| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,098,141 | T→C | 14.0% | E54G (GAG→GGG) | wzzB ← | regulator of length of O‑antigen component of lipopolysaccharide chains |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,098,141 | 0 | T | C | 14.0% | 248.8 / 8.7 | 101 | E54G (GAG→GGG) | wzzB | regulator of length of O‑antigen component of lipopolysaccharide chains |
| Reads supporting (aligned to +/- strand): ref base T (46/40); new base C (2/13); total (48/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.58e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 | |||||||||||
Only 100 of 102 total aligned reads displayed.
GTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTT‑TCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTACTCTCATC‑ATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAA > NC_000913/2097904‑2098373 | gTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTT‑TCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGA‑CAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTtct > 2:418786/1‑237 (MQ=255) tAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTT‑TCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTa < 1:687372/239‑1 (MQ=255) aTTTCTGGTTTTTAACAGGAGGTTTGATGGTAAAGTTT‑TCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAAGGCAGAGAAGGCAGAACTGAAGCGAACAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACt < 2:899044/239‑1 (MQ=255) ttGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTT‑TCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCACACGCCGGGCTGATTGATAATTGCTGTTA‑ACGACCATTTCC‑CCTTCGCTACt > 2:370540/1‑238 (MQ=255) gttttaaaggacaggAAGGTTCGGTGGTAAGTTTT‑TCTCGGTCTACCTGATTTTCCAGCGTTTCTGCTAATGCAGAGCAGGCCGAACGGAAGCGACCAATTAAC‑GTCTCCCGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGcc < 2:1003453/225‑1 (MQ=255) gCTGTTTTTTAACAGAAGTTTCGATGGTAAGTTTT‑TCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGcc < 2:765983/239‑1 (MQ=255) cTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTT‑TCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGA‑CAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCaa < 1:418786/239‑1 (MQ=255) tgttttttAACAGAAGGTTCGTTGGTAAGTTTT‑TCCCGTTCTTCCCGATTTCCCCGCTGTTCCGCAAAGGCAAGGAAGGCAGAACTGAAGCGACCAATTAAC‑GTCTCCGGCAAATCCGATTCTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCaa < 2:191471/233‑1 (MQ=255) tGGTTTTTTAAAGAAGGTTCGATGGTAAGTTTG‑TCGTGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGGCCAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCaa < 2:447597/239‑1 (MQ=255) ggTTCTTAACAGAAGGTTCGATGGTAAGTTTT‑TCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGGCCAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTTCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTCCTGCCaaa > 1:448944/1‑239 (MQ=255) ggtttttaCAAAAGCTTCGGGGGTAAATTTTCTCTCTTCTTTCCTG‑TTCGCCCGCTTTTCTGCCAATTAAGGGAAGGCAGTACTGAAGCGACCAAGTAGC‑GTCTCCTGTAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCCCGTCGGGCTGAGTGATTATTGCTTTTG‑ACGTCCATTTCC‑CCTTCGCTACTGCCAAat < 2:1129615/232‑1 (MQ=255) gTTCTTAACAGAAGGTTCGATGGTAAGTTTT‑TCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGTTTTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCaaaa > 2:350907/1‑238 (MQ=255) gTTCTTAACAGAAGGTTCGATGGTAAGTTTT‑TCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCGGAGGGTGAATGACTTTTG‑ACGTCCATTTTC‑CCTTCgtacctcgcaaaa > 1:658736/1‑227 (MQ=255) tAACAGAAGGTTCGATGGTAAGTTTT‑TCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCa < 1:977573/239‑1 (MQ=255) tAACAGAAGGTTCGATGGTAAGTTTT‑TCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCa < 1:368635/239‑1 (MQ=255) gAAGGTTCGATGGTAAGTTTT‑TCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCa < 2:336058/234‑1 (MQ=255) gAAGGTTCGATGGTAAGTTTT‑TCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCa > 1:336058/1‑234 (MQ=255) aaGGTTCGATGGTAAGTTTT‑TCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGATGGATAATTGCTGTTT‑ACGTCCATTTCT‑CCTTCCCTACTGCCAAATATCCAATAGcc > 1:1349146/1‑239 (MQ=255) aaGGTTCGATGGTAAGTTTT‑TCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAAAAGcc > 1:122754/1‑239 (MQ=255) aGGTTCGATGGTAAGTTTT‑TCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAAC‑GTCTCCTGCAAATCCGATACTTGCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGc < 1:1018913/237‑1 (MQ=255) aGGTTCGATGGTAAGTTTT‑TCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAAC‑GTCGCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCa < 1:95661/239‑1 (MQ=255) aGGTTCGATGGTAAGTTTT‑TCCCGTTCTTCCTGATTAACCAGCGTTTCTTCAAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGc < 1:580993/237‑1 (MQ=255) ctgtGGTAAGTTGT‑TCCCGTTCTTTCCGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAATCGCCCAATTAAC‑GTCTCCTGCAAATCCGATACGTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGGCGGGCTGAGTGATAATTGCTGTTG‑AAGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCa < 1:317904/236‑1 (MQ=255) ggTAAGTTTT‑TCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCaa > 1:1003453/1‑224 (MQ=255) t‑tCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCCCTCCTGCCAAATATCCAAAAGCCAGGGCAAAAA‑CCACaaaaa > 2:1309222/1‑236 (MQ=255) t‑tCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTACCCCACGTCGGGCTGAGTGATAATTGCCGTTG‑ACGTCCATTTCT‑CCTTCGCTACTCCCAAATATACAATAACCAGGGCAATAC‑CCACAA‑AGa > 2:607229/1‑239 (MQ=255) t‑tCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAAATAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGa < 1:1056947/239‑1 (MQ=255) ttccttgtttcccAGCTTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAatga < 2:1349146/228‑1 (MQ=255) ttcCTGTTTACCCTGCCTTTCCGCTAATGAAGAGAAGGCAGAACTGAAGCGACCAATAAAC‑GTCCCTTGCAAATCCGATGATTTCGGTGAAGCCTGACCATAGCTAACATTCATGGCATTGTTATAGCCAGCAATTTTCCCCACTTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTCCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAatga < 2:765427/239‑1 (MQ=255) gATTAGCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACCGAAGCGAACAATTAAC‑GTCTCCTGCAAATCCGATACTTACGGTACAGCCTGACCATAGATAACATGCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTT‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATGATGAtt < 1:1321631/239‑1 (MQ=255) gTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATGATGATTGTCATCTTgcc > 1:122768/1‑239 (MQ=255) ttCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATAAAGATTGTAATCTTgccac > 2:1123167/1‑239 (MQ=255) cttcTAAGGCAGAGAAGCCAAAACTAACGGGCCCAATTAACTGTC‑CCTGCAAACCCGATTCTTTGGGGCCAGCTTGACCATAGATAACATTCTTGGAATTGTTATGGCCAGCAATTTCCCCCCCGGCGGGTGGAGTGATAATTGTGGTGG‑ACGTCCATTTCT‑CCTTCGCTACTGCAAAATATCCAATGGCCAGGGCAATAG‑CCAAAA‑TGAGGGAAATGATGATTGTCATCTTgccacgc < 2:1117364/236‑1 (MQ=255) cTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAAC‑GTCTCCTGCAAATCCGATACTATCGATGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAAATTGCCCCACGTCGGGCTGAGCGATAATTGCTGTTG‑ACGTCAATTTCT‑CCTACGGTACTGCCAACAATCCAATATCCAGGGCCAAAA‑CCACCA‑TGACGGAAAAGATGATTGGCACATTcccacg > 2:458345/1‑238 (MQ=255) cAGAGAGGGCAGCACTGAAGCAACCAATTACC‑TTCCCCTGCAAATCCGATTCTTGCGGTGCAGCTTGCCCAAAGATAACATGCATGGTATTGTTAGAGCCAGCATTTTGCCCCCCGCGGGGCTGAGTGATAATTGTTGTTG‑ACGCCCTTTTCT‑CCTTCGCTACTGCCAAATCCCCAATACCCAGGCCAATAG‑CCAAAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGc < 2:27435/239‑1 (MQ=255) gaAGGCAGAACTGAAGCGACCAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATCACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGTCTTAGTGATGATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCCGGGCAATAG‑CCACAC‑TCACGGCAACCACTTTTTTTATCTTGCCACCCCCCAACTACCCTa > 2:614701/1‑239 (MQ=255) gaAGGCAGAACTGAAGCGACCAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATACATATTGTCATCTTGCAACGCCACAAcagaacaa > 2:1300800/1‑232 (MQ=255) cAGAACTGAAGCGAACAATTAAC‑GTCTCCTGCAAACCCGATACTTTCGGTGCAGCCTGACCATGAATACAATTCATGGAATTGTTAGAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTATTGCCAAATATCAAATAGCCAGGGAAATAG‑CCACAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTaa < 1:1309222/238‑1 (MQ=255) aaGCGACCAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGATATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTA‑ACGTCAATTTCT‑CCTTCGCTACTGCCAAATAGCCAATATCCAGGGCACTAG‑CCCCAC‑GGTCGGTAATAATGACTGCCATCTTGCAACCCCACAACTGAACTAGTaaatcacacaa > 1:860369/1‑234 (MQ=255) accGACAATTTAAT‑GTTCCCTTCAAATCCGTTACTTTGGGGGCAGCCTGACCAAAGAAAACATTCATGGCTTTTGTAAAGCCAGCATTTTTCCCCACGTGGGGCTGAGTGAAAATTGCTGTTG‑AGGTCCATTTCT‑CCTTCGCTACTGCAAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTaaatcaatcaaa < 2:216805/237‑1 (MQ=255) aCCAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTaaatcaatcaaatcaa > 1:1225556/1‑239 (MQ=255) aCCAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGCCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCCCAA‑TGACGAAAATGATGATTGTCATCTTCCAACCCCAAAACCGCAATAGAaaaaaaaccaaataaa > 2:418802/1‑239 (MQ=255) ccAATTAAC‑TTTCCCTGCAAAGCCGATCCTTGCGGGGCAGCCTGCCCAAAGATAACATTCATGGCATTGTTATGGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑CCGTCCATTTCC‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGAAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTaaatcaatcaaatcaat < 1:1286249/239‑1 (MQ=255) ccAATTAAC‑GTCTCCTGCAATTCCAATACTTTGGGTGCAGCCTGCACATAGATAACATTCATGTGTTTTTTATAGCAAGAAATTTCCCCCACGTGGGGGTGAGTGAAAATTGCTTTTG‑ACGTCCATTTCC‑CCTTCGCTACTGCCAAATACCCAAACGCCAGGGCAATAG‑CCAAAA‑TGACGAAAATGATGATTTTCATCTTGCCACGCCACAACTGCACTAGTaaatcaatcaaatcaat < 1:1338818/239‑1 (MQ=255) aacgctcccTGAAAATCCGATACTTTCGGTGCAGCCTGACCAAAGATAACATTCAGGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATGGCTGTTG‑ACGTCCATTTCT‑CTTTCGCTACTGCAAAATATCAAATAGCCAGGGCAATAG‑CCAAAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTc < 1:212436/232‑1 (MQ=255) tcCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAT‑CCACAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCCAACCTGCACTAGTAAATCAATCAAATCAATCCGTTCCgggcc > 2:212436/1‑237 (MQ=255) tcCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAC‑TGACGGAAATGATGATTGTCATCTTGCCTCGCCACAACTGCAATAGTAAATCAATCAAAACAAACTGTTCCGGGTc > 2:1100381/1‑239 (MQ=255) tcCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTc > 1:398025/1‑239 (MQ=255) ccTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAAACAAATCAATCGTTTCCGGGTCa > 2:600999/1‑239 (MQ=255) aattgtatatttgaggTGCAGCGTGACCATAGATAGAATTAATGCCTTTGTTATAGCCAGTAATTTGCCCCACGTGGGGGTGGGTGAATATTGCTGTTG‑CAGTCCATTTCT‑CCTCCGCCACTGCAAAATTGCCAAGAGCCAGGGCAATAG‑CAACAA‑TGACGGAAATGATGATTGTCATCTGGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGttt < 2:209570/225‑1 (MQ=255) aTACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAACTCAATCTTTTCCGGGCCATGGTTTTCCCCa > 2:847837/1‑239 (MQ=255) ccTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTTTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGGGATAATTGCTGTGG‑ACGTCCATTCCC‑CCTCCGCTACTGCAAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGa < 1:1300800/238‑1 (MQ=255) ccATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTat > 1:1183116/1‑238 (MQ=255) gagaaatatcttcaaTGGCATTGTTAAAGCCGGCATTTTGCCCCCGGTCGGGCTGAGTAAAAATTGCTGTTG‑ACGCCAATTTCT‑CCTTGCCTACTACAAAATTTCCAATCCCCAGGGAAATAG‑CCACAA‑GGACGGAAATGATGATTGTCATCTTCCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTAct < 1:1172316/225‑1 (MQ=255) aaTAGATAACATTCAGGGCATTTTTATAGCCAGCAATTGGCCCCACGTCGGGCTGAGTGATAATTGCTTGTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATGATGATTGTCATTTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTAct < 1:1116152/238‑1 (MQ=255) atagtaacattttgtGGCATTTTTAAACCCAGCAATTGCCCCCAGGTCGGGCGGAATGATAATTGCTTTTA‑CCGTCCATTTCC‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGAAAATAG‑CCACAA‑TGACGAAAATGATGATTGTCATTTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTActc < 1:563882/225‑1 (MQ=255) taaaTAACATTCGTGGTATTTTTATAGCCAGCAATTTCCCCCCCGTCGGGCTGAGTGATAATTGCTTGTG‑GCGTCAATTTCT‑CCTTCGCTACTGCCAAATACCCAATAGCCAGGGCAATAG‑CCAAAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTActct < 1:600999/236‑1 (MQ=255) gATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCCGAAACATTATTATTTTCTACtctc > 1:701267/1‑238 (MQ=255) aaTAACATTCATGGCATTTTTATACCCAGCAATTTCCCCCGCGGGGGGCTGAGTAATAATTGCTGTTG‑ACGTCCTTTTCT‑CCTCCGCTACTGCAAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGAAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTActct < 1:849320/236‑1 (MQ=255) aactttaagggaaTTGTTAAAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATACCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTACTCtcatc‑a < 1:847837/227‑1 (MQ=255) aaCCTTAATGGATTTGTTAAAGCAAGAAATTTGCCCCACGCCGGGCTGAGTAATAATTGCTGTTG‑ACGCCCATTCCT‑CCTTCGCTACTGCCAAATACCAAATGGCCTGGGAAATAG‑CCACAA‑TGACGAAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTACTCtcatc‑a < 1:350907/239‑1 (MQ=255) aaCATTCAGGGCATTGTTATACCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGTTGTAG‑ACGCCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGCCAATCG‑CCACAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTACTCtcatc‑a < 1:74511/239‑1 (MQ=255) cATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGCAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGGTTTGCCCAGAAACATTATTATTTTTTACTCTCATC‑Att > 1:283542/1‑239 (MQ=255) cATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTACTCTCATC‑ttt > 1:801281/1‑239 (MQ=255) aTTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTACTCTCATC‑Att > 1:1120927/1‑238 (MQ=255) aTTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGGAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCAAGAAACattatta > 1:669147/1‑220 (MQ=255) cATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTACTCTCATC‑ATTAccc > 1:990071/1‑239 (MQ=255) aTGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAC‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCCATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTTATTTATACTCTCATC‑ATTACCCt > 2:783301/1‑239 (MQ=255) aTGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATGATGCTTGGCATCTTGCCACGCCACAACTGCACTAGTAAATCACTCAAATCAATCTGTTCCGGGCCATGGTTTTGCCCAGAAACATAATTATTTTCAACTCTCACA‑ATAAccca > 2:155611/1‑238 (MQ=255) ttGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGCAACATTATTATTTTCTACTCCCATC‑ATTACCCTAAATg > 2:1036965/1‑238 (MQ=255) tGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGCCGGAAATGATGATTGTCATCTTGCCCCGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGACCTGGTTTTGCCCAGAAACATTATTATTTTCTACTCTACTC‑CTTACCACAACttcc > 2:468396/1‑236 (MQ=255) ataGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCCGGGCAATCG‑CCACAA‑TGACGGGAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATAAATCCTTTCCGGGACAGGGTTTTGCCCCGAAACATTATTATTTTCTATTCCCATC‑ATTACCCTAAATGACGGaa > 2:176783/1‑239 (MQ=255) catcagtttCCCCCCCGTGGGGCTGGGTGATATGTGCTGGTG‑ACCACATTTTCC‑ACTTCACTCCGGCAAAATATCCATGGGCCAGGGAAATAA‑CCAAAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTACTCTCATC‑ATTACCCTAACTGACGGAAATTTc < 2:205977/233‑1 (MQ=255) aGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGCGTCATGGTTTTGCCCAGaaa > 1:618106/1‑191 (MQ=255) cAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACt > 1:386437/1‑62 (MQ=255) cAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACt < 2:386437/62‑1 (MQ=255) cAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAAACTGTTCCGGGTCATGGTTTTGCCCCGAAACATTATTATTTTCTACTCTCATC‑ATTACCCCAAATGACGGAAATTTCCaa > 2:79572/1‑239 (MQ=255) cAATTTCCCCCACGTCGGGCTGAGTGATAATTGCTGTTC‑ACGTCCATTTTT‑CCTTCGCTACTGCCAAAGATCCAATAGCCTTGGCAATAC‑CCACAA‑TGACGCTAATGACGATTACCATCTTCCCCCTCCACAACTAACCTAGTAAATCAATCAAATCACACTGTTCTTGGTCATGATTTTACCCAGAAACATTATAATTTTCCACTCACAAC‑ATAACCCAAACAAAAGGAAAATTCCaa > 2:584318/1‑239 (MQ=255) ccccACGGCGGGTTTATTTATAAGTGCTTTTG‑ACGCCCATTCCC‑CCTTGCCTACGCCAAAATAGCCAATGCCCAGGACAAGAC‑CTACAA‑TGGCGGAAATGATGATTGTCTTCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTACTCTCATC‑ATTACCCTAACTGACGGAAATTTCCAAGTCCGCa < 1:617034/239‑1 (MQ=255) ccccACGGCGGGTGGATGGATAATGGCTGTTG‑ACGTCCTTTTCC‑CCTTCGTATCTGACAAATTTCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATGATGATTGCCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCACAGAAACATTATTATTTTCTACTCTCATC‑ATTACCCTAACTGACGGAAATTTCCAAGTCCGCa < 1:458345/239‑1 (MQ=255) cccccgcggagCTGAGAGATAATGGCTGTTG‑CCGTCCATTTCT‑CCTTCGCTACTGCTAAATATCCAATTACCGGGGCAATAG‑CCACAA‑TTACGGAAATTATGATTGGCATCTTCCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTACTCTCATC‑ATTACCCTAACTGACGGAAATTTCCAAGTCCGCa < 1:1036965/228‑1 (MQ=255) ccccccgtgggggtgggttaaaTTGCTGGTGCACTCCCTTTTCC‑CCTTGGCTACTGCAAATTACCCAACACCAGGGGCAATAG‑CCAAAA‑GGAGGAAAATGATGATTTGCATTTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTACTCTCATC‑ATTACCCTAACTGACGGAAATTTCCAAGTCCGCa < 2:780001/219‑1 (MQ=255) cgccGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCTCTACTGCCAAATATCCAATAGCCAGGGCAATAA‑CCACAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAGTCAAACAAATCAATCTGTTCCGGGTAATGGTTTTGCCCCGAAACATTATAATTTTC‑AATTTCAACAATAACCCTAACTGACGAAAATTTCCAAGTcccaatattt > 2:240621/4‑231 (MQ=255) aGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTACTCTCATC‑ATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTACCGATaa > 2:579564/1‑238 (MQ=255) gttaTAAGTGGTGTTT‑GCGTCATTTTCT‑CCTTCGATATTCACAATATTCCATGCCCCGGGGCAATAG‑CCACAAGTGA‑GGAAAATATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGTTCATGGTTTTGCCCAGAAACATTATTATTTTCTACTCTCATC‑ATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATc < 2:658736/236‑1 (MQ=255) gggATAATTGCTGTTG‑TCGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATCGTCCGGGCAATAG‑CCACAA‑TGACGGATATTATGATTTTCATCTTGCCACGCCACTTCTGCACTCGTAACTTAATCCAATCAAACTGTTCCGGGTCATGTTTTTGCCCACAAACATTATTCTTTTCTACTCCCATC‑ATTACTCTAACTGTCGGAAATTTTCAAGTccacctctttttaccaaaaa > 2:626584/3‑220 (MQ=255) aaTTGCTGTTG‑ACGTCCTTTTCC‑CCTTCGCTACTGCCAAATATCCAAGAGCCAGGGCAAGAG‑CCACAA‑TGACGGAAATGATGATTGTCTTCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTACTCTCATC‑ATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGt < 1:1081725/239‑1 (MQ=255) ttgttgTGG‑ACGTCTATTTCT‑CCTTCGCTACTGCCAAATTCCCAATCGCCGGGGCAATCG‑CCAAAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTACTCTCATC‑ATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGa < 1:176783/239‑1 (MQ=255) ttttttttgccttcttttttT‑CCTTCCCTAC‑GGCAAAAATCCAAAAACCCGGGCAAAAGCCCAAAA‑TGGCGAAAATGATTATTTCCATCTGGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTACTCTCATC‑ATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGa < 2:122754/223‑1 (MQ=255) tgcttgtG‑ACGTCCTTTTCC‑CCTTCGCTATGGCCAAATTCCCAAGGCCCAGGACAATAG‑CCACAA‑TAGCGAAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTACTCTCATC‑ATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGaa < 1:370540/233‑1 (MQ=255) tGCTTTTG‑CCGTCCATTTCC‑CCTTCGCTCCTGCAAAATCTCCAATAGCCAGGGAAATAG‑CAACAA‑TGACGGAAAGGATTATTTTCAACTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTACTCTCATC‑ATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGaa < 1:517195/239‑1 (MQ=255) tGCTTTTG‑ACGTCCATTTCT‑CCGTCGCTACTGCCAAATATCCAATAGCCAGGGAAATAG‑CCAAAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCATAAACATTATTATTTTCTACTCTCATC‑ATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGaa < 1:1123167/239‑1 (MQ=255) gtcTGTGG‑ACTTCCTTTTCT‑CCTCCGCTCCTGAAAAATATCCAAAGGCGAGGGAAAGAG‑CCACAA‑TGACGTAAAGGAGGATTGTCATCTTCCCACGCCACAACTGCACTAGTAAAGCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTACTCTCATC‑ATTACCCTAACTGACGGAAAGTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGaa < 2:701267/237‑1 (MQ=255) gggtgtgaacgggcgtttCC‑CCTTCGCTACTCAAAAATACCCAATAGCCAGGCCAATAG‑CCAAAA‑TGACGGAAATGATGATTGCCATCTTGCCACGCCACAACTGCACTAGTAAAGCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTACTCTCATC‑ATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGaa < 1:155611/224‑1 (MQ=255) gCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGGAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATAATTATTTTCTACTCTCATC‑ATTACCCTAACTGACGGAAATTTCCAAGTCCGCAAAGTTAACCGAAAAACCTCGTGaaa > 2:517195/1‑238 (MQ=255) gCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTACTCTCATC‑ATTACCCTAACTGCCGGAAATTTCCAAGTCGCCATAGTTTAACGATAACCCCCGGGaaa > 2:1186603/1‑238 (MQ=255) gCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTACTCTCATC‑ATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGCGAAt > 1:1044479/1‑239 (MQ=255) tgttttggccgccctttCTCCCTTCCATACTGCAAAATTTCAAAAAGCCAGGGAAATAC‑CAAAAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTACTCTCATC‑ATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGaa < 2:655171/225‑1 (MQ=255) ttG‑CCGTCAATTTCT‑CCGTCGCTCCTGCCAAATATCCAAGAGCCAGGGCAATAG‑CCAAAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTACTCTCATC‑ATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCta < 1:1186603/239‑1 (MQ=255) cATTTCT‑CCTTCGCTACTGCCAAATATCCAATATCCAGGGCAATAG‑CCACAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTACTCTCATC‑ATTACCCTAACTGACGGAAATTTCCACGTCCTCACAGTTTAGCGATAATCCTCGTGAATGCTATAGGTTaa > 2:231694/1‑239 (MQ=255) | GTCAATGGTAATTGCTGGTTCTTAACAGAAGGTTCGATGGTAAGTTTT‑TCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAGAAGGCAGAACTGAAGCGACCAATTAAC‑GTCTCCTGCAAATCCGATACTTTCGGTGCAGCCTGACCATAGATAACATTCATGGCATTGTTATAGCCAGCAATTTGCCCCACGTCGGGCTGAGTGATAATTGCTGTTG‑ACGTCCATTTCT‑CCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAG‑CCACAA‑TGACGGAAATGATGATTGTCATCTTGCCACGCCACAACTGCACTAGTAAATCAATCAAATCAATCTGTTCCGGGTCATGGTTTTGCCCAGAAACATTATTATTTTCTACTCTCATC‑ATTACCCTAACTGACGGAAATTTCCAAGTCCGCATAGTTTAGCGATAATCCTCGTGAATGCTATAGGATAA > NC_000913/2097904‑2098373 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |