| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,008,412 | A→T | 14.6% | T46S (ACC→TCC) | yedE → | UPF0394 family sulphur transport domain‑containing inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,008,412 | 0 | A | T | 14.6% | 204.7 / 3.5 | 80 | T46S (ACC→TCC) | yedE | UPF0394 family sulphur transport domain‑containing inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (30/36); new base T (11/2); total (41/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.38e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TAACTATTATTTTTGTGAATTATTACCCCGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATG‑ATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCAGCCGTATCCGCATTATGCAGGCCATCATTGGCGGCATTATCGCCGGTTTTGG > NC_000913/2008178‑2008650 | tAACTATTATTTTTGTGAATTATTACCCCGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGGTTTTTCTCTACTTACTATTTTGGCATTACTGGGACCCTTTTGGCTGT‑CCCGGGGGAATTTAcc > 1:541557/1‑237 (MQ=255) aCTATTATTTTTGTGAATTATTACCCCGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAACCACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGCTATATTCTCTACTTACTATTTTGGCCCTACTGGGACCTTTTGGGATGT‑CACGCGTGAATTTAgccagt > 1:1016897/1‑236 (MQ=255) ttttTGATTTTTTCCCCCGAAAATAAATTTGCATGGTGTATGATTCGCGCCTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGcc < 2:1232085/239‑1 (MQ=255) tttGTGAATTATTACCCCGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTAGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGcc < 1:1113054/239‑1 (MQ=255) gtgAATTATTACCCCGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGc < 1:476261/239‑1 (MQ=255) aaTTATTCCCCCGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTcc < 1:573413/239‑1 (MQ=255) attattACCCCGAAAATAAATTTGCATGGTTTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTcc < 1:934194/238‑1 (MQ=255) aaaaTAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTTCTAATTTTGCATTACTGGCACCCTTTTGGCTGT‑GACGGGGGAAATTTCCCCTTTGGGGGGCCCGCTCCTGGAACttgtccg > 1:148229/1‑233 (MQ=255) aaaaTAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGGATTCTCTCTACTTACTATTTTTGCCCTCCTGGCACCTTTTTGGCTGT‑CACGGGGGAATTTTACCGTTTGGGGGGCCACCTCCTGCAACAGTTCgg > 1:678804/1‑239 (MQ=255) ttaattttgcttgtgttttgtttCGCGACTCTTTTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGAAGCAATTCAAACCCGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGt < 2:678804/218‑1 (MQ=255) ataaatTTGCTTGGTTTTTGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGt < 2:905059/239‑1 (MQ=255) actgtttGAATGGTGTATTATTCGAGACTTTTTTTTCAAACCTTCTGAGTTCAGAGGCTAATTTCTTGACATGGCAGCAATTCAACCACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGt < 2:295563/234‑1 (MQ=255) agacaggTGTATGATTCGCGACTTTTGTTTCAAACCTTCTGGGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCt < 1:1125657/234‑1 (MQ=255) gCATGGTGTATGATGCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTTATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTg < 1:836285/239‑1 (MQ=255) cATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCa < 1:438805/209‑1 (MQ=255) acgtgggtATGATTCCGGACTTTTGTTTCAACCCTTCGGAGGTCAGAGGCTAAATTCATGCCACGGCAGCAATTCAAACACGACTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCAGTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTg < 2:181011/232‑1 (MQ=255) ttttttttttCGGGGCTCTTTTTTCAAACCGTTTGGTTTCAGAGGCTACATTCATGTCATGGCAGCATTTCAAACCCGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAagag < 2:541557/231‑1 (MQ=255) tgtttttttCGCTACTCTTGTTTCAACCCTTCTGAGTTCAGAGGCTACTTTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAagag < 2:940828/231‑1 (MQ=255) gtATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGt < 1:631206/238‑1 (MQ=255) tATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGGATTTTCTTCACTTACTCTTTTGGCATTACTGGCACCTTTTGGGTTGT‑CACGGGTGAATTTACCCGTTGGGGCGGGCAGCCCCTGCAACTGTTTGGCGTCCATGCTGaaacttg > 1:295563/1‑233 (MQ=255) gttttgctttttttGTTTCAAACCTTTGGAGTTCAGAGGCTAAATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGt < 2:368971/227‑1 (MQ=255) gtttctggACTTTTGTTTCAACCCTTCTGAGTTCAGGGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGt < 2:881395/232‑1 (MQ=255) cgcgACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGGATTCTCTCTACTTTCTATTTTGGCATTACTTGCACCTTTTGGGCTGT‑CACGGGGGAATTTTACCGTTGGGGGGGCCCGCTCCTGCAACTGTTCTGGGTCCCACCTGGAGAAGGGGGTGACt > 1:1121791/1‑239 (MQ=255) gcgTCTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCCCTTATTACTATTTTTCGCTTTCTGGCCCCCTTTGGGCTGT‑CAAGGGGGAATTTACCCCGTTGGGCGGCCACCTCTCCCACCTGTTTTCGGGCCCTGCTGAAGAggggggggcgtt > 2:1139712/1‑233 (MQ=255) gcgACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTTTCTTTCCTTACTATTTTTTCATTACTTGCTCCTTTTGGGCTGT‑CACGGGGGAAATTACCCCTTTGGGGGGCCAGCTCCTGCAACTGTTTTGGGGCCATGCTTACGAACGGGGTTAAtt > 1:1290016/1‑239 (MQ=255) gcgACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTTTCTCTACTTACTATTTTGGGCTTACTGGCACCTTTTGGGCTGT‑CACGGGGGGATTTTCCCCTTGGGGCGGCCAGCTCCTGCAACTGGTCGGCGTCCATGCTGaaagatgggggtaatt > 1:501366/1‑225 (MQ=255) gcgACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTTTTTACTTACTATTTTGGAATTAATCGCACCCTTTGTGCTGT‑CACGGGTGAATTTTCCCGTTTTGGGGGCCACATCCTTCAACCGGTCGGCGTCCATGCTGaaatatggggggtg > 1:181011/1‑225 (MQ=255) gcgACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTTGCATTACTTGCCCCTTTTTGGCTGT‑CACGGGGGAATTTTCCCCTTTGGGCGGCCAGGCCCTGCAACTGTTCGGCGTCCATGCTGGAGAGTGGGGTTACtt > 1:930073/1‑239 (MQ=255) gcgACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTTGCATTACTGGCACCTTTTTGGGTGT‑CACGGGTGAATTTTCCCCTTGGGGCGGCCAGCTCCTGCCACTGTTTGGCGGCCATGCTGGAGCGTTGGGGTAAtt > 1:1095061/1‑239 (MQ=255) gcgACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTTGGCTGT‑TACCGGTGGATTTTACCCTTTGGGCGGCCCGACCCTCGAAATGTTTGGCGTCCCTGCTGAAGAGTgggggtcttt > 1:940828/1‑233 (MQ=255) gcgACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGGATTCTTTCTACTTACTATTTTTGCATTACTGGCACCTTTTGGGCTGT‑CCCTGGTGAATTTTACCGTTGGGGCGGCCAGGTCCGTTAACCGTTCGGCGTCCACGCTTGAGAGGGGGGTTAcct > 1:633974/1‑237 (MQ=255) gcgACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGGATTCTCTCTACTTACTATTTTTGCATTACTGGCACCTTTTTGGCTGT‑CACGGGGGAATTTACCCGTTGGGGGGGCCCGCCCCCTCCACTGTTCGCCGTCCCTGCTGAAGAGGGGGGGTGCtt > 1:368971/1‑239 (MQ=255) tttttCAAACCTTTTGGGTTAGGAGGTTTAATTCTTGTCATGGGAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTa < 2:633974/237‑1 (MQ=255) tttCAAACCTTTTGTGTTCAAGGGCTACATTCATGTCATGGCCACAATTAAAACCCGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATc < 2:1105501/239‑1 (MQ=255) tttCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGt < 1:262300/224‑1 (MQ=255) tttCAAACCTTCAGAGTTACGAGGCTACATGAATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATc < 1:1139712/239‑1 (MQ=255) aaCCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTTTCTCTACTTACTATTTTGGCATTACTGGGACCCTTTGGGCTGT‑CCCGGGGGAAATTACCCGTTTGGGCGGGCCGCTCCTGCAACTGTTCGGCGTCCATGCTGGAGAGTGGGGGTACTTTTAAAATATCCATCt > 1:1105501/1‑239 (MQ=255) tCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGGATTTTCTCTTCTTACTTTTTTTGCATTACCGGCACCTTTTTGGGTGT‑CACGGGGGGATTTTCCCCTTGGGGGGGGCCGCCCCCTCCACCTTTTGGGGCCCCTGCTTGAGAGGGGGGGTACTTTTAAAtatcgtcttttttaa > 2:262300/1‑225 (MQ=255) gAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACCCGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGAt < 1:1283799/239‑1 (MQ=255) ttCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGt < 1:786580/195‑1 (MQ=255) cgtttatggaggaaaTTCAAACCCGCGTGGTTGATTAAATTCGGGGCCCCCATCCCTGGGGTCATCGCGGCGGGTTTTCTCCCTACTTTCTTATGTGGCATTACTGGCACCTTTTGGGCTGA‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGGCCATGCTGAAGAGTGGGGTTACGTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGa < 2:1290016/226‑1 (MQ=255) atgtcatgGCACCAATTCAAACCCGCCTGGTTTGTTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGa < 2:930073/239‑1 (MQ=255) ggCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGGATTCTCTCTTCTTACTATTTTTGCATTACTGGCACCCTTTGTGCTGT‑CACGGGTTGATTTACCCGTTGGGGGGGCCCGCTCCTGCAACTGTTTCGCGGCCATGCTGTGGGGGGGGGGGACTTTtaaa > 2:786580/1‑195 (MQ=255) gCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCa < 1:225697/201‑1 (MQ=255) aaaTTCTGGGCCCCCATCCCGGGGGTTATCGGGGCGGGTTTTCTCTCCACTTACTGTTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGACAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTAAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATG‑ATCCTCGGTATGTTTGGCGGCTGCtt < 1:414447/239‑1 (MQ=255) tgCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCCCCACTTCTCACATTTGCAGTACTTGACACTTTTGGGCGGT‑CACGGGAGAATTTACTCGCCGGGGTGGCTGGCTCCAGCTACTGTTCTGCGGCCATGCTGGTCGGTGGGGGGACTTACAAATTATCTTTCTGTAGGGTTTCCCATTTTACCGCCTGTATCGGATGCTG‑TTCCTCGGTGGCTTTGGGGCGTGCttttctctgc > 2:414447/2‑232 (MQ=255) ggCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTTTTTTGGCATTACTGGCACCTTTTTGGGTGT‑CCCGGGTGAATTTTCCCGTTTGGGCGGCCCGCCCCTGCCACTGTTTGGGGGCCCTTCTGTAGAGGGGGGTTCCCTTTAAATTATCCCTCTGGAAGGGTCCCCCTTAAACCCCAACCACCGGAAGAAGAATCCTCGGAAT‑TTTGGGGGCCGCcttttcgccg > 2:581494/1‑232 (MQ=255) cccATCCCTGCGGTCATCGCGGCGGGGATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGGGAATTTACCCGTTGGGGCGGCCCGCTCCCTCAACTGTTCGGCGTCCCTGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTTGAAGGATCGCCATTAAACCGCATCGACGGGGTGATG‑ATCCTCGGTATCTTTGGCGGCTGCTTTGCCCCCgcgcc > 1:758284/1‑238 (MQ=255) ccACCCCGGCGGTCATCGGGGCGGGTATTCTCCCTACTTACTATTTTGGCATGACGGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATG‑ATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCtg < 1:561190/239‑1 (MQ=255) aTCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCCTTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTTGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGt > 1:1013154/1‑129 (MQ=255) aTCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGt < 2:1013154/129‑1 (MQ=255) ctACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGGTACTTTAAAATTATCAATCTGGAAGGATCGCACTTAACCCGCATCGACGGGTTGATG‑ATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCACGGCTTGGGGCCAACAATTTCAAACTGGACATGCCgcgc > 2:339824/1‑239 (MQ=255) ttttttctttttgGGGATTACTGGCACCTTTTGGG‑TGTGCCCGGGTGAATTTCCCCGTTGGGGCGGCCACCCCCTGAAACGGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATG‑ATCCTCGGTATGTTTGGCGGCGGCTTTGCCGCAGCGCTGTGGGCCAACAATTTCAAACTGCGAATGCCGCGCa < 2:1321585/230‑1 (MQ=255) acttactATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATG‑ATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCa > 1:1233511/1‑238 (MQ=255) acttactATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATG‑ATCCTCGGGATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCa > 1:622616/1‑238 (MQ=255) cttactATTTTGGCATTACTGGCCCCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATG‑ATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCcaa < 1:599904/211‑1 (MQ=255) actactTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATG‑ATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCACCCgc > 1:951032/1‑238 (MQ=255) actATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATG‑ATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCAGCCga > 1:1086996/1‑238 (MQ=255) actATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATG‑ATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCAGCCGt > 1:1082042/1‑239 (MQ=255) actATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATG‑ATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCAGCCGt > 2:913880/1‑239 (MQ=255) actATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCCCATCGACGGGATGTTG‑ATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATTCCCAACTCCGAATGCGTCGCACCCGt > 1:1075533/1‑239 (MQ=255) ttttttGGGTTTACTGGCCTCTTTGGGGTGGC‑CACGGGTTAATTTTCCGGTTGGGGCGGCCAGCCCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATG‑ATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCAGCCGTAt < 2:1086996/237‑1 (MQ=255) ttgtttGGCATTACGTGCACCTTTTGGGCTGT‑GACGGGTGAATTTACCCGGTGGGGGGGGCAGCTCCTGCAACTGTTCGGCATCCATGCTGAAGGGGGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATG‑ATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCAGCCGTAt < 1:655660/236‑1 (MQ=255) tATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATG‑ATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCAGCCGTAt < 1:194915/239‑1 (MQ=255) tttcGGCATTCCTGGCCCCTTTTGGGCTGT‑TACTGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCg < 2:1087526/141‑1 (MQ=255) tttGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGa < 2:1365403/146‑1 (MQ=255) tttGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGa > 1:1365403/1‑146 (MQ=255) tttGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATG‑ATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCAGCCGTAt < 1:973453/236‑1 (MQ=255) tttGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATG‑ATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAAATGCGAATGCCGCGCAGCCGTAt > 2:973453/1‑236 (MQ=255) ttgCATTCCTGGCCCCTTTTGGGGTTG‑CCCGGGTGAATTTACCCGGTGGGGCGGCCAGCTCCTGCAACTGTTCGGGGTCCATGCTGAAGAGGGGGGTTACTTTAAAATTAGCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATG‑ATCCTCGGTATGGTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCAGCCGTATCCGCa < 2:1095061/237‑1 (MQ=255) tGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATG‑ATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGACAAACTGCGAATGCCGCGCAGCCGTATCCGCa > 1:872188/1‑239 (MQ=255) aCTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCAATTAACCCGCATCGACggg > 1:1087526/1‑141 (MQ=255) ttGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATG‑ATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACCATGTCAAACTGCGAATGCCGCGCAGCCGTATCCGCATTATg > 1:455010/1‑226 (MQ=255) ttGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATG‑ATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCAGCCGTATCCGCATTATGCAGGCCATCATTg > 1:126846/1‑239 (MQ=255) ggCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATG‑ATCCTCGGTATGTTTGGCGGCTGCTTTTCCGCAGCGCTGTGGGCCAACAATGTCAAACTTCCAATGCCGCCCAACCGTATCCGCATTATGCAGGCCACCATTggcg > 2:374014/1‑239 (MQ=255) gT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATG‑ATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCACCAATGTCAAACTGCGAATGCCGCGCAGCCGTATCCGCATCTTCCAGGCCATCATTGGCGCCAt > 1:1250212/1‑239 (MQ=255) gT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATG‑ATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCAGCCGTATCCGCATTATGCAGGCCATCATTGGCGGCAt > 1:632783/1‑239 (MQ=255) gT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATG‑ATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCAGCCGTATCCGCATTATGCAGGCCATCATTGGCGGCAt > 1:1293747/1‑239 (MQ=255) gT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATG‑ATCCTCGGTATGTGTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCAGCCGTATCCGCATTAAGCAGGCCATCATTGGCGGCaa > 1:795906/1‑238 (MQ=255) gtgtATTTTCCCGTTGTGGCGGCCAGCCTCTGCAACGGTCCGGGCTCCAGTCTGAAGAGGTGGGTTCCTTGAAAATTCTCCATCGGGAATGATCGCCATTAACCCGCAGCGACGGGATGATG‑ATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCAGCCGTATCCGCATTATGCAGGCCATCATTGGCGGCATTATCGc < 2:601860/238‑1 (MQ=255) aCCCGTTGGGGCGGCCAGCTCCTGAAACTGTTCGGCGTCCATGCTGAAGAGTGGGGGTACTTTAAAATTATCACTCTGGAAGGATCGCCATTAACCCGCATCGACTGGATGATG‑ATCCTCGGTATGTTTGGCGGCTACTGTGCCGCACCGCTGTGGGCCAACAATGTCAAACGGCTAATGGCGCACAGCAGGAACCGCATTCTGCAGGACACAATTggcggccgtaagccagggtttgg > 2:1072381/1‑222 (MQ=255) | TAACTATTATTTTTGTGAATTATTACCCCGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGT‑CACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATG‑ATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCAGCCGTATCCGCATTATGCAGGCCATCATTGGCGGCATTATCGCCGGTTTTGG > NC_000913/2008178‑2008650 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |