGGTCTGCGCTTCAGCttt > 1:753614/1‑239 (MQ=255) aaGGTAGTGGACAAGGCCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACt < 1:541928/239‑1 (MQ=255) tAGTGGACAAGACCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCAttttt < 1:850627/211‑1 (MQ=255) tgTGGACAAGACCG‑GCGGTCTTAAGTTTTGTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCGGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTAt < 1:435126/237‑1 (MQ=255) tGGACAAGGCCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGa < 1:471777/239‑1 (MQ=255) tGGACAAGACCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTTTCAAAATTA‑G‑C‑ATTAAATTGCCTTTTTTGTTCCGGCGTCAGGATGTT‑GTAAACTTTGTTCT‑TGGTTTCCATGTCGGCCAGCATGTTAGCTTTGCGCTGTTCTTCCCTTTTTTCGATTCTCCCTTCCCCCTTTACTTTTTcta > 1:1043413/1‑237 (MQ=255) tGGACAAGACCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGGTGCAGGCATTTTACCTTTTTCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTTAATTGCTTTTTTTGTTCCGGCGTCAGGGTGTT‑GTAAATTTTGTTTT‑TGGTTTTCCTTTGCGCCCGCCTGTTTGCTTTTGGCTGTTTTTTCCTTTTTTCGACTTGCGCTTCACTTTTTACTTTTTCGa > 2:1124232/1‑239 (MQ=255) tGGACAAGACCG‑GCGGTCTTAAGGTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGCTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTTTGTTCCGGCGTCAGGATGTT‑GTAAATTTTTTTCT‑GGGGTTCCATGTGCGCCAGCATGTTAGCTTTTCGCTGTTCTTCCATTTTTTCGGTCTGCGCTTCCGCTTTTACTTTATCGa > 1:744947/1‑239 (MQ=255) gACAAGACCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGcc < 1:451964/173‑1 (MQ=255) aaGACCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTTT‑GGGTTTTCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTTCGATCTGCGCTTCAGCTTTTACTTTTTCGAAGGt > 1:309303/1‑238 (MQ=255) gACCG‑GCGGTCTTAAGTTTTTTTGCTGAAAGATTATTTAGCCGGTGCACGCATTTTACCTTTTTCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTTAATTTATTTTTTTTTTTCTGCGTCAGGAGGTT‑GTAAATTTTGTTTT‑TGGTTTCCCTTTTTGCCAGCCTGTTAGCTTTTGGGTGTTTTTCCTTTTTTTCGATCTGCCCTTCCGCTTTTTTTTTTTCGTAggatt > 2:347021/1‑235 (MQ=255) gACCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCCTGTGCGCCATACTGTTACCTTTTGGCTGTTTTTCCATTTTTGCGATTTGCGCTTCAGCTTTTTCTTTATTGAAGGAAt > 1:162436/1‑238 (MQ=255) gACCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGAAGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTTCTTTTTCTGTTCCGGCGTCAGGATGTT‑TTAAATTTTGTTCT‑GGGTTTCCCTTTGGGCCAACATGTTAAGTTTTGGCTGTTGTTCCATTTTTTTGGTCTTCGTTTTCGCtttttattttttcaaggtta > 1:1320472/1‑222 (MQ=255) gACCG‑GCGGTCTTAAATTTTTTTGCTGAAAGATTATTTAGCAGTTGCAGGGATTTTTCCTTTTGCCCCTGGACGTTTTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGTTTTTTTTGTTTCGGCGGCTGGAGGTT‑GTTAATTTTGTTTT‑GGGTTTCCTTTTTCGCCAGCATGTTAGCTTTGTGCTGTTTTTCCCTTTTTTCGGTTTGCGCTTCACCTTTTCCttttttgtagggttc > 2:302938/1‑227 (MQ=255) cg‑gcggTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCt < 1:1122507/239‑1 (MQ=255) tCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCaa < 1:136085/238‑1 (MQ=255) ctttatttttttGGTGTAAAGTTTATTCAGCAGTTGTAGGCATTTTTCCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCTGCAGGATGTT‑GTAAATTTTGTTCG‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAatg < 2:1378050/233‑1 (MQ=255) cTTAAGTTTTTTTGCTGAAAGATTATTCAGCAGGTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCGG‑ACGATTCTCAAAATTA‑T‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAatg < 1:664586/239‑1 (MQ=255) cTTAAGTTTTTTGGCTTAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAatg < 1:932770/239‑1 (MQ=255) cTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTTTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAatg < 1:582178/239‑1 (MQ=255) cTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAatg < 1:146550/239‑1 (MQ=255) cTTAAGGTTTTTGGCTGAAAGGTTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAatg < 1:1085637/239‑1 (MQ=255) gTTTTTTTGTTTAAAGATTATTAAGCGGTTGCAGGCATTTTACCTTTTGCCGCTGGCCGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTTTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTc < 2:1124079/239‑1 (MQ=255) tttGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGCTGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGGCagga > 2:535468/1‑236 (MQ=255) tttGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTTTTCCATTTTTGCGGTCTGCGGTTCAGCTTTTACTTTATTGAAGGTATCGTTGCCAaagattcatagc > 2:739890/1‑232 (MQ=255) tttGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTG‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAGGGGATCCCTGGCAATGATGTccg > 1:1378050/1‑235 (MQ=255) gAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAatg > 1:317871/1‑223 (MQ=255) gAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTAATGCATTgtgc > 1:220052/1‑239 (MQ=255) gAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTGCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAatg < 2:317871/223‑1 (MQ=255) tattCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGACTTCATGCATTGCGCGGGGt > 2:1064551/1‑237 (MQ=255) attCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTAGGCTTTTACTTTATCGAAGGCATCGCTGGCAATGAGGTCATCAATTGCGCGGCGttc > 2:605415/1‑238 (MQ=255) ttCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAatg > 1:1210286/1‑214 (MQ=255) ttCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAatg < 2:1210286/214‑1 (MQ=255) agTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCATTGATGTCATTCATTTCGCGGGGTTTTTCCAgcg > 2:1048620/1‑239 (MQ=255) agTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAgcg > 2:311373/1‑239 (MQ=255) tGCAGGCATTTTACCTTTTGCCGCTTGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAgcggcg < 1:50946/239‑1 (MQ=255) tGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAgcggcg < 1:344191/239‑1 (MQ=255) gCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGtt > 2:1360695/1‑104 (MQ=255) cATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAGCGGCGGACGt < 1:125595/238‑1 (MQ=255) tttACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAgcggcg > 1:1100620/1‑230 (MQ=255) tttACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAGCGGCGGACGTTTCa > 1:1371900/1‑239 (MQ=255) tttACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAGCGGCGGACGTTTCa > 1:789797/1‑239 (MQ=255) tttACCTTTTGCCGATGGACGTTCTGGCGGTACG‑TTCTCAAAATTA‑G‑C‑ATTGAATTGGTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTTCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAGCGGCGGACGTTTCa < 1:888338/239‑1 (MQ=255) ttttGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAGCGGCGGACGTTTCATCTGGt < 1:1006902/239‑1 (MQ=255) tttGCCGCTGGACTTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCTGGGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAGCGGCGGACGTTTCATCTGGt < 1:141695/239‑1 (MQ=255) tcccttGGTCGTTCTGTCAG‑ACTCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAGCGGCGGACGTTTCATCTGGTCACg < 2:1240299/234‑1 (MQ=255) cTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAGCGGCGGACGTTTCATCTGGTCACGCTg > 1:141157/1‑238 (MQ=255) tGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAGCGGCGGACGTTTCATCTGGTCACGCt < 1:527137/236‑1 (MQ=255) tCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTGAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAatg > 2:570097/1‑174 (MQ=255) tCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAGCGGCGGACGTTTCATCTGGTCACCCTGGCCTTTCAt > 2:445967/1‑239 (MQ=255) gTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCCCGGCGTTCTTCCAGCGGCGGCCCTTTCTTCTGGTCACGCTGGCCTTTccggct > 2:527137/1‑234 (MQ=255) cGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAGCGGCGGACGTTTCATCTGGTCACGCTGGCCTTTCATGATTTcg < 1:1066807/237‑1 (MQ=255) cTTTTCAAAATTT‑G‑C‑TTTTAATTTGTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAGCGGCGGACGTTTCATCTGGTCACGCTGGCCTTTCATGATTTCGCGGa < 2:1306381/239‑1 (MQ=255) ttCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAGCGGCGGCCGTTTCATCTGGTCACGCTGGCCTTTCATGATTTCGCGGa > 1:631651/1‑238 (MQ=255) tctcAAATTTT‑G‑C‑ATTAAATTGTTTTTTCTGTTCCGGCGTCAGGATGTT‑GGAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAGCGGCGGACGTTTCATCTGGTCACGCTGGCCTTTCATGATTTCGCGGATc < 2:1155205/239‑1 (MQ=255) ctcAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAgcggcg > 1:327651/1‑194 (MQ=255) ctcAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAGCGGCGGCTGTTTCATCTGGTCACGCTGGCCTTTCATGATTTCGCGGa > 1:236752/1‑236 (MQ=255) ctcAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAGCGGCGGACGTTTCATCTGGTCACGCTGGCCTTTCATGATTTCCCGGa > 1:1306381/1‑236 (MQ=255) tA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCtt < 2:1116975/117‑1 (MQ=255) tA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCtt > 1:1116975/1‑117 (MQ=255) tA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAgcggcg > 2:166811/1‑186 (MQ=255) tA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAgcggcg < 1:166811/186‑1 (MQ=255) g‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAGCGGCGGACGTTTCATCTGGTCACGCTGGCCTTTCATGATTTCGCGGTTCTGCTGTTTCTg > 1:853415/1‑239 (MQ=255) agtaTTAAATTGCTTTTTCCTGTCCGGGGTTAGGATTTT‑TTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCATCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGTAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAGCGGCGGACGTTTCATCTGGTCACGCTGGCCTTTCATGATTTCGCGGATCTGCTGTTTCt < 2:789797/236‑1 (MQ=255) c‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTg < 2:1027456/109‑1 (MQ=255) c‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTg > 1:1027456/1‑109 (MQ=255) tAAATTGCTTTTTCCGTTCCGGCGTCAGGATTGT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAGCGGCGGACGTTTCATCTGGTCACGCTGGCCTTTCATGATTTCGCGGATCTGCTGTTTCTGcgcg < 1:691631/239‑1 (MQ=255) | ACCGTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAA‑ACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCG‑GCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAG‑ACGCTTCTCAAAATTA‑G‑C‑ATTAAATTGCTTTTTCTGTTCCGGCGTCAGGATGTT‑GTAAATTTTGTTCT‑GGGTTTCCATGTGCGCCAGCATGTTAGCTTTGCGCTGTTCTTCCATTTTTGCGATCTGCGCTTCAGCTTTTACTTTATCGAAGGTATCGCTGGCAATGATGTCATGCATTGCGCGGCGTTCTTCCAGCGGCGGACGTTTCATCTGGTCACGCTGGCCTTTCATGATTTCGCGGATCTGCTGTTTCTGCGCGT > NC_000913/1824980‑1825450 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |